RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
PCNA-202ENST00000379160 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
PCNA-202ENST00000379160 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
PCNA-202ENST00000379160 LRRC59Q96AG4 307 aaKnown RBP20.52■□□□□ 0.88
PCNA-202ENST00000379160 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
PCNA-202ENST00000379160 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
PCNA-202ENST00000379160 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
PCNA-202ENST00000379160 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
PCNA-202ENST00000379160 ADGRF5Q8IZF2 1346 aa20.47■□□□□ 0.87
PCNA-202ENST00000379160 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
PCNA-202ENST00000379160 PNPLA6Q8IY17 1366 aa20.46■□□□□ 0.87
PCNA-202ENST00000379160 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
PCNA-202ENST00000379160 AFF2P51816 1311 aa20.45■□□□□ 0.86
PCNA-202ENST00000379160 RXRBP28702 533 aa20.44■□□□□ 0.86
PCNA-202ENST00000379160 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
PCNA-202ENST00000379160 C8orf37Q96NL8 207 aa20.43■□□□□ 0.86
PCNA-202ENST00000379160 STK26Q9P289 416 aa20.43■□□□□ 0.86
PCNA-202ENST00000379160 CACNB1Q02641 598 aaPredicted RBP20.42■□□□□ 0.86
PCNA-202ENST00000379160 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
PCNA-202ENST00000379160 LAMC1P11047 1609 aa20.41■□□□□ 0.86
PCNA-202ENST00000379160 ANKRD30BQ9BXX2 1392 aa20.4■□□□□ 0.86
PCNA-202ENST00000379160 SOS2Q07890 1332 aaPredicted RBP20.4■□□□□ 0.86
PCNA-202ENST00000379160 ADAMTS2O95450 1211 aa20.39■□□□□ 0.85
PCNA-202ENST00000379160 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.85
PCNA-202ENST00000379160 WAPLQ7Z5K2 1190 aa20.39■□□□□ 0.85
PCNA-202ENST00000379160 ESCO1Q5FWF5 840 aa20.38■□□□□ 0.85
PCNA-202ENST00000379160 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
PCNA-202ENST00000379160 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
PCNA-202ENST00000379160 NGLY1Q96IV0 654 aa20.36■□□□□ 0.85
PCNA-202ENST00000379160 LRPPRCP42704 1394 aaKnown RBP20.36■□□□□ 0.85
PCNA-202ENST00000379160 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
PCNA-202ENST00000379160 NUTM2FA1L443 756 aa20.35■□□□□ 0.85
PCNA-202ENST00000379160 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
PCNA-202ENST00000379160 QTRT2Q9H974 415 aaKnown RBP20.35■□□□□ 0.85
PCNA-202ENST00000379160 TECPR2O15040 1411 aa20.35■□□□□ 0.85
PCNA-202ENST00000379160 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
PCNA-202ENST00000379160 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
PCNA-202ENST00000379160 CDK12Q9NYV4 1490 aaPredicted RBP20.34■□□□□ 0.85
PCNA-202ENST00000379160 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.84
PCNA-202ENST00000379160 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.84
PCNA-202ENST00000379160 FOXO3O43524 673 aa20.33■□□□□ 0.84
PCNA-202ENST00000379160 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.84
PCNA-202ENST00000379160 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
PCNA-202ENST00000379160 YTHDC2Q9H6S0 1430 aaKnown RBP20.31■□□□□ 0.84
PCNA-202ENST00000379160 RBM6P78332 1123 aaKnown RBP20.31■□□□□ 0.84
PCNA-202ENST00000379160 CAPN15O75808 1086 aa20.3■□□□□ 0.84
PCNA-202ENST00000379160 PXDNQ92626 1479 aa20.3■□□□□ 0.84
PCNA-202ENST00000379160 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
PCNA-202ENST00000379160 COL22A1Q8NFW1 1626 aaPredicted RBP20.29■□□□□ 0.84
PCNA-202ENST00000379160 USP21Q9UK80 565 aa20.29■□□□□ 0.84
PCNA-202ENST00000379160 RGS12O14924 1447 aa20.29■□□□□ 0.84
PCNA-202ENST00000379160 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
PCNA-202ENST00000379160 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
PCNA-202ENST00000379160 FMN2Q9NZ56 1722 aa20.27■□□□□ 0.83
PCNA-202ENST00000379160 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
PCNA-202ENST00000379160 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
PCNA-202ENST00000379160 MYOM2P54296 1465 aa20.25■□□□□ 0.83
PCNA-202ENST00000379160 FNBP4Q8N3X1 1017 aaPredicted RBP20.24■□□□□ 0.83
PCNA-202ENST00000379160 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
PCNA-202ENST00000379160 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
PCNA-202ENST00000379160 SIRT1Q96EB6 747 aa20.23■□□□□ 0.83
PCNA-202ENST00000379160 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
PCNA-202ENST00000379160 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
PCNA-202ENST00000379160 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
PCNA-202ENST00000379160 KIF1AQ12756 1690 aa20.21■□□□□ 0.83
PCNA-202ENST00000379160 PRAM1Q96QH2 718 aa20.21■□□□□ 0.83
PCNA-202ENST00000379160 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
PCNA-202ENST00000379160 ATRNO75882 1429 aa20.19■□□□□ 0.82
PCNA-202ENST00000379160 SPATA31A3Q5VYP0 1347 aa20.18■□□□□ 0.82
PCNA-202ENST00000379160 POGKQ9P215 609 aa20.18■□□□□ 0.82
PCNA-202ENST00000379160 PHF8Q9UPP1 1060 aa20.18■□□□□ 0.82
PCNA-202ENST00000379160 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
PCNA-202ENST00000379160 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
PCNA-202ENST00000379160 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
PCNA-202ENST00000379160 DCAF11Q8TEB1 546 aa20.15■□□□□ 0.82
PCNA-202ENST00000379160 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
PCNA-202ENST00000379160 TRAK1Q9UPV9 953 aa20.14■□□□□ 0.81
PCNA-202ENST00000379160 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
PCNA-202ENST00000379160 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
PCNA-202ENST00000379160 PSME1Q06323 249 aa20.13■□□□□ 0.81
PCNA-202ENST00000379160 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
PCNA-202ENST00000379160 EP400Q96L91 3159 aa20.13■□□□□ 0.81
PCNA-202ENST00000379160 HAP1P54257 671 aaPredicted RBP20.12■□□□□ 0.81
PCNA-202ENST00000379160 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
PCNA-202ENST00000379160 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
PCNA-202ENST00000379160 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
PCNA-202ENST00000379160 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
PCNA-202ENST00000379160 CABLES1Q8TDN4 633 aa20.11■□□□□ 0.81
PCNA-202ENST00000379160 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
PCNA-202ENST00000379160 USP32Q8NFA0 1604 aa20.1■□□□□ 0.81
PCNA-202ENST00000379160 MINK1Q8N4C8 1332 aaPredicted RBP20.09■□□□□ 0.81
PCNA-202ENST00000379160 UNC5CLQ8IV45 518 aa20.09■□□□□ 0.81
PCNA-202ENST00000379160 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.09■□□□□ 0.81
PCNA-202ENST00000379160 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
PCNA-202ENST00000379160 SLIT2O94813 1529 aa20.08■□□□□ 0.8
PCNA-202ENST00000379160 ANKARQ7Z5J8 1434 aa20.08■□□□□ 0.8
PCNA-202ENST00000379160 SBNO1A3KN83 1393 aa20.08■□□□□ 0.8
PCNA-202ENST00000379160 HRCP23327 699 aa20.07■□□□□ 0.8
PCNA-202ENST00000379160 ARHGEF10O15013 1369 aa20.05■□□□□ 0.8
PCNA-202ENST00000379160 GLI3P10071 1580 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms