RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 SSH1Q8WYL5 1049 aa24.29■■□□□ 1.48
LRP8-204ENST00000371454 TRIM27P14373 513 aa24.28■■□□□ 1.48
LRP8-204ENST00000371454 SHANK2Q9UPX8 1470 aa24.28■■□□□ 1.48
LRP8-204ENST00000371454 UBE2Q2Q8WVN8 375 aa24.28■■□□□ 1.48
LRP8-204ENST00000371454 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
LRP8-204ENST00000371454 INSRP06213 1382 aa24.27■■□□□ 1.48
LRP8-204ENST00000371454 ABCA8O94911 1581 aa24.27■■□□□ 1.48
LRP8-204ENST00000371454 NCLP19338 710 aaKnown RBP24.27■■□□□ 1.48
LRP8-204ENST00000371454 FOXD4L5Q5VV16 416 aaPredicted RBP24.27■■□□□ 1.48
LRP8-204ENST00000371454 VSIG10Q8N0Z9 540 aa24.27■■□□□ 1.48
LRP8-204ENST00000371454 TMEM57Q8N5G2 664 aa24.27■■□□□ 1.48
LRP8-204ENST00000371454 FOXD4L4Q8WXT5 416 aaPredicted RBP24.27■■□□□ 1.48
LRP8-204ENST00000371454 MVPQ14764 893 aaKnown RBP24.26■■□□□ 1.47
LRP8-204ENST00000371454 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
LRP8-204ENST00000371454 HSCBQ8IWL3 235 aa24.26■■□□□ 1.47
LRP8-204ENST00000371454 HSP90AB1P08238 724 aaKnown RBP24.25■■□□□ 1.47
LRP8-204ENST00000371454 CHAMP1Q96JM3 812 aa24.25■■□□□ 1.47
LRP8-204ENST00000371454 CD2BP2O95400 341 aaKnown RBP24.25■■□□□ 1.47
LRP8-204ENST00000371454 L1TD1Q5T7N2 865 aaKnown RBP24.25■■□□□ 1.47
LRP8-204ENST00000371454 CFAP65Q6ZU64 1925 aaKnown RBP24.25■■□□□ 1.47
LRP8-204ENST00000371454 CYB5RLQ6IPT4 315 aa24.24■■□□□ 1.47
LRP8-204ENST00000371454 GAS2L3Q86XJ1 694 aa24.23■■□□□ 1.47
LRP8-204ENST00000371454 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
LRP8-204ENST00000371454 ANKRD45Q5TZF3 282 aa24.22■■□□□ 1.47
LRP8-204ENST00000371454 ERBB4Q15303 1308 aa24.22■■□□□ 1.47
LRP8-204ENST00000371454 MYO5CQ9NQX4 1742 aa24.21■■□□□ 1.47
LRP8-204ENST00000371454 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
LRP8-204ENST00000371454 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
LRP8-204ENST00000371454 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
LRP8-204ENST00000371454 MYH16Q9H6N6 1097 aa24.2■■□□□ 1.46
LRP8-204ENST00000371454 HMOX1P09601 288 aa24.19■■□□□ 1.46
LRP8-204ENST00000371454 CFAP53Q96M91 514 aa24.19■■□□□ 1.46
LRP8-204ENST00000371454 CHMP5Q9NZZ3 219 aa24.19■■□□□ 1.46
LRP8-204ENST00000371454 PIK3C2GO75747 1445 aa24.19■■□□□ 1.46
LRP8-204ENST00000371454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
LRP8-204ENST00000371454 NLRP1Q9C000 1473 aa24.18■■□□□ 1.46
LRP8-204ENST00000371454 RIPK4P57078 832 aa24.17■■□□□ 1.46
LRP8-204ENST00000371454 FOXD4L6Q3SYB3 417 aaPredicted RBP24.17■■□□□ 1.46
LRP8-204ENST00000371454 FOXD4L3Q6VB84 417 aaPredicted RBP24.17■■□□□ 1.46
LRP8-204ENST00000371454 TNPO1Q92973 898 aaKnown RBP24.17■■□□□ 1.46
LRP8-204ENST00000371454 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
LRP8-204ENST00000371454 MPNDQ8N594 471 aa24.16■■□□□ 1.46
LRP8-204ENST00000371454 GRPEL1Q9HAV7 217 aa24.16■■□□□ 1.46
LRP8-204ENST00000371454 SCAPERQ9BY12 1400 aa24.16■■□□□ 1.46
LRP8-204ENST00000371454 TRIM44Q96DX7 344 aaPredicted RBP24.15■■□□□ 1.46
LRP8-204ENST00000371454 MINK1Q8N4C8 1332 aaPredicted RBP24.15■■□□□ 1.46
LRP8-204ENST00000371454 ERVK-7P63135 1459 aa24.12■■□□□ 1.45
LRP8-204ENST00000371454 SSFA2P28290 1259 aa24.12■■□□□ 1.45
LRP8-204ENST00000371454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.11■■□□□ 1.453e-6■■■■■ 36
LRP8-204ENST00000371454 NOL8Q76FK4 1167 aaKnown RBP24.1■■□□□ 1.45
LRP8-204ENST00000371454 ATF7IPQ6VMQ6 1270 aa24.1■■□□□ 1.45
LRP8-204ENST00000371454 HSP90AA2PQ14568 343 aaPredicted RBP24.09■■□□□ 1.45
LRP8-204ENST00000371454 ATP10AO60312 1499 aa24.09■■□□□ 1.45
LRP8-204ENST00000371454 TMPOP42166 694 aaKnown RBP24.09■■□□□ 1.45
LRP8-204ENST00000371454 RBM10P98175 930 aaKnown RBP24.09■■□□□ 1.45
LRP8-204ENST00000371454 NOS1P29475 1434 aa24.08■■□□□ 1.45
LRP8-204ENST00000371454 DTNBO60941 627 aa24.07■■□□□ 1.44
LRP8-204ENST00000371454 SOX12O15370 315 aa24.07■■□□□ 1.44
LRP8-204ENST00000371454 TSPYL6Q8N831 410 aa24.07■■□□□ 1.44
LRP8-204ENST00000371454 ESPNB1AK53 854 aa24.06■■□□□ 1.44
LRP8-204ENST00000371454 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
LRP8-204ENST00000371454 C16orf71Q8IYS4 520 aaPredicted RBP24.06■■□□□ 1.44
LRP8-204ENST00000371454 TRIM35Q9UPQ4 493 aa24.06■■□□□ 1.44
LRP8-204ENST00000371454 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
LRP8-204ENST00000371454 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
LRP8-204ENST00000371454 FSD2A1L4K1 749 aa24.05■■□□□ 1.44
LRP8-204ENST00000371454 PKP1Q13835 747 aa24.05■■□□□ 1.44
LRP8-204ENST00000371454 WDR63Q8IWG1 891 aa24.05■■□□□ 1.44
LRP8-204ENST00000371454 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
LRP8-204ENST00000371454 DDX19BQ9UMR2 479 aa24.03■■□□□ 1.44
LRP8-204ENST00000371454 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
LRP8-204ENST00000371454 SYNMO15061 1565 aa24.02■■□□□ 1.44
LRP8-204ENST00000371454 MRE11P49959 708 aa24.02■■□□□ 1.44
LRP8-204ENST00000371454 DDX49Q9Y6V7 483 aaKnown RBP24.02■■□□□ 1.44
LRP8-204ENST00000371454 KANK1Q14678 1352 aa24.02■■□□□ 1.43
LRP8-204ENST00000371454 POLR3AO14802 1390 aaPredicted RBP24.01■■□□□ 1.43
LRP8-204ENST00000371454 MCTP1Q6DN14 999 aa24.01■■□□□ 1.43
LRP8-204ENST00000371454 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
LRP8-204ENST00000371454 EIF2AK4Q9P2K8 1649 aaKnown RBP24.01■■□□□ 1.43
LRP8-204ENST00000371454 FAM83GA6ND36 823 aa24■■□□□ 1.43
LRP8-204ENST00000371454 MADDQ8WXG6 1647 aa24■■□□□ 1.43
LRP8-204ENST00000371454 MAST1Q9Y2H9 1570 aa24■■□□□ 1.43
LRP8-204ENST00000371454 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
LRP8-204ENST00000371454 KRT24Q2M2I5 525 aa23.99■■□□□ 1.43
LRP8-204ENST00000371454 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
LRP8-204ENST00000371454 PRKAR2BP31323 418 aa23.99■■□□□ 1.43
LRP8-204ENST00000371454 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 SMARCA5O60264 1052 aaPredicted RBP23.98■■□□□ 1.43
LRP8-204ENST00000371454 TBC1D9Q6ZT07 1266 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 RBM27Q9P2N5 1060 aaKnown RBP23.98■■□□□ 1.43
LRP8-204ENST00000371454 PTPRTO14522 1441 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 ZMYND15Q9H091 742 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 DUOX2Q9NRD8 1548 aa23.98■■□□□ 1.43
LRP8-204ENST00000371454 ABCC2Q92887 1545 aa23.97■■□□□ 1.43
LRP8-204ENST00000371454 CAVIN1Q6NZI2 390 aaKnown RBP23.97■■□□□ 1.43
LRP8-204ENST00000371454 CLTCL1P53675 1640 aa23.97■■□□□ 1.43
LRP8-204ENST00000371454 ZBTB40Q9NUA8 1239 aa23.97■■□□□ 1.43
LRP8-204ENST00000371454 CLCN1P35523 988 aa23.96■■□□□ 1.43
LRP8-204ENST00000371454 TSHZ3Q63HK5 1081 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms