RNA–Protein interactions for RNA: ENST00000397223.4

FOXRED2-203, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-203ENST00000397223 NEFLP07196 543 aa23.39■■□□□ 1.33
FOXRED2-203ENST00000397223 CABP2Q9NPB3 220 aa23.37■■□□□ 1.33
FOXRED2-203ENST00000397223 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
FOXRED2-203ENST00000397223 PANK3Q9H999 370 aa23.37■■□□□ 1.33
FOXRED2-203ENST00000397223 AMOTL2Q9Y2J4 779 aa23.36■■□□□ 1.33
FOXRED2-203ENST00000397223 KNDC1Q76NI1 1749 aa23.35■■□□□ 1.33
FOXRED2-203ENST00000397223 DLC1Q96QB1 1528 aa23.35■■□□□ 1.33
FOXRED2-203ENST00000397223 ANP32CO43423 234 aa23.34■■□□□ 1.33
FOXRED2-203ENST00000397223 CPS1P31327 1500 aa23.33■■□□□ 1.33
FOXRED2-203ENST00000397223 TECPR2O15040 1411 aa23.33■■□□□ 1.33
FOXRED2-203ENST00000397223 RBM33Q96EV2 1170 aaKnown RBP23.33■■□□□ 1.32
FOXRED2-203ENST00000397223 PER1O15534 1290 aaPredicted RBP23.32■■□□□ 1.32
FOXRED2-203ENST00000397223 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
FOXRED2-203ENST00000397223 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
FOXRED2-203ENST00000397223 SLC12A5Q9H2X9 1139 aa23.31■■□□□ 1.32
FOXRED2-203ENST00000397223 KCNA6P17658 529 aa23.31■■□□□ 1.32
FOXRED2-203ENST00000397223 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
FOXRED2-203ENST00000397223 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
FOXRED2-203ENST00000397223 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
FOXRED2-203ENST00000397223 DIP2AQ14689 1571 aa23.3■■□□□ 1.32
FOXRED2-203ENST00000397223 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
FOXRED2-203ENST00000397223 CDCA8Q53HL2 280 aa23.29■■□□□ 1.32
FOXRED2-203ENST00000397223 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
FOXRED2-203ENST00000397223 CDK19Q9BWU1 502 aa23.28■■□□□ 1.32
FOXRED2-203ENST00000397223 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
FOXRED2-203ENST00000397223 RBM19Q9Y4C8 960 aaKnown RBP23.28■■□□□ 1.32
FOXRED2-203ENST00000397223 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
FOXRED2-203ENST00000397223 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
FOXRED2-203ENST00000397223 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
FOXRED2-203ENST00000397223 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
FOXRED2-203ENST00000397223 CARD14Q9BXL6 1004 aa23.25■■□□□ 1.31
FOXRED2-203ENST00000397223 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
FOXRED2-203ENST00000397223 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
FOXRED2-203ENST00000397223 SLC24A1O60721 1099 aa23.22■■□□□ 1.31
FOXRED2-203ENST00000397223 SIRT1Q96EB6 747 aa23.22■■□□□ 1.31
FOXRED2-203ENST00000397223 STRCQ7RTU9 1775 aa23.21■■□□□ 1.31
FOXRED2-203ENST00000397223 WASLO00401 505 aaPredicted RBP23.2■■□□□ 1.3
FOXRED2-203ENST00000397223 PTCH1Q13635 1447 aa23.19■■□□□ 1.3
FOXRED2-203ENST00000397223 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
FOXRED2-203ENST00000397223 PRR36Q9H6K5 1346 aa23.17■■□□□ 1.3
FOXRED2-203ENST00000397223 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
FOXRED2-203ENST00000397223 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
FOXRED2-203ENST00000397223 STRCP1A6NGW2 1772 aa23.16■■□□□ 1.3
FOXRED2-203ENST00000397223 CD163L1Q9NR16 1453 aa23.15■■□□□ 1.3
FOXRED2-203ENST00000397223 KNSTRNQ9Y448 316 aa23.14■■□□□ 1.3
FOXRED2-203ENST00000397223 A0A1W2PP64 1363 aa23.13■■□□□ 1.29
FOXRED2-203ENST00000397223 NUDT16Q96DE0 195 aaKnown RBP23.13■■□□□ 1.29
FOXRED2-203ENST00000397223 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
FOXRED2-203ENST00000397223 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
FOXRED2-203ENST00000397223 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
FOXRED2-203ENST00000397223 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
FOXRED2-203ENST00000397223 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
FOXRED2-203ENST00000397223 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
FOXRED2-203ENST00000397223 ATP7BP35670 1465 aa23.11■■□□□ 1.29
FOXRED2-203ENST00000397223 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
FOXRED2-203ENST00000397223 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
FOXRED2-203ENST00000397223 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
FOXRED2-203ENST00000397223 PPIP5K1Q6PFW1 1433 aa23.09■■□□□ 1.29
FOXRED2-203ENST00000397223 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
FOXRED2-203ENST00000397223 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.28
FOXRED2-203ENST00000397223 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
FOXRED2-203ENST00000397223 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
FOXRED2-203ENST00000397223 CCDC61Q9Y6R9 512 aa23.04■■□□□ 1.28
FOXRED2-203ENST00000397223 NKTRP30414 1462 aaKnown RBP23.04■■□□□ 1.28
FOXRED2-203ENST00000397223 PROSER2Q86WR7 435 aaPredicted RBP23.03■■□□□ 1.28
FOXRED2-203ENST00000397223 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
FOXRED2-203ENST00000397223 RALBP1Q15311 655 aa23.02■■□□□ 1.28
FOXRED2-203ENST00000397223 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.28
FOXRED2-203ENST00000397223 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
FOXRED2-203ENST00000397223 ZNF335Q9H4Z2 1342 aaPredicted RBP23.01■■□□□ 1.27
FOXRED2-203ENST00000397223 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
FOXRED2-203ENST00000397223 TNNT2P45379 298 aaPredicted RBP23■■□□□ 1.27
FOXRED2-203ENST00000397223 C14orf37Q86TY3 774 aa23■■□□□ 1.27
FOXRED2-203ENST00000397223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
FOXRED2-203ENST00000397223 FMN2Q9NZ56 1722 aa23■■□□□ 1.27
FOXRED2-203ENST00000397223 TERF2IPQ9NYB0 399 aa23■■□□□ 1.27
FOXRED2-203ENST00000397223 GGNBP2Q9H3C7 697 aa22.99■■□□□ 1.27
FOXRED2-203ENST00000397223 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
FOXRED2-203ENST00000397223 ADGRL3Q9HAR2 1447 aa22.98■■□□□ 1.27
FOXRED2-203ENST00000397223 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
FOXRED2-203ENST00000397223 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
FOXRED2-203ENST00000397223 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
FOXRED2-203ENST00000397223 TMEM94Q12767 1356 aa22.97■■□□□ 1.27
FOXRED2-203ENST00000397223 ACEP12821 1306 aa22.97■■□□□ 1.27
FOXRED2-203ENST00000397223 MSH5O43196 834 aa22.97■■□□□ 1.27
FOXRED2-203ENST00000397223 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
FOXRED2-203ENST00000397223 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
FOXRED2-203ENST00000397223 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
FOXRED2-203ENST00000397223 FYB1O15117 783 aa22.96■■□□□ 1.27
FOXRED2-203ENST00000397223 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
FOXRED2-203ENST00000397223 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
FOXRED2-203ENST00000397223 ITSN1Q15811 1721 aa22.95■■□□□ 1.26
FOXRED2-203ENST00000397223 XIRP1Q702N8 1843 aaKnown RBP22.95■■□□□ 1.26
FOXRED2-203ENST00000397223 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
FOXRED2-203ENST00000397223 ERICH6BQ5W0A0 696 aa22.94■■□□□ 1.26
FOXRED2-203ENST00000397223 FBLN1P23142 703 aa22.94■■□□□ 1.26
FOXRED2-203ENST00000397223 ERICH6Q7L0X2 663 aa22.94■■□□□ 1.26
FOXRED2-203ENST00000397223 MON2Q7Z3U7 1717 aa22.93■■□□□ 1.26
FOXRED2-203ENST00000397223 PLEKHG3A1L390 1219 aa22.92■■□□□ 1.26
FOXRED2-203ENST00000397223 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms