RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
VPS26A-202ENST00000373382 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
VPS26A-202ENST00000373382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
VPS26A-202ENST00000373382 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
VPS26A-202ENST00000373382 SYNMO15061 1565 aa22.45■■□□□ 1.18
VPS26A-202ENST00000373382 HSP90AA1P07900 732 aaKnown RBP22.45■■□□□ 1.18
VPS26A-202ENST00000373382 ABCC2Q92887 1545 aa22.45■■□□□ 1.18
VPS26A-202ENST00000373382 NPC1L1Q9UHC9 1359 aa22.45■■□□□ 1.18
VPS26A-202ENST00000373382 IQGAP3Q86VI3 1631 aa22.45■■□□□ 1.18
VPS26A-202ENST00000373382 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
VPS26A-202ENST00000373382 EXOSC9Q06265 439 aaKnown RBP22.44■■□□□ 1.18
VPS26A-202ENST00000373382 NINLQ9Y2I6 1382 aa22.43■■□□□ 1.18
VPS26A-202ENST00000373382 LNPKQ9C0E8 428 aa22.42■■□□□ 1.18
VPS26A-202ENST00000373382 ATP10AO60312 1499 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 KANK1Q14678 1352 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 MADDQ8WXG6 1647 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
VPS26A-202ENST00000373382 POLR3AO14802 1390 aaPredicted RBP22.4■■□□□ 1.18
VPS26A-202ENST00000373382 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
VPS26A-202ENST00000373382 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
VPS26A-202ENST00000373382 TRIM27P14373 513 aa22.38■■□□□ 1.17
VPS26A-202ENST00000373382 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
VPS26A-202ENST00000373382 SLC24A1O60721 1099 aa22.37■■□□□ 1.17
VPS26A-202ENST00000373382 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
VPS26A-202ENST00000373382 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
VPS26A-202ENST00000373382 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
VPS26A-202ENST00000373382 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
VPS26A-202ENST00000373382 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
VPS26A-202ENST00000373382 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
VPS26A-202ENST00000373382 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
VPS26A-202ENST00000373382 TRIM44Q96DX7 344 aaPredicted RBP22.34■■□□□ 1.17
VPS26A-202ENST00000373382 GGNBP2Q9H3C7 697 aa22.34■■□□□ 1.17
VPS26A-202ENST00000373382 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
VPS26A-202ENST00000373382 GGT6Q6P531 493 aa22.33■■□□□ 1.17
VPS26A-202ENST00000373382 STK26Q9P289 416 aa22.33■■□□□ 1.17
VPS26A-202ENST00000373382 GRPEL1Q9HAV7 217 aa22.33■■□□□ 1.17
VPS26A-202ENST00000373382 PLCH2O75038 1416 aa22.32■■□□□ 1.16
VPS26A-202ENST00000373382 KDM5AP29375 1690 aaKnown RBP22.32■■□□□ 1.16
VPS26A-202ENST00000373382 AAMPQ13685 434 aa22.32■■□□□ 1.16
VPS26A-202ENST00000373382 FSD2A1L4K1 749 aa22.31■■□□□ 1.16
VPS26A-202ENST00000373382 MRE11P49959 708 aa22.31■■□□□ 1.16
VPS26A-202ENST00000373382 C1orf115Q9H7X2 142 aa22.31■■□□□ 1.16
VPS26A-202ENST00000373382 DDX19BQ9UMR2 479 aa22.31■■□□□ 1.16
VPS26A-202ENST00000373382 ATF7IPQ6VMQ6 1270 aa22.31■■□□□ 1.16
VPS26A-202ENST00000373382 CLTCL1P53675 1640 aa22.3■■□□□ 1.16
VPS26A-202ENST00000373382 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
VPS26A-202ENST00000373382 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
VPS26A-202ENST00000373382 MYOM1P52179 1685 aa22.29■■□□□ 1.16
VPS26A-202ENST00000373382 ANKRD45Q5TZF3 282 aa22.29■■□□□ 1.16
VPS26A-202ENST00000373382 DDX11L8A8MPP1 907 aa22.29■■□□□ 1.16
VPS26A-202ENST00000373382 TNPO1Q92973 898 aaKnown RBP22.28■■□□□ 1.16
VPS26A-202ENST00000373382 NOS1P29475 1434 aa22.28■■□□□ 1.16
VPS26A-202ENST00000373382 RIPK4P57078 832 aa22.28■■□□□ 1.16
VPS26A-202ENST00000373382 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
VPS26A-202ENST00000373382 PTPRTO14522 1441 aa22.27■■□□□ 1.16
VPS26A-202ENST00000373382 TRPM2O94759 1503 aa22.27■■□□□ 1.15
VPS26A-202ENST00000373382 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
VPS26A-202ENST00000373382 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
VPS26A-202ENST00000373382 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
VPS26A-202ENST00000373382 CLCN1P35523 988 aa22.25■■□□□ 1.15
VPS26A-202ENST00000373382 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
VPS26A-202ENST00000373382 ESPNB1AK53 854 aa22.24■■□□□ 1.15
VPS26A-202ENST00000373382 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
VPS26A-202ENST00000373382 GAS2L3Q86XJ1 694 aa22.24■■□□□ 1.15
VPS26A-202ENST00000373382 VSIG10Q8N0Z9 540 aa22.23■■□□□ 1.15
VPS26A-202ENST00000373382 CCDC27Q2M243 656 aa22.23■■□□□ 1.15
VPS26A-202ENST00000373382 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
VPS26A-202ENST00000373382 HDAC1Q13547 482 aaPredicted RBP22.22■■□□□ 1.15
VPS26A-202ENST00000373382 GBP4Q96PP9 640 aa22.22■■□□□ 1.15
VPS26A-202ENST00000373382 FBLN1P23142 703 aa22.22■■□□□ 1.15
VPS26A-202ENST00000373382 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
VPS26A-202ENST00000373382 CD2BP2O95400 341 aaKnown RBP22.2■■□□□ 1.14
VPS26A-202ENST00000373382 CHD1LQ86WJ1 897 aa22.2■■□□□ 1.14
VPS26A-202ENST00000373382 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.14
VPS26A-202ENST00000373382 SPHKAPQ2M3C7 1700 aa22.2■■□□□ 1.14
VPS26A-202ENST00000373382 CEP152O94986 1710 aa22.2■■□□□ 1.14
VPS26A-202ENST00000373382 SMC5Q8IY18 1101 aa22.2■■□□□ 1.14
VPS26A-202ENST00000373382 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
VPS26A-202ENST00000373382 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
VPS26A-202ENST00000373382 GLIPR1L2Q4G1C9 344 aa22.19■■□□□ 1.14
VPS26A-202ENST00000373382 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
VPS26A-202ENST00000373382 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
VPS26A-202ENST00000373382 EVC2Q86UK5 1308 aa22.19■■□□□ 1.14
VPS26A-202ENST00000373382 ZNF692Q9BU19 519 aaPredicted RBP22.18■■□□□ 1.14
VPS26A-202ENST00000373382 SSFA2P28290 1259 aa22.17■■□□□ 1.14
VPS26A-202ENST00000373382 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
VPS26A-202ENST00000373382 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
VPS26A-202ENST00000373382 APBB1O00213 710 aa22.16■■□□□ 1.14
VPS26A-202ENST00000373382 NUCB1Q02818 461 aa22.16■■□□□ 1.14
VPS26A-202ENST00000373382 ZNF518AQ6AHZ1 1483 aa22.16■■□□□ 1.14
VPS26A-202ENST00000373382 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
VPS26A-202ENST00000373382 RTEL1-TNFRSF6BF6WH68 1400 aa22.15■■□□□ 1.14
VPS26A-202ENST00000373382 DDX49Q9Y6V7 483 aaKnown RBP22.15■■□□□ 1.14
VPS26A-202ENST00000373382 ABCC1P33527 1531 aa22.14■■□□□ 1.14
VPS26A-202ENST00000373382 HMOX1P09601 288 aa22.14■■□□□ 1.13
VPS26A-202ENST00000373382 ABCA6Q8N139 1617 aa22.14■■□□□ 1.13
VPS26A-202ENST00000373382 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.13
VPS26A-202ENST00000373382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms