RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 WDR43Q15061 677 aaKnown RBP eCLIP23.38■■□□□ 1.33
NKX2-2-201ENST00000377142 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
NKX2-2-201ENST00000377142 POGKQ9P215 609 aa23.38■■□□□ 1.33
NKX2-2-201ENST00000377142 NLRP1Q9C000 1473 aa23.38■■□□□ 1.33
NKX2-2-201ENST00000377142 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
NKX2-2-201ENST00000377142 SAFB2Q14151 953 aaKnown RBP eCLIP23.37■■□□□ 1.33
NKX2-2-201ENST00000377142 KNDC1Q76NI1 1749 aa23.37■■□□□ 1.33
NKX2-2-201ENST00000377142 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
NKX2-2-201ENST00000377142 NSD2O96028 1365 aa23.36■■□□□ 1.33
NKX2-2-201ENST00000377142 C3P01024 1663 aa23.36■■□□□ 1.33
NKX2-2-201ENST00000377142 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
NKX2-2-201ENST00000377142 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
NKX2-2-201ENST00000377142 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
NKX2-2-201ENST00000377142 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
NKX2-2-201ENST00000377142 TMEM2Q9UHN6 1383 aa23.33■■□□□ 1.33
NKX2-2-201ENST00000377142 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
NKX2-2-201ENST00000377142 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
NKX2-2-201ENST00000377142 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.32
NKX2-2-201ENST00000377142 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
NKX2-2-201ENST00000377142 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
NKX2-2-201ENST00000377142 IRX6P78412 446 aaPredicted RBP23.31■■□□□ 1.32
NKX2-2-201ENST00000377142 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
NKX2-2-201ENST00000377142 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
NKX2-2-201ENST00000377142 A0A1W2PP64 1363 aa23.29■■□□□ 1.32
NKX2-2-201ENST00000377142 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
NKX2-2-201ENST00000377142 TECPR2O15040 1411 aa23.28■■□□□ 1.32
NKX2-2-201ENST00000377142 CPS1P31327 1500 aa23.28■■□□□ 1.32
NKX2-2-201ENST00000377142 METP08581 1390 aa23.26■■□□□ 1.31
NKX2-2-201ENST00000377142 SALL2Q9Y467 1007 aaPredicted RBP23.26■■□□□ 1.31
NKX2-2-201ENST00000377142 SHPRHQ149N8 1683 aa23.26■■□□□ 1.31
NKX2-2-201ENST00000377142 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
NKX2-2-201ENST00000377142 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
NKX2-2-201ENST00000377142 CD163L1Q9NR16 1453 aa23.25■■□□□ 1.31
NKX2-2-201ENST00000377142 CDK19Q9BWU1 502 aa23.24■■□□□ 1.31
NKX2-2-201ENST00000377142 PLEKHH1Q9ULM0 1364 aa23.24■■□□□ 1.31
NKX2-2-201ENST00000377142 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
NKX2-2-201ENST00000377142 MED14O60244 1454 aa23.23■■□□□ 1.31
NKX2-2-201ENST00000377142 PLEKHG1Q9ULL1 1385 aa23.23■■□□□ 1.31
NKX2-2-201ENST00000377142 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
NKX2-2-201ENST00000377142 SLIT1O75093 1534 aa23.22■■□□□ 1.31
NKX2-2-201ENST00000377142 ATP7BP35670 1465 aa23.22■■□□□ 1.31
NKX2-2-201ENST00000377142 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
NKX2-2-201ENST00000377142 WAPLQ7Z5K2 1190 aa23.21■■□□□ 1.31
NKX2-2-201ENST00000377142 ADAMTS13Q76LX8 1427 aa23.21■■□□□ 1.31
NKX2-2-201ENST00000377142 CEBPAP49715 358 aaPredicted RBP23.2■■□□□ 1.3
NKX2-2-201ENST00000377142 HDGFL2Q7Z4V5 671 aaPredicted RBP23.2■■□□□ 1.3
NKX2-2-201ENST00000377142 ARHGAP23Q9P227 1491 aa23.2■■□□□ 1.3
NKX2-2-201ENST00000377142 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
NKX2-2-201ENST00000377142 NGEFQ8N5V2 710 aa23.17■■□□□ 1.3
NKX2-2-201ENST00000377142 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
NKX2-2-201ENST00000377142 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
NKX2-2-201ENST00000377142 RCAN3Q9UKA8 241 aa23.17■■□□□ 1.3
NKX2-2-201ENST00000377142 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
NKX2-2-201ENST00000377142 ADGRB2O60241 1585 aa23.15■■□□□ 1.3
NKX2-2-201ENST00000377142 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
NKX2-2-201ENST00000377142 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
NKX2-2-201ENST00000377142 MTHFSP49914 203 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 TXNDC2Q86VQ3 553 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 LTKP29376 864 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
NKX2-2-201ENST00000377142 RRP1P56182 461 aaKnown RBP23.12■■□□□ 1.29
NKX2-2-201ENST00000377142 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
NKX2-2-201ENST00000377142 FYB1O15117 783 aa23.1■■□□□ 1.29
NKX2-2-201ENST00000377142 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
NKX2-2-201ENST00000377142 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
NKX2-2-201ENST00000377142 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
NKX2-2-201ENST00000377142 APAF1O14727 1248 aa23.09■■□□□ 1.29
NKX2-2-201ENST00000377142 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
NKX2-2-201ENST00000377142 ROBO2Q9HCK4 1378 aa23.09■■□□□ 1.29
NKX2-2-201ENST00000377142 ITSN1Q15811 1721 aa23.09■■□□□ 1.29
NKX2-2-201ENST00000377142 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
NKX2-2-201ENST00000377142 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.29
NKX2-2-201ENST00000377142 THEMISQ8N1K5 641 aaPredicted RBP23.08■■□□□ 1.29
NKX2-2-201ENST00000377142 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.28
NKX2-2-201ENST00000377142 AKAP12Q02952 1782 aa23.07■■□□□ 1.28
NKX2-2-201ENST00000377142 IQSEC2Q5JU85 1478 aa23.07■■□□□ 1.28
NKX2-2-201ENST00000377142 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
NKX2-2-201ENST00000377142 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
NKX2-2-201ENST00000377142 DUSP27Q5VZP5 1158 aa23.05■■□□□ 1.28
NKX2-2-201ENST00000377142 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
NKX2-2-201ENST00000377142 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
NKX2-2-201ENST00000377142 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
NKX2-2-201ENST00000377142 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
NKX2-2-201ENST00000377142 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
NKX2-2-201ENST00000377142 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
NKX2-2-201ENST00000377142 PTPRUQ92729 1446 aa23.03■■□□□ 1.28
NKX2-2-201ENST00000377142 SLFN5Q08AF3 891 aa23.03■■□□□ 1.28
NKX2-2-201ENST00000377142 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
NKX2-2-201ENST00000377142 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
NKX2-2-201ENST00000377142 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
NKX2-2-201ENST00000377142 ZNF142P52746 1687 aaPredicted RBP23.02■■□□□ 1.28
NKX2-2-201ENST00000377142 B4GALNT3Q6L9W6 998 aa23.02■■□□□ 1.28
NKX2-2-201ENST00000377142 ADAMTSL3P82987 1691 aa23.02■■□□□ 1.28
NKX2-2-201ENST00000377142 TRMT2AQ8IZ69 625 aaKnown RBP23.01■■□□□ 1.27
NKX2-2-201ENST00000377142 XRN1Q8IZH2 1706 aaKnown RBP23■■□□□ 1.27
NKX2-2-201ENST00000377142 E9PSI1 815 aa22.99■■□□□ 1.27
NKX2-2-201ENST00000377142 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
NKX2-2-201ENST00000377142 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms