RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 KDM4FA0A1W2PPD8 638 aa26.89■■□□□ 1.9
CCM2-202ENST00000381112 PTPRUQ92729 1446 aa26.89■■□□□ 1.9
CCM2-202ENST00000381112 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
CCM2-202ENST00000381112 CABP2Q9NPB3 220 aa26.86■■□□□ 1.89
CCM2-202ENST00000381112 KTN1Q86UP2 1357 aaKnown RBP26.85■■□□□ 1.89
CCM2-202ENST00000381112 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
CCM2-202ENST00000381112 SRPK2P78362 688 aaKnown RBP26.83■■□□□ 1.89
CCM2-202ENST00000381112 CNGB1Q14028 1251 aaPredicted RBP26.83■■□□□ 1.89
CCM2-202ENST00000381112 YTHDC1Q96MU7 727 aaKnown RBP26.83■■□□□ 1.89
CCM2-202ENST00000381112 AMOTL2Q9Y2J4 779 aa26.83■■□□□ 1.89
CCM2-202ENST00000381112 RALBP1Q15311 655 aa26.83■■□□□ 1.88
CCM2-202ENST00000381112 CDK19Q9BWU1 502 aa26.83■■□□□ 1.88
CCM2-202ENST00000381112 SLC12A5Q9H2X9 1139 aa26.83■■□□□ 1.88
CCM2-202ENST00000381112 KNSTRNQ9Y448 316 aa26.83■■□□□ 1.88
CCM2-202ENST00000381112 TMC1Q8TDI8 760 aa26.82■■□□□ 1.88
CCM2-202ENST00000381112 ATAD2Q6PL18 1390 aa26.81■■□□□ 1.88
CCM2-202ENST00000381112 PARD3Q8TEW0 1356 aa26.8■■□□□ 1.88
CCM2-202ENST00000381112 PTCH1Q13635 1447 aa26.8■■□□□ 1.88
CCM2-202ENST00000381112 CARD14Q9BXL6 1004 aa26.8■■□□□ 1.88
CCM2-202ENST00000381112 AMER1Q5JTC6 1135 aaPredicted RBP26.79■■□□□ 1.88
CCM2-202ENST00000381112 NINLQ9Y2I6 1382 aa26.79■■□□□ 1.88
CCM2-202ENST00000381112 NPHP4O75161 1426 aaPredicted RBP26.79■■□□□ 1.88
CCM2-202ENST00000381112 CCDC184Q52MB2 194 aa26.78■■□□□ 1.88
CCM2-202ENST00000381112 NPC1L1Q9UHC9 1359 aa26.77■■□□□ 1.88
CCM2-202ENST00000381112 WASLO00401 505 aaPredicted RBP26.76■■□□□ 1.88
CCM2-202ENST00000381112 XRN1Q8IZH2 1706 aaKnown RBP26.76■■□□□ 1.87
CCM2-202ENST00000381112 CC2D1BQ5T0F9 858 aaKnown RBP26.76■■□□□ 1.87
CCM2-202ENST00000381112 NCKAP5LQ9HCH0 1330 aa26.76■■□□□ 1.87
CCM2-202ENST00000381112 MYBBP1AQ9BQG0 1328 aaKnown RBP26.74■■□□□ 1.87
CCM2-202ENST00000381112 ANKRD36BQ8N2N9 1353 aa26.74■■□□□ 1.87
CCM2-202ENST00000381112 MRS2Q9HD23 443 aa26.72■■□□□ 1.87
CCM2-202ENST00000381112 KCNA6P17658 529 aa26.72■■□□□ 1.87
CCM2-202ENST00000381112 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
CCM2-202ENST00000381112 NSD3Q9BZ95 1437 aa26.7■■□□□ 1.87
CCM2-202ENST00000381112 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
CCM2-202ENST00000381112 CD163L1Q9NR16 1453 aa26.67■■□□□ 1.86
CCM2-202ENST00000381112 A0A1W2PP64 1363 aa26.67■■□□□ 1.86
CCM2-202ENST00000381112 CABP1Q9NZU7 370 aa26.66■■□□□ 1.86
CCM2-202ENST00000381112 BRD4O60885 1362 aaPredicted RBP26.66■■□□□ 1.86
CCM2-202ENST00000381112 TERF2IPQ9NYB0 399 aa26.66■■□□□ 1.86
CCM2-202ENST00000381112 NLRP13Q86W25 1043 aa26.65■■□□□ 1.86
CCM2-202ENST00000381112 NUDT16Q96DE0 195 aaKnown RBP26.64■■□□□ 1.86
CCM2-202ENST00000381112 CHD2O14647 1828 aaKnown RBP26.64■■□□□ 1.86
CCM2-202ENST00000381112 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.85
CCM2-202ENST00000381112 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
CCM2-202ENST00000381112 HSPA2P54652 639 aa26.62■■□□□ 1.85
CCM2-202ENST00000381112 USP32Q8NFA0 1604 aa26.62■■□□□ 1.85
CCM2-202ENST00000381112 ATP7BP35670 1465 aa26.62■■□□□ 1.85
CCM2-202ENST00000381112 CCDC61Q9Y6R9 512 aa26.62■■□□□ 1.85
CCM2-202ENST00000381112 CGNL1Q0VF96 1302 aa26.61■■□□□ 1.85
CCM2-202ENST00000381112 PRR36Q9H6K5 1346 aa26.61■■□□□ 1.85
CCM2-202ENST00000381112 HDGFL2Q7Z4V5 671 aaPredicted RBP26.6■■□□□ 1.85
CCM2-202ENST00000381112 PPIP5K1Q6PFW1 1433 aa26.6■■□□□ 1.85
CCM2-202ENST00000381112 PPP2R1AP30153 589 aa26.57■■□□□ 1.84
CCM2-202ENST00000381112 PNISRQ8TF01 805 aaKnown RBP26.56■■□□□ 1.84
CCM2-202ENST00000381112 NWD1Q149M9 1564 aa26.56■■□□□ 1.84
CCM2-202ENST00000381112 NSD2O96028 1365 aa26.56■■□□□ 1.84
CCM2-202ENST00000381112 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
CCM2-202ENST00000381112 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
CCM2-202ENST00000381112 CDC42BPGQ6DT37 1551 aa26.52■■□□□ 1.84
CCM2-202ENST00000381112 MORC1Q86VD1 984 aa26.51■■□□□ 1.83
CCM2-202ENST00000381112 PLEKHG3A1L390 1219 aa26.51■■□□□ 1.83
CCM2-202ENST00000381112 NUTM2FA1L443 756 aa26.5■■□□□ 1.83
CCM2-202ENST00000381112 TOPAZ1Q8N9V7 1692 aa26.5■■□□□ 1.83
CCM2-202ENST00000381112 FYB1O15117 783 aa26.48■■□□□ 1.83
CCM2-202ENST00000381112 RBM33Q96EV2 1170 aaKnown RBP26.48■■□□□ 1.83
CCM2-202ENST00000381112 ANKARQ7Z5J8 1434 aa26.48■■□□□ 1.83
CCM2-202ENST00000381112 ADGRL3Q9HAR2 1447 aa26.48■■□□□ 1.83
CCM2-202ENST00000381112 EDC4Q6P2E9 1401 aaKnown RBP26.47■■□□□ 1.83
CCM2-202ENST00000381112 NKTRP30414 1462 aaKnown RBP26.47■■□□□ 1.83
CCM2-202ENST00000381112 ZNF692Q9BU19 519 aaPredicted RBP26.47■■□□□ 1.83
CCM2-202ENST00000381112 NALCNQ8IZF0 1738 aa26.46■■□□□ 1.83
CCM2-202ENST00000381112 GGNBP2Q9H3C7 697 aa26.44■■□□□ 1.82
CCM2-202ENST00000381112 HNRNPUQ00839 825 aaKnown RBP eCLIP26.43■■□□□ 1.82
CCM2-202ENST00000381112 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
CCM2-202ENST00000381112 ACEP12821 1306 aa26.43■■□□□ 1.82
CCM2-202ENST00000381112 FMN2Q9NZ56 1722 aa26.43■■□□□ 1.82
CCM2-202ENST00000381112 PROSER2Q86WR7 435 aaPredicted RBP26.42■■□□□ 1.82
CCM2-202ENST00000381112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.41■■□□□ 1.82
CCM2-202ENST00000381112 MON2Q7Z3U7 1717 aa26.4■■□□□ 1.82
CCM2-202ENST00000381112 AKAP12Q02952 1782 aa26.4■■□□□ 1.82
CCM2-202ENST00000381112 TNNT2P45379 298 aaPredicted RBP26.4■■□□□ 1.82
CCM2-202ENST00000381112 POLR3AO14802 1390 aaPredicted RBP26.39■■□□□ 1.82
CCM2-202ENST00000381112 ITSN1Q15811 1721 aa26.38■■□□□ 1.81
CCM2-202ENST00000381112 C14orf37Q86TY3 774 aa26.38■■□□□ 1.81
CCM2-202ENST00000381112 USP6P35125 1406 aa26.37■■□□□ 1.81
CCM2-202ENST00000381112 PMFBP1Q8TBY8 1022 aa26.36■■□□□ 1.81
CCM2-202ENST00000381112 ANKRD26Q9UPS8 1709 aa26.36■■□□□ 1.81
CCM2-202ENST00000381112 KIF20BQ96Q89 1820 aa26.35■■□□□ 1.81
CCM2-202ENST00000381112 SSH2Q76I76 1423 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 INSRP06213 1382 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 NME9Q86XW9 330 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 STRCP1A6NGW2 1772 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 NCOA3Q9Y6Q9 1424 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
CCM2-202ENST00000381112 TMEM94Q12767 1356 aa26.33■■□□□ 1.81
CCM2-202ENST00000381112 NGDNQ8NEJ9 315 aaKnown RBP26.33■■□□□ 1.81
CCM2-202ENST00000381112 NRKQ7Z2Y5 1582 aa26.33■■□□□ 1.81
CCM2-202ENST00000381112 MTHFSP49914 203 aa26.32■■□□□ 1.8
CCM2-202ENST00000381112 C19orf44Q9H6X5 657 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms