RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.33
SCFD1-202ENST00000396629 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.96□□□□□ -0.33
SCFD1-202ENST00000396629 PXDNQ92626 1479 aa12.94□□□□□ -0.34
SCFD1-202ENST00000396629 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
SCFD1-202ENST00000396629 EP400Q96L91 3159 aa12.93□□□□□ -0.34
SCFD1-202ENST00000396629 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-202ENST00000396629 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
SCFD1-202ENST00000396629 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-202ENST00000396629 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
SCFD1-202ENST00000396629 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
SCFD1-202ENST00000396629 PPLO60437 1756 aa12.92□□□□□ -0.34
SCFD1-202ENST00000396629 GLI3P10071 1580 aa12.91□□□□□ -0.34
SCFD1-202ENST00000396629 ITGAEP38570 1179 aa12.9□□□□□ -0.34
SCFD1-202ENST00000396629 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
SCFD1-202ENST00000396629 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
SCFD1-202ENST00000396629 SLIT2O94813 1529 aa12.9□□□□□ -0.34
SCFD1-202ENST00000396629 RALGAPBQ86X10 1494 aa12.89□□□□□ -0.35
SCFD1-202ENST00000396629 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
SCFD1-202ENST00000396629 LRP5O75197 1615 aa12.89□□□□□ -0.35
SCFD1-202ENST00000396629 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
SCFD1-202ENST00000396629 FOXO3O43524 673 aa12.88□□□□□ -0.35
SCFD1-202ENST00000396629 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
SCFD1-202ENST00000396629 XPCQ01831 940 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-202ENST00000396629 NAIPQ13075 1403 aa12.86□□□□□ -0.35
SCFD1-202ENST00000396629 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
SCFD1-202ENST00000396629 DEFB132Q7Z7B7 95 aa12.85□□□□□ -0.35
SCFD1-202ENST00000396629 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
SCFD1-202ENST00000396629 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
SCFD1-202ENST00000396629 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
SCFD1-202ENST00000396629 KNDC1Q76NI1 1749 aa12.84□□□□□ -0.35
SCFD1-202ENST00000396629 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
SCFD1-202ENST00000396629 TECPR2O15040 1411 aa12.84□□□□□ -0.35
SCFD1-202ENST00000396629 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-202ENST00000396629 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
SCFD1-202ENST00000396629 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
SCFD1-202ENST00000396629 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
SCFD1-202ENST00000396629 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
SCFD1-202ENST00000396629 VPS72Q15906 364 aa12.81□□□□□ -0.36
SCFD1-202ENST00000396629 WAPLQ7Z5K2 1190 aa12.81□□□□□ -0.36
SCFD1-202ENST00000396629 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-202ENST00000396629 ABCA3Q99758 1704 aa12.81□□□□□ -0.36
SCFD1-202ENST00000396629 IFT172Q9UG01 1749 aa12.81□□□□□ -0.36
SCFD1-202ENST00000396629 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
SCFD1-202ENST00000396629 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
SCFD1-202ENST00000396629 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
SCFD1-202ENST00000396629 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
SCFD1-202ENST00000396629 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
SCFD1-202ENST00000396629 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
SCFD1-202ENST00000396629 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
SCFD1-202ENST00000396629 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
SCFD1-202ENST00000396629 STK26Q9P289 416 aa12.78□□□□□ -0.36
SCFD1-202ENST00000396629 NRAPQ86VF7 1730 aa12.77□□□□□ -0.37
SCFD1-202ENST00000396629 HRCP23327 699 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
SCFD1-202ENST00000396629 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 BAG6P46379 1132 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 PSME1Q06323 249 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
SCFD1-202ENST00000396629 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-202ENST00000396629 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-202ENST00000396629 CABLES1Q8TDN4 633 aa12.75□□□□□ -0.37
SCFD1-202ENST00000396629 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SCFD1-202ENST00000396629 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
SCFD1-202ENST00000396629 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
SCFD1-202ENST00000396629 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
SCFD1-202ENST00000396629 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
SCFD1-202ENST00000396629 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
SCFD1-202ENST00000396629 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
SCFD1-202ENST00000396629 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
SCFD1-202ENST00000396629 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
SCFD1-202ENST00000396629 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
SCFD1-202ENST00000396629 ARHGEF10O15013 1369 aa12.73□□□□□ -0.37
SCFD1-202ENST00000396629 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
SCFD1-202ENST00000396629 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
SCFD1-202ENST00000396629 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
SCFD1-202ENST00000396629 RGL3Q3MIN7 710 aa12.71□□□□□ -0.37
SCFD1-202ENST00000396629 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
SCFD1-202ENST00000396629 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-202ENST00000396629 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
SCFD1-202ENST00000396629 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
SCFD1-202ENST00000396629 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
SCFD1-202ENST00000396629 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
SCFD1-202ENST00000396629 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
SCFD1-202ENST00000396629 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
SCFD1-202ENST00000396629 A0A0G2JS52 829 aa12.68□□□□□ -0.38
SCFD1-202ENST00000396629 MYT1Q01538 1121 aa12.68□□□□□ -0.38
SCFD1-202ENST00000396629 C14orf93Q9H972 538 aaKnown RBP12.68□□□□□ -0.38
SCFD1-202ENST00000396629 BTG4Q9NY30 223 aa12.68□□□□□ -0.38
SCFD1-202ENST00000396629 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
SCFD1-202ENST00000396629 R3HDM1Q15032 1099 aaKnown RBP12.67□□□□□ -0.38
SCFD1-202ENST00000396629 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
SCFD1-202ENST00000396629 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
SCFD1-202ENST00000396629 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
SCFD1-202ENST00000396629 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
SCFD1-202ENST00000396629 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
SCFD1-202ENST00000396629 DLC1Q96QB1 1528 aa12.65□□□□□ -0.38
SCFD1-202ENST00000396629 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
SCFD1-202ENST00000396629 EZH2Q15910 746 aaKnown RBP12.64□□□□□ -0.39
SCFD1-202ENST00000396629 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms