RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KIAA1210Q9ULL0 1709 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 TMF1P82094 1093 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 SLIT1O75093 1534 aa19.43■□□□□ 0.7
PRKN-204ENST00000366896 ARHGAP23Q9P227 1491 aa19.43■□□□□ 0.7
PRKN-204ENST00000366896 THEMISQ8N1K5 641 aaPredicted RBP19.43■□□□□ 0.7
PRKN-204ENST00000366896 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRKN-204ENST00000366896 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
PRKN-204ENST00000366896 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
PRKN-204ENST00000366896 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.69
PRKN-204ENST00000366896 C14orf93Q9H972 538 aaKnown RBP19.38■□□□□ 0.69
PRKN-204ENST00000366896 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
PRKN-204ENST00000366896 LTKP29376 864 aa19.37■□□□□ 0.69
PRKN-204ENST00000366896 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
PRKN-204ENST00000366896 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
PRKN-204ENST00000366896 PDE4AP27815 886 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
PRKN-204ENST00000366896 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 PLIN1O60240 522 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 MS4A1P11836 297 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 ADGRB1O14514 1584 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
PRKN-204ENST00000366896 CDCA8Q53HL2 280 aa19.33■□□□□ 0.69
PRKN-204ENST00000366896 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.69
PRKN-204ENST00000366896 BACH2Q9BYV9 841 aa19.33■□□□□ 0.68
PRKN-204ENST00000366896 PLEKHG1Q9ULL1 1385 aa19.33■□□□□ 0.68
PRKN-204ENST00000366896 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
PRKN-204ENST00000366896 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
PRKN-204ENST00000366896 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
PRKN-204ENST00000366896 NEFMP07197 916 aa19.31■□□□□ 0.68
PRKN-204ENST00000366896 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
PRKN-204ENST00000366896 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
PRKN-204ENST00000366896 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
PRKN-204ENST00000366896 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
PRKN-204ENST00000366896 MED14O60244 1454 aa19.26■□□□□ 0.67
PRKN-204ENST00000366896 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
PRKN-204ENST00000366896 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
PRKN-204ENST00000366896 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
PRKN-204ENST00000366896 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
PRKN-204ENST00000366896 SKAP1Q86WV1 359 aa19.24■□□□□ 0.67
PRKN-204ENST00000366896 MYOM1P52179 1685 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 METP08581 1390 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 YTHDC2Q9H6S0 1430 aaKnown RBP19.23■□□□□ 0.67
PRKN-204ENST00000366896 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 C20orf194Q5TEA3 1177 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 HSPA2P54652 639 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
PRKN-204ENST00000366896 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.673e-8■■■■■ 70.1
PRKN-204ENST00000366896 TRAK1Q9UPV9 953 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
PRKN-204ENST00000366896 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
PRKN-204ENST00000366896 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
PRKN-204ENST00000366896 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
PRKN-204ENST00000366896 STK26Q9P289 416 aa19.19■□□□□ 0.66
PRKN-204ENST00000366896 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
PRKN-204ENST00000366896 KNDC1Q76NI1 1749 aa19.17■□□□□ 0.66
PRKN-204ENST00000366896 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
PRKN-204ENST00000366896 ABCC11Q96J66 1382 aa19.16■□□□□ 0.66
PRKN-204ENST00000366896 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
PRKN-204ENST00000366896 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
PRKN-204ENST00000366896 TECPR2O15040 1411 aa19.15■□□□□ 0.66
PRKN-204ENST00000366896 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.66
PRKN-204ENST00000366896 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 STRCQ7RTU9 1775 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 CCDC146Q8IYE0 955 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
PRKN-204ENST00000366896 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
PRKN-204ENST00000366896 CPS1P31327 1500 aa19.13■□□□□ 0.65
PRKN-204ENST00000366896 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
PRKN-204ENST00000366896 GSE1Q14687 1217 aa19.12■□□□□ 0.65
PRKN-204ENST00000366896 XRN1Q8IZH2 1706 aaKnown RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 SLFN5Q08AF3 891 aa19.11■□□□□ 0.65
PRKN-204ENST00000366896 CENPQQ7L2Z9 268 aaPredicted RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
PRKN-204ENST00000366896 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 SIRT1Q96EB6 747 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 NFKBIBQ15653 356 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.65
PRKN-204ENST00000366896 POGKQ9P215 609 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms