RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-201ENST00000376656 RTEL1-TNFRSF6BF6WH68 1400 aa20.96■□□□□ 0.95
TRIM39-201ENST00000376656 MFAP1P55081 439 aaKnown RBP20.95■□□□□ 0.94
TRIM39-201ENST00000376656 C22orf23Q9BZE7 217 aa20.95■□□□□ 0.94
TRIM39-201ENST00000376656 TRAK2O60296 914 aa20.95■□□□□ 0.94
TRIM39-201ENST00000376656 CHMP5Q9NZZ3 219 aa20.95■□□□□ 0.94
TRIM39-201ENST00000376656 MORC1Q86VD1 984 aa20.94■□□□□ 0.94
TRIM39-201ENST00000376656 WDR63Q8IWG1 891 aa20.94■□□□□ 0.94
TRIM39-201ENST00000376656 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
TRIM39-201ENST00000376656 NAP1L5Q96NT1 182 aaPredicted RBP20.93■□□□□ 0.94
TRIM39-201ENST00000376656 ADGRF5Q8IZF2 1346 aa20.93■□□□□ 0.94
TRIM39-201ENST00000376656 MVPQ14764 893 aaKnown RBP20.93■□□□□ 0.94
TRIM39-201ENST00000376656 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
TRIM39-201ENST00000376656 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
TRIM39-201ENST00000376656 NSD3Q9BZ95 1437 aa20.92■□□□□ 0.94
TRIM39-201ENST00000376656 CLCN1P35523 988 aa20.92■□□□□ 0.94
TRIM39-201ENST00000376656 PLCH2O75038 1416 aa20.91■□□□□ 0.94
TRIM39-201ENST00000376656 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
TRIM39-201ENST00000376656 ABCC1P33527 1531 aa20.91■□□□□ 0.94
TRIM39-201ENST00000376656 MAP3K4Q9Y6R4 1608 aa20.9■□□□□ 0.94
TRIM39-201ENST00000376656 SPAG9O60271 1321 aaKnown RBP20.89■□□□□ 0.93
TRIM39-201ENST00000376656 UGGT1Q9NYU2 1555 aa20.88■□□□□ 0.93
TRIM39-201ENST00000376656 MRE11P49959 708 aa20.88■□□□□ 0.93
TRIM39-201ENST00000376656 FTSJ3Q8IY81 847 aaKnown RBP20.88■□□□□ 0.93
TRIM39-201ENST00000376656 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
TRIM39-201ENST00000376656 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
TRIM39-201ENST00000376656 TET3O43151 1660 aa20.87■□□□□ 0.93
TRIM39-201ENST00000376656 ZKSCAN2Q63HK3 967 aa20.87■□□□□ 0.93
TRIM39-201ENST00000376656 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
TRIM39-201ENST00000376656 ZNF692Q9BU19 519 aaPredicted RBP20.87■□□□□ 0.93
TRIM39-201ENST00000376656 MTHFSP49914 203 aa20.87■□□□□ 0.93
TRIM39-201ENST00000376656 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
TRIM39-201ENST00000376656 CCDC27Q2M243 656 aa20.86■□□□□ 0.93
TRIM39-201ENST00000376656 MYH16Q9H6N6 1097 aa20.86■□□□□ 0.93
TRIM39-201ENST00000376656 KANK1Q14678 1352 aa20.85■□□□□ 0.93
TRIM39-201ENST00000376656 HSCBQ8IWL3 235 aa20.85■□□□□ 0.93
TRIM39-201ENST00000376656 GRPEL1Q9HAV7 217 aa20.85■□□□□ 0.93
TRIM39-201ENST00000376656 MYOM2P54296 1465 aa20.85■□□□□ 0.93
TRIM39-201ENST00000376656 DEPDC5O75140 1603 aa20.84■□□□□ 0.93
TRIM39-201ENST00000376656 ZNF518AQ6AHZ1 1483 aa20.83■□□□□ 0.93
TRIM39-201ENST00000376656 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.93
TRIM39-201ENST00000376656 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.92
TRIM39-201ENST00000376656 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.92
TRIM39-201ENST00000376656 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
TRIM39-201ENST00000376656 DDX11L8A8MPP1 907 aa20.82■□□□□ 0.92
TRIM39-201ENST00000376656 HDAC1Q13547 482 aaPredicted RBP20.81■□□□□ 0.92
TRIM39-201ENST00000376656 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
TRIM39-201ENST00000376656 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 TRIM27P14373 513 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 DDIT3P35638 169 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 CFAP53Q96M91 514 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
TRIM39-201ENST00000376656 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM39-201ENST00000376656 ITPRIPQ8IWB1 547 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
TRIM39-201ENST00000376656 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
TRIM39-201ENST00000376656 NEURL4Q96JN8 1562 aa20.79■□□□□ 0.92
TRIM39-201ENST00000376656 KIF3BO15066 747 aa20.78■□□□□ 0.92
TRIM39-201ENST00000376656 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
TRIM39-201ENST00000376656 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
TRIM39-201ENST00000376656 VWDEQ8N2E2 1590 aa20.78■□□□□ 0.92
TRIM39-201ENST00000376656 ESPNB1AK53 854 aa20.78■□□□□ 0.92
TRIM39-201ENST00000376656 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
TRIM39-201ENST00000376656 SMC5Q8IY18 1101 aa20.77■□□□□ 0.92
TRIM39-201ENST00000376656 SSH1Q8WYL5 1049 aa20.77■□□□□ 0.92
TRIM39-201ENST00000376656 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.92
TRIM39-201ENST00000376656 KIF1BO60333 1816 aa20.77■□□□□ 0.92
TRIM39-201ENST00000376656 MROH2AA6NES4 1674 aa20.76■□□□□ 0.91
TRIM39-201ENST00000376656 GAS2L3Q86XJ1 694 aa20.76■□□□□ 0.91
TRIM39-201ENST00000376656 DDX19BQ9UMR2 479 aa20.76■□□□□ 0.91
TRIM39-201ENST00000376656 HSP90AA2PQ14568 343 aaPredicted RBP20.75■□□□□ 0.91
TRIM39-201ENST00000376656 RBM25P49756 843 aaKnown RBP20.75■□□□□ 0.91
TRIM39-201ENST00000376656 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
TRIM39-201ENST00000376656 NRXN1Q9ULB1 1477 aa20.74■□□□□ 0.91
TRIM39-201ENST00000376656 GLIPR1L2Q4G1C9 344 aa20.74■□□□□ 0.91
TRIM39-201ENST00000376656 ISY1Q9ULR0 285 aaKnown RBP20.74■□□□□ 0.91
TRIM39-201ENST00000376656 ADGRB2O60241 1585 aa20.74■□□□□ 0.91
TRIM39-201ENST00000376656 SNX21Q969T3 373 aa20.73■□□□□ 0.91
TRIM39-201ENST00000376656 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
TRIM39-201ENST00000376656 NOS1P29475 1434 aa20.73■□□□□ 0.91
TRIM39-201ENST00000376656 CT47B1P0C2W7 299 aaPredicted RBP20.73■□□□□ 0.91
TRIM39-201ENST00000376656 ZCCHC11Q5TAX3 1644 aaKnown RBP20.73■□□□□ 0.91
TRIM39-201ENST00000376656 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
TRIM39-201ENST00000376656 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
TRIM39-201ENST00000376656 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
TRIM39-201ENST00000376656 ZC3H13Q5T200 1668 aaKnown RBP20.72■□□□□ 0.91
TRIM39-201ENST00000376656 CHD1O14646 1710 aa20.72■□□□□ 0.91
TRIM39-201ENST00000376656 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
TRIM39-201ENST00000376656 RRP9O43818 475 aaKnown RBP20.71■□□□□ 0.91
TRIM39-201ENST00000376656 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
TRIM39-201ENST00000376656 LNPKQ9C0E8 428 aa20.71■□□□□ 0.91
TRIM39-201ENST00000376656 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
TRIM39-201ENST00000376656 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
TRIM39-201ENST00000376656 TMEM132EQ6IEE7 984 aa20.7■□□□□ 0.9
TRIM39-201ENST00000376656 TRIM44Q96DX7 344 aaPredicted RBP20.7■□□□□ 0.9
TRIM39-201ENST00000376656 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
TRIM39-201ENST00000376656 RAB3GAP1Q15042 981 aa20.7■□□□□ 0.9
TRIM39-201ENST00000376656 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms