RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
PRPF39-201ENST00000355765 PDCL3Q9H2J4 239 aa23.76■■□□□ 1.39
PRPF39-201ENST00000355765 RBM10P98175 930 aaKnown RBP23.76■■□□□ 1.39
PRPF39-201ENST00000355765 AAMPQ13685 434 aa23.76■■□□□ 1.39
PRPF39-201ENST00000355765 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
PRPF39-201ENST00000355765 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
PRPF39-201ENST00000355765 SAMD9LQ8IVG5 1584 aa23.75■■□□□ 1.39
PRPF39-201ENST00000355765 DDIT3P35638 169 aa23.74■■□□□ 1.39
PRPF39-201ENST00000355765 IQGAP1P46940 1657 aa23.74■■□□□ 1.39
PRPF39-201ENST00000355765 SCAF11Q99590 1463 aaKnown RBP23.73■■□□□ 1.39
PRPF39-201ENST00000355765 GBP4Q96PP9 640 aa23.73■■□□□ 1.39
PRPF39-201ENST00000355765 UNC13BO14795 1591 aa23.73■■□□□ 1.39
PRPF39-201ENST00000355765 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
PRPF39-201ENST00000355765 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.39
PRPF39-201ENST00000355765 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
PRPF39-201ENST00000355765 DZIP1LQ8IYY4 767 aaKnown RBP23.7■■□□□ 1.38
PRPF39-201ENST00000355765 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
PRPF39-201ENST00000355765 NASPP49321 788 aaPredicted RBP23.69■■□□□ 1.38
PRPF39-201ENST00000355765 RAB3GAP1Q15042 981 aa23.69■■□□□ 1.38
PRPF39-201ENST00000355765 ZKSCAN2Q63HK3 967 aa23.69■■□□□ 1.38
PRPF39-201ENST00000355765 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
PRPF39-201ENST00000355765 CCDC173Q0VFZ6 552 aa23.67■■□□□ 1.38
PRPF39-201ENST00000355765 ITPRIPQ8IWB1 547 aa23.67■■□□□ 1.38
PRPF39-201ENST00000355765 SMC5Q8IY18 1101 aa23.67■■□□□ 1.38
PRPF39-201ENST00000355765 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
PRPF39-201ENST00000355765 ZSCAN30Q86W11 494 aa23.67■■□□□ 1.38
PRPF39-201ENST00000355765 CD2BP2O95400 341 aaKnown RBP23.66■■□□□ 1.38
PRPF39-201ENST00000355765 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
PRPF39-201ENST00000355765 SKOR2Q2VWA4 1001 aaPredicted RBP23.66■■□□□ 1.38
PRPF39-201ENST00000355765 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
PRPF39-201ENST00000355765 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 RIPK4P57078 832 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 TSR2Q969E8 191 aaKnown RBP23.65■■□□□ 1.38
PRPF39-201ENST00000355765 MSNP26038 577 aaKnown RBP23.65■■□□□ 1.38
PRPF39-201ENST00000355765 SSFA2P28290 1259 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 ARID3AQ99856 593 aa23.65■■□□□ 1.38
PRPF39-201ENST00000355765 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.38
PRPF39-201ENST00000355765 SNX21Q969T3 373 aa23.64■■□□□ 1.38
PRPF39-201ENST00000355765 FAM13BQ9NYF5 915 aa23.64■■□□□ 1.38
PRPF39-201ENST00000355765 ZCCHC11Q5TAX3 1644 aaKnown RBP23.64■■□□□ 1.37
PRPF39-201ENST00000355765 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
PRPF39-201ENST00000355765 SMC4Q9NTJ3 1288 aa23.64■■□□□ 1.37
PRPF39-201ENST00000355765 OFD1O75665 1012 aa23.63■■□□□ 1.37
PRPF39-201ENST00000355765 RBM25P49756 843 aaKnown RBP23.63■■□□□ 1.37
PRPF39-201ENST00000355765 LNPKQ9C0E8 428 aa23.63■■□□□ 1.37
PRPF39-201ENST00000355765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.63■■□□□ 1.37
PRPF39-201ENST00000355765 CIZ1Q9ULV3 898 aaPredicted RBP23.63■■□□□ 1.37
PRPF39-201ENST00000355765 R3HCC1Q9Y3T6 440 aaKnown RBP23.63■■□□□ 1.37
PRPF39-201ENST00000355765 ATP10AO60312 1499 aa23.63■■□□□ 1.37
PRPF39-201ENST00000355765 PPP1R9BQ96SB3 815 aa23.62■■□□□ 1.37
PRPF39-201ENST00000355765 ANP32BQ92688 251 aaKnown RBP23.62■■□□□ 1.37
PRPF39-201ENST00000355765 TRIM27P14373 513 aa23.62■■□□□ 1.37
PRPF39-201ENST00000355765 RBM42Q9BTD8 480 aaKnown RBP23.62■■□□□ 1.37
PRPF39-201ENST00000355765 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
PRPF39-201ENST00000355765 CEP152O94986 1710 aa23.61■■□□□ 1.37
PRPF39-201ENST00000355765 DDX49Q9Y6V7 483 aaKnown RBP23.61■■□□□ 1.37
PRPF39-201ENST00000355765 SCAPERQ9BY12 1400 aa23.61■■□□□ 1.37
PRPF39-201ENST00000355765 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
PRPF39-201ENST00000355765 HDAC1Q13547 482 aaPredicted RBP23.6■■□□□ 1.37
PRPF39-201ENST00000355765 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
PRPF39-201ENST00000355765 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
PRPF39-201ENST00000355765 IQSEC2Q5JU85 1478 aa23.59■■□□□ 1.37
PRPF39-201ENST00000355765 PREX2Q70Z35 1606 aa23.58■■□□□ 1.37
PRPF39-201ENST00000355765 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.58■■□□□ 1.37
PRPF39-201ENST00000355765 KIF2CQ99661 725 aa23.58■■□□□ 1.37
PRPF39-201ENST00000355765 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
PRPF39-201ENST00000355765 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
PRPF39-201ENST00000355765 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
PRPF39-201ENST00000355765 NCLP19338 710 aaKnown RBP23.57■■□□□ 1.36
PRPF39-201ENST00000355765 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
PRPF39-201ENST00000355765 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
PRPF39-201ENST00000355765 MTHFSP49914 203 aa23.56■■□□□ 1.36
PRPF39-201ENST00000355765 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
PRPF39-201ENST00000355765 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
PRPF39-201ENST00000355765 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
PRPF39-201ENST00000355765 NSD3Q9BZ95 1437 aa23.55■■□□□ 1.36
PRPF39-201ENST00000355765 TMEM57Q8N5G2 664 aa23.55■■□□□ 1.36
PRPF39-201ENST00000355765 GOLGA6L22H0YM25 854 aa23.54■■□□□ 1.36
PRPF39-201ENST00000355765 XPCQ01831 940 aaPredicted RBP23.54■■□□□ 1.36
PRPF39-201ENST00000355765 PRDM4Q9UKN5 801 aa23.54■■□□□ 1.36
PRPF39-201ENST00000355765 K7ELQ4 463 aaPredicted RBP23.54■■□□□ 1.36
PRPF39-201ENST00000355765 PTMSP20962 102 aa23.54■■□□□ 1.36
PRPF39-201ENST00000355765 NOB1Q9ULX3 412 aaKnown RBP23.54■■□□□ 1.36
PRPF39-201ENST00000355765 U2AF1L5P0DN76 240 aaPredicted RBP23.53■■□□□ 1.36
PRPF39-201ENST00000355765 U2AF1Q01081 240 aaKnown RBP eCLIP23.53■■□□□ 1.366e-6■■■□□ 14.7
PRPF39-201ENST00000355765 BAG4O95429 457 aaKnown RBP23.52■■□□□ 1.36
PRPF39-201ENST00000355765 KLHL40Q2TBA0 621 aa23.52■■□□□ 1.36
PRPF39-201ENST00000355765 ATF7IPQ6VMQ6 1270 aa23.52■■□□□ 1.36
PRPF39-201ENST00000355765 SLC12A5Q9H2X9 1139 aa23.52■■□□□ 1.36
PRPF39-201ENST00000355765 SPHKAPQ2M3C7 1700 aa23.52■■□□□ 1.35
PRPF39-201ENST00000355765 CAVIN1Q6NZI2 390 aaKnown RBP23.51■■□□□ 1.35
PRPF39-201ENST00000355765 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
PRPF39-201ENST00000355765 NUCB1Q02818 461 aa23.51■■□□□ 1.35
PRPF39-201ENST00000355765 CCDC27Q2M243 656 aa23.5■■□□□ 1.35
PRPF39-201ENST00000355765 MCTP1Q6DN14 999 aa23.5■■□□□ 1.35
PRPF39-201ENST00000355765 DUOX2Q9NRD8 1548 aa23.5■■□□□ 1.35
PRPF39-201ENST00000355765 UQCRHLA0A096LP55 91 aa23.5■■□□□ 1.35
PRPF39-201ENST00000355765 UQCRHP07919 91 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms