RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.84
C2CD4A-201ENST00000355522 GGNBP2Q9H3C7 697 aa20.33■□□□□ 0.84
C2CD4A-201ENST00000355522 NASPP49321 788 aaPredicted RBP20.33■□□□□ 0.84
C2CD4A-201ENST00000355522 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.84
C2CD4A-201ENST00000355522 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
C2CD4A-201ENST00000355522 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
C2CD4A-201ENST00000355522 TNPO1Q92973 898 aaKnown RBP20.32■□□□□ 0.84
C2CD4A-201ENST00000355522 GAS2L3Q86XJ1 694 aa20.31■□□□□ 0.84
C2CD4A-201ENST00000355522 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
C2CD4A-201ENST00000355522 SRPK2P78362 688 aaKnown RBP20.3■□□□□ 0.84
C2CD4A-201ENST00000355522 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
C2CD4A-201ENST00000355522 TPM2P07951 284 aa20.3■□□□□ 0.84
C2CD4A-201ENST00000355522 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
C2CD4A-201ENST00000355522 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
C2CD4A-201ENST00000355522 SAMD9LQ8IVG5 1584 aa20.28■□□□□ 0.84
C2CD4A-201ENST00000355522 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
C2CD4A-201ENST00000355522 ZNF521Q96K83 1311 aa20.28■□□□□ 0.84
C2CD4A-201ENST00000355522 SOX12O15370 315 aa20.28■□□□□ 0.84
C2CD4A-201ENST00000355522 FOXD4L5Q5VV16 416 aaPredicted RBP20.27■□□□□ 0.84
C2CD4A-201ENST00000355522 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.84
C2CD4A-201ENST00000355522 ADGBQ8N7X0 1667 aa20.27■□□□□ 0.84
C2CD4A-201ENST00000355522 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.84
C2CD4A-201ENST00000355522 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.83
C2CD4A-201ENST00000355522 ARHGEF12Q9NZN5 1544 aa20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 PTMAP06454 111 aaKnown RBP20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 PDCL3Q9H2J4 239 aa20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
C2CD4A-201ENST00000355522 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
C2CD4A-201ENST00000355522 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
C2CD4A-201ENST00000355522 UGGT1Q9NYU2 1555 aa20.25■□□□□ 0.83
C2CD4A-201ENST00000355522 NUP160Q12769 1436 aa20.24■□□□□ 0.83
C2CD4A-201ENST00000355522 NUTM2FA1L443 756 aa20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 MLECQ14165 292 aa20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 CAVIN1Q6NZI2 390 aaKnown RBP20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 MPNDQ8N594 471 aa20.23■□□□□ 0.83
C2CD4A-201ENST00000355522 APBB1O00213 710 aa20.22■□□□□ 0.83
C2CD4A-201ENST00000355522 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
C2CD4A-201ENST00000355522 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
C2CD4A-201ENST00000355522 SSFA2P28290 1259 aa20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 SKOR2Q2VWA4 1001 aaPredicted RBP20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 TTC37Q6PGP7 1564 aa20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 ZSCAN30Q86W11 494 aa20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 C1orf115Q9H7X2 142 aa20.21■□□□□ 0.83
C2CD4A-201ENST00000355522 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 ABCA8O94911 1581 aa20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
C2CD4A-201ENST00000355522 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 HMOX1P09601 288 aa20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
C2CD4A-201ENST00000355522 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
C2CD4A-201ENST00000355522 KANK1Q14678 1352 aa20.17■□□□□ 0.82
C2CD4A-201ENST00000355522 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
C2CD4A-201ENST00000355522 UQCRHLA0A096LP55 91 aa20.16■□□□□ 0.82
C2CD4A-201ENST00000355522 UQCRHP07919 91 aa20.16■□□□□ 0.82
C2CD4A-201ENST00000355522 FOXD4L6Q3SYB3 417 aaPredicted RBP20.16■□□□□ 0.82
C2CD4A-201ENST00000355522 FOXD4L3Q6VB84 417 aaPredicted RBP20.16■□□□□ 0.82
C2CD4A-201ENST00000355522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.15■□□□□ 0.82
C2CD4A-201ENST00000355522 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
C2CD4A-201ENST00000355522 CROCC2H7BZ55 1655 aa20.14■□□□□ 0.81
C2CD4A-201ENST00000355522 PLCB2Q00722 1185 aa20.14■□□□□ 0.81
C2CD4A-201ENST00000355522 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
C2CD4A-201ENST00000355522 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 SHANK2Q9UPX8 1470 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
C2CD4A-201ENST00000355522 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
C2CD4A-201ENST00000355522 DDX19BQ9UMR2 479 aa20.11■□□□□ 0.81
C2CD4A-201ENST00000355522 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
C2CD4A-201ENST00000355522 NOS1P29475 1434 aa20.1■□□□□ 0.81
C2CD4A-201ENST00000355522 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
C2CD4A-201ENST00000355522 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 K7ELQ4 463 aaPredicted RBP20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 INSRP06213 1382 aa20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 TRIM27P14373 513 aa20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 PTMSP20962 102 aa20.09■□□□□ 0.81
C2CD4A-201ENST00000355522 SCAF11Q99590 1463 aaKnown RBP20.08■□□□□ 0.8
C2CD4A-201ENST00000355522 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.8
C2CD4A-201ENST00000355522 RIPK4P57078 832 aa20.08■□□□□ 0.8
C2CD4A-201ENST00000355522 RBM27Q9P2N5 1060 aaKnown RBP20.08■□□□□ 0.8
C2CD4A-201ENST00000355522 OFD1O75665 1012 aa20.07■□□□□ 0.8
C2CD4A-201ENST00000355522 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
C2CD4A-201ENST00000355522 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
C2CD4A-201ENST00000355522 RAB3GAP1Q15042 981 aa20.07■□□□□ 0.8
C2CD4A-201ENST00000355522 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms