RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 BCL9LQ86UU0 1499 aa24.11■■□□□ 1.45
COPE-202ENST00000349893 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
COPE-202ENST00000349893 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
COPE-202ENST00000349893 PXDNQ92626 1479 aa24.07■■□□□ 1.44
COPE-202ENST00000349893 VGFO15240 615 aaPredicted RBP24.07■■□□□ 1.44
COPE-202ENST00000349893 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
COPE-202ENST00000349893 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.05■■□□□ 1.44
COPE-202ENST00000349893 NPHP3Q7Z494 1330 aa24.05■■□□□ 1.44
COPE-202ENST00000349893 ITGAEP38570 1179 aa24.02■■□□□ 1.44
COPE-202ENST00000349893 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
COPE-202ENST00000349893 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
COPE-202ENST00000349893 PPLO60437 1756 aa24.01■■□□□ 1.43
COPE-202ENST00000349893 SLIT2O94813 1529 aa23.97■■□□□ 1.43
COPE-202ENST00000349893 GLI3P10071 1580 aa23.97■■□□□ 1.43
COPE-202ENST00000349893 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
COPE-202ENST00000349893 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
COPE-202ENST00000349893 TECPR2O15040 1411 aa23.95■■□□□ 1.42
COPE-202ENST00000349893 NAIPQ13075 1403 aa23.95■■□□□ 1.42
COPE-202ENST00000349893 LRPPRCP42704 1394 aaKnown RBP23.95■■□□□ 1.42
COPE-202ENST00000349893 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
COPE-202ENST00000349893 FOXO3O43524 673 aa23.93■■□□□ 1.42
COPE-202ENST00000349893 UNC5CLQ8IV45 518 aa23.92■■□□□ 1.42
COPE-202ENST00000349893 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.42
COPE-202ENST00000349893 LRP5O75197 1615 aa23.89■■□□□ 1.42
COPE-202ENST00000349893 USP32Q8NFA0 1604 aa23.89■■□□□ 1.42
COPE-202ENST00000349893 XPCQ01831 940 aaPredicted RBP23.89■■□□□ 1.41
COPE-202ENST00000349893 SPATA31A3Q5VYP0 1347 aa23.88■■□□□ 1.41
COPE-202ENST00000349893 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
COPE-202ENST00000349893 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
COPE-202ENST00000349893 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
COPE-202ENST00000349893 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
COPE-202ENST00000349893 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
COPE-202ENST00000349893 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
COPE-202ENST00000349893 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
COPE-202ENST00000349893 NWD2Q9ULI1 1742 aa23.82■■□□□ 1.4
COPE-202ENST00000349893 WAPLQ7Z5K2 1190 aa23.82■■□□□ 1.4
COPE-202ENST00000349893 DEFB132Q7Z7B7 95 aa23.82■■□□□ 1.4
COPE-202ENST00000349893 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
COPE-202ENST00000349893 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
COPE-202ENST00000349893 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
COPE-202ENST00000349893 VPS72Q15906 364 aa23.8■■□□□ 1.4
COPE-202ENST00000349893 SEPT12Q8IYM1 358 aa23.8■■□□□ 1.4
COPE-202ENST00000349893 PLCH1Q4KWH8 1693 aa23.79■■□□□ 1.4
COPE-202ENST00000349893 SPATA31E1Q6ZUB1 1445 aa23.79■■□□□ 1.4
COPE-202ENST00000349893 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
COPE-202ENST00000349893 TNS3Q68CZ2 1445 aa23.78■■□□□ 1.4
COPE-202ENST00000349893 NUTM2FA1L443 756 aa23.78■■□□□ 1.4
COPE-202ENST00000349893 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
COPE-202ENST00000349893 ABCA3Q99758 1704 aa23.77■■□□□ 1.4
COPE-202ENST00000349893 KRT28Q7Z3Y7 464 aa23.77■■□□□ 1.4
COPE-202ENST00000349893 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
COPE-202ENST00000349893 SF3B2Q13435 895 aaKnown RBP23.76■■□□□ 1.39
COPE-202ENST00000349893 STK26Q9P289 416 aa23.76■■□□□ 1.39
COPE-202ENST00000349893 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
COPE-202ENST00000349893 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
COPE-202ENST00000349893 SBNO1A3KN83 1393 aa23.74■■□□□ 1.39
COPE-202ENST00000349893 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
COPE-202ENST00000349893 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
COPE-202ENST00000349893 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
COPE-202ENST00000349893 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
COPE-202ENST00000349893 TMEM132EQ6IEE7 984 aa23.71■■□□□ 1.39
COPE-202ENST00000349893 PSME1Q06323 249 aa23.7■■□□□ 1.38
COPE-202ENST00000349893 PHF8Q9UPP1 1060 aa23.7■■□□□ 1.38
COPE-202ENST00000349893 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
COPE-202ENST00000349893 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
COPE-202ENST00000349893 NRAPQ86VF7 1730 aa23.69■■□□□ 1.38
COPE-202ENST00000349893 HRCP23327 699 aa23.67■■□□□ 1.38
COPE-202ENST00000349893 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
COPE-202ENST00000349893 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
COPE-202ENST00000349893 FAM83GA6ND36 823 aa23.65■■□□□ 1.38
COPE-202ENST00000349893 BAG6P46379 1132 aa23.65■■□□□ 1.38
COPE-202ENST00000349893 RGPD1P0DJD0 1748 aa23.63■■□□□ 1.37
COPE-202ENST00000349893 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
COPE-202ENST00000349893 DISP2A7MBM2 1401 aa23.62■■□□□ 1.37
COPE-202ENST00000349893 ANKARQ7Z5J8 1434 aa23.62■■□□□ 1.37
COPE-202ENST00000349893 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
COPE-202ENST00000349893 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
COPE-202ENST00000349893 PSDA5PKW4 1024 aaPredicted RBP23.61■■□□□ 1.37
COPE-202ENST00000349893 ADGRB2O60241 1585 aa23.6■■□□□ 1.37
COPE-202ENST00000349893 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
COPE-202ENST00000349893 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
COPE-202ENST00000349893 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
COPE-202ENST00000349893 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
COPE-202ENST00000349893 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
COPE-202ENST00000349893 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
COPE-202ENST00000349893 TNS1Q9HBL0 1735 aaKnown RBP23.57■■□□□ 1.36
COPE-202ENST00000349893 BTG4Q9NY30 223 aa23.56■■□□□ 1.36
COPE-202ENST00000349893 LMOD2Q6P5Q4 547 aa23.55■■□□□ 1.36
COPE-202ENST00000349893 CRYBG1Q9Y4K1 1723 aa23.55■■□□□ 1.36
COPE-202ENST00000349893 EN1Q05925 392 aaPredicted RBP23.54■■□□□ 1.36
COPE-202ENST00000349893 PRAM1Q96QH2 718 aa23.54■■□□□ 1.36
COPE-202ENST00000349893 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
COPE-202ENST00000349893 SPATA31A5Q5VU36 1347 aa23.54■■□□□ 1.36
COPE-202ENST00000349893 SPATA31A7Q8IWB4 1347 aa23.54■■□□□ 1.36
COPE-202ENST00000349893 A0A0G2JS52 829 aa23.53■■□□□ 1.36
COPE-202ENST00000349893 MYT1Q01538 1121 aa23.53■■□□□ 1.36
COPE-202ENST00000349893 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
COPE-202ENST00000349893 CFAP70Q5T0N1 1121 aa23.52■■□□□ 1.36
COPE-202ENST00000349893 PMFBP1Q8TBY8 1022 aa23.51■■□□□ 1.35
COPE-202ENST00000349893 R3HDM1Q15032 1099 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms