RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
A1CF-204ENST00000373997 PARD3Q8TEW0 1356 aa17.82■□□□□ 0.44
A1CF-204ENST00000373997 RALBP1Q15311 655 aa17.82■□□□□ 0.44
A1CF-204ENST00000373997 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
A1CF-204ENST00000373997 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
A1CF-204ENST00000373997 LTKP29376 864 aa17.81■□□□□ 0.44
A1CF-204ENST00000373997 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
A1CF-204ENST00000373997 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
A1CF-204ENST00000373997 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
A1CF-204ENST00000373997 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
A1CF-204ENST00000373997 TXNDC2Q86VQ3 553 aa17.8■□□□□ 0.44
A1CF-204ENST00000373997 PLEKHG1Q9ULL1 1385 aa17.8■□□□□ 0.44
A1CF-204ENST00000373997 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
A1CF-204ENST00000373997 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
A1CF-204ENST00000373997 EID1Q9Y6B2 187 aa17.78■□□□□ 0.44
A1CF-204ENST00000373997 CPS1P31327 1500 aa17.78■□□□□ 0.44
A1CF-204ENST00000373997 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
A1CF-204ENST00000373997 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.44
A1CF-204ENST00000373997 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
A1CF-204ENST00000373997 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.43
A1CF-204ENST00000373997 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.43
A1CF-204ENST00000373997 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
A1CF-204ENST00000373997 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
A1CF-204ENST00000373997 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
A1CF-204ENST00000373997 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
A1CF-204ENST00000373997 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
A1CF-204ENST00000373997 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 MSH5O43196 834 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 SLC26A8Q96RN1 970 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
A1CF-204ENST00000373997 MED14O60244 1454 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 TECPR2O15040 1411 aa17.73■□□□□ 0.43
A1CF-204ENST00000373997 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
A1CF-204ENST00000373997 NLRP13Q86W25 1043 aa17.72■□□□□ 0.43
A1CF-204ENST00000373997 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
A1CF-204ENST00000373997 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
A1CF-204ENST00000373997 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
A1CF-204ENST00000373997 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
A1CF-204ENST00000373997 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
A1CF-204ENST00000373997 FAM135BQ49AJ0 1406 aa17.69■□□□□ 0.42
A1CF-204ENST00000373997 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
A1CF-204ENST00000373997 NPC1L1Q9UHC9 1359 aa17.69■□□□□ 0.42
A1CF-204ENST00000373997 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
A1CF-204ENST00000373997 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
A1CF-204ENST00000373997 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
A1CF-204ENST00000373997 ROBO2Q9HCK4 1378 aa17.68■□□□□ 0.42
A1CF-204ENST00000373997 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
A1CF-204ENST00000373997 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
A1CF-204ENST00000373997 NINLQ9Y2I6 1382 aa17.66■□□□□ 0.42
A1CF-204ENST00000373997 XRN1Q8IZH2 1706 aaKnown RBP17.66■□□□□ 0.42
A1CF-204ENST00000373997 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
A1CF-204ENST00000373997 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
A1CF-204ENST00000373997 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
A1CF-204ENST00000373997 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
A1CF-204ENST00000373997 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
A1CF-204ENST00000373997 ITSN1Q15811 1721 aa17.65■□□□□ 0.42
A1CF-204ENST00000373997 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
A1CF-204ENST00000373997 TBX22Q9Y458 520 aa17.64■□□□□ 0.41
A1CF-204ENST00000373997 SIRT1Q96EB6 747 aa17.63■□□□□ 0.41
A1CF-204ENST00000373997 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
A1CF-204ENST00000373997 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
A1CF-204ENST00000373997 WASLO00401 505 aaPredicted RBP17.62■□□□□ 0.41
A1CF-204ENST00000373997 AMOTL2Q9Y2J4 779 aa17.62■□□□□ 0.41
A1CF-204ENST00000373997 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
A1CF-204ENST00000373997 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
A1CF-204ENST00000373997 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
A1CF-204ENST00000373997 CABP1Q9NZU7 370 aa17.6■□□□□ 0.41
A1CF-204ENST00000373997 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
A1CF-204ENST00000373997 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
A1CF-204ENST00000373997 TERF2IPQ9NYB0 399 aa17.6■□□□□ 0.41
A1CF-204ENST00000373997 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
A1CF-204ENST00000373997 TOPAZ1Q8N9V7 1692 aa17.59■□□□□ 0.41
A1CF-204ENST00000373997 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
A1CF-204ENST00000373997 ATP7BP35670 1465 aa17.59■□□□□ 0.41
A1CF-204ENST00000373997 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
A1CF-204ENST00000373997 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
A1CF-204ENST00000373997 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
A1CF-204ENST00000373997 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
A1CF-204ENST00000373997 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
A1CF-204ENST00000373997 NSD2O96028 1365 aa17.56■□□□□ 0.4
A1CF-204ENST00000373997 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
A1CF-204ENST00000373997 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
A1CF-204ENST00000373997 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
A1CF-204ENST00000373997 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
A1CF-204ENST00000373997 NALCNQ8IZF0 1738 aa17.54■□□□□ 0.4
A1CF-204ENST00000373997 KCNA6P17658 529 aa17.54■□□□□ 0.4
A1CF-204ENST00000373997 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
A1CF-204ENST00000373997 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
A1CF-204ENST00000373997 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
A1CF-204ENST00000373997 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
A1CF-204ENST00000373997 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
A1CF-204ENST00000373997 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
A1CF-204ENST00000373997 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
A1CF-204ENST00000373997 FMN2Q9NZ56 1722 aa17.51■□□□□ 0.39
A1CF-204ENST00000373997 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
A1CF-204ENST00000373997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
A1CF-204ENST00000373997 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
A1CF-204ENST00000373997 NKTRP30414 1462 aaKnown RBP17.49■□□□□ 0.39
A1CF-204ENST00000373997 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms