RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CABP2Q9NPB3 220 aa28.25■■■□□ 2.11
PTPN18-202ENST00000347849 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
PTPN18-202ENST00000347849 BLMP54132 1417 aaPredicted RBP28.22■■■□□ 2.11
PTPN18-202ENST00000347849 NSD3Q9BZ95 1437 aa28.22■■■□□ 2.11
PTPN18-202ENST00000347849 PRAM1Q96QH2 718 aa28.21■■■□□ 2.11
PTPN18-202ENST00000347849 EVC2Q86UK5 1308 aa28.21■■■□□ 2.11
PTPN18-202ENST00000347849 ALKQ9UM73 1620 aa28.21■■■□□ 2.11
PTPN18-202ENST00000347849 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
PTPN18-202ENST00000347849 PTPRMP28827 1452 aa28.2■■■□□ 2.11
PTPN18-202ENST00000347849 ANP32AP39687 249 aaKnown RBP28.19■■■□□ 2.1
PTPN18-202ENST00000347849 RIMS2Q9UQ26 1411 aa28.19■■■□□ 2.1
PTPN18-202ENST00000347849 CDCA7LQ96GN5 454 aa28.18■■■□□ 2.1
PTPN18-202ENST00000347849 MINK1Q8N4C8 1332 aaPredicted RBP28.18■■■□□ 2.1
PTPN18-202ENST00000347849 IPO9Q96P70 1041 aaKnown RBP28.17■■■□□ 2.1
PTPN18-202ENST00000347849 TNNT2P45379 298 aaPredicted RBP28.14■■■□□ 2.1
PTPN18-202ENST00000347849 POGKQ9P215 609 aa28.14■■■□□ 2.09
PTPN18-202ENST00000347849 WDR43Q15061 677 aaKnown RBP eCLIP28.13■■■□□ 2.09
PTPN18-202ENST00000347849 SRPK2P78362 688 aaKnown RBP28.12■■■□□ 2.09
PTPN18-202ENST00000347849 ZBTB47Q9UFB7 747 aaPredicted RBP28.12■■■□□ 2.09
PTPN18-202ENST00000347849 INSRP06213 1382 aa28.12■■■□□ 2.09
PTPN18-202ENST00000347849 CEBPAP49715 358 aaPredicted RBP28.11■■■□□ 2.09
PTPN18-202ENST00000347849 WAPLQ7Z5K2 1190 aa28.1■■■□□ 2.09
PTPN18-202ENST00000347849 PUS7Q96PZ0 661 aaKnown RBP28.1■■■□□ 2.09
PTPN18-202ENST00000347849 TNRQ92752 1358 aa28.09■■■□□ 2.09
PTPN18-202ENST00000347849 MORC1Q86VD1 984 aa28.08■■■□□ 2.09
PTPN18-202ENST00000347849 CCDC146Q8IYE0 955 aa28.07■■■□□ 2.08
PTPN18-202ENST00000347849 ANKRD36BQ8N2N9 1353 aa28.07■■■□□ 2.08
PTPN18-202ENST00000347849 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
PTPN18-202ENST00000347849 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
PTPN18-202ENST00000347849 METP08581 1390 aa28.04■■■□□ 2.08
PTPN18-202ENST00000347849 A0A1W2PP64 1363 aa28.04■■■□□ 2.08
PTPN18-202ENST00000347849 PLPPR3Q6T4P5 718 aa28.03■■■□□ 2.08
PTPN18-202ENST00000347849 SETD1AO15047 1707 aaKnown RBP28.03■■■□□ 2.08
PTPN18-202ENST00000347849 PDE3BQ13370 1112 aa28.03■■■□□ 2.08
PTPN18-202ENST00000347849 CDK19Q9BWU1 502 aa28.03■■■□□ 2.08
PTPN18-202ENST00000347849 CGNL1Q0VF96 1302 aa28.03■■■□□ 2.08
PTPN18-202ENST00000347849 NRXN3Q9Y4C0 1643 aa28.03■■■□□ 2.08
PTPN18-202ENST00000347849 EXOC6Q8TAG9 804 aa28.02■■■□□ 2.08
PTPN18-202ENST00000347849 RRP1P56182 461 aaKnown RBP28.01■■■□□ 2.08
PTPN18-202ENST00000347849 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.98■■■□□ 2.07
PTPN18-202ENST00000347849 RCAN3Q9UKA8 241 aa27.98■■■□□ 2.07
PTPN18-202ENST00000347849 RTL5Q5HYW3 569 aaPredicted RBP27.97■■■□□ 2.07
PTPN18-202ENST00000347849 CD163L1Q9NR16 1453 aa27.97■■■□□ 2.07
PTPN18-202ENST00000347849 NPM2Q86SE8 214 aaKnown RBP27.97■■■□□ 2.07
PTPN18-202ENST00000347849 TXNDC2Q86VQ3 553 aa27.97■■■□□ 2.07
PTPN18-202ENST00000347849 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
PTPN18-202ENST00000347849 TMEM2Q9UHN6 1383 aa27.96■■■□□ 2.07
PTPN18-202ENST00000347849 USP32Q8NFA0 1604 aa27.96■■■□□ 2.07
PTPN18-202ENST00000347849 MTHFSP49914 203 aa27.96■■■□□ 2.07
PTPN18-202ENST00000347849 ATAD2Q6PL18 1390 aa27.95■■■□□ 2.07
PTPN18-202ENST00000347849 ABCC11Q96J66 1382 aa27.95■■■□□ 2.07
PTPN18-202ENST00000347849 APAF1O14727 1248 aa27.95■■■□□ 2.07
PTPN18-202ENST00000347849 CABP1Q9NZU7 370 aa27.95■■■□□ 2.07
PTPN18-202ENST00000347849 ZNF521Q96K83 1311 aa27.94■■■□□ 2.06
PTPN18-202ENST00000347849 GGNBP2Q9H3C7 697 aa27.94■■■□□ 2.06
PTPN18-202ENST00000347849 UBR1Q8IWV7 1749 aa27.93■■■□□ 2.06
PTPN18-202ENST00000347849 LTKP29376 864 aa27.93■■■□□ 2.06
PTPN18-202ENST00000347849 DLC1Q96QB1 1528 aa27.92■■■□□ 2.06
PTPN18-202ENST00000347849 NINLQ9Y2I6 1382 aa27.91■■■□□ 2.06
PTPN18-202ENST00000347849 TCERG1O14776 1098 aaKnown RBP27.9■■■□□ 2.06
PTPN18-202ENST00000347849 FYB1O15117 783 aa27.89■■■□□ 2.06
PTPN18-202ENST00000347849 TERF2IPQ9NYB0 399 aa27.89■■■□□ 2.05
PTPN18-202ENST00000347849 PDE4AP27815 886 aa27.87■■■□□ 2.05
PTPN18-202ENST00000347849 SPINK5Q9NQ38 1064 aaPredicted RBP27.87■■■□□ 2.05
PTPN18-202ENST00000347849 HDGFP51858 240 aaKnown RBP27.87■■■□□ 2.05
PTPN18-202ENST00000347849 SHPRHQ149N8 1683 aa27.87■■■□□ 2.05
PTPN18-202ENST00000347849 DUSP27Q5VZP5 1158 aa27.86■■■□□ 2.05
PTPN18-202ENST00000347849 NSD2O96028 1365 aa27.86■■■□□ 2.05
PTPN18-202ENST00000347849 DMRT2Q9Y5R5 561 aa27.85■■■□□ 2.05
PTPN18-202ENST00000347849 NCKAP5LQ9HCH0 1330 aa27.85■■■□□ 2.05
PTPN18-202ENST00000347849 ADAMTS13Q76LX8 1427 aa27.85■■■□□ 2.05
PTPN18-202ENST00000347849 PLIN1O60240 522 aa27.84■■■□□ 2.05
PTPN18-202ENST00000347849 NLRP1Q9C000 1473 aa27.84■■■□□ 2.05
PTPN18-202ENST00000347849 GOLGA2Q08379 1002 aa27.84■■■□□ 2.05
PTPN18-202ENST00000347849 C3P01024 1663 aa27.83■■■□□ 2.04
PTPN18-202ENST00000347849 WASLO00401 505 aaPredicted RBP27.82■■■□□ 2.04
PTPN18-202ENST00000347849 HDGFL2Q7Z4V5 671 aaPredicted RBP27.82■■■□□ 2.04
PTPN18-202ENST00000347849 SLC26A8Q96RN1 970 aa27.82■■■□□ 2.04
PTPN18-202ENST00000347849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.8■■■□□ 2.044e-7■■■□□ 18.6
PTPN18-202ENST00000347849 BACH2Q9BYV9 841 aa27.8■■■□□ 2.04
PTPN18-202ENST00000347849 ROBO2Q9HCK4 1378 aa27.8■■■□□ 2.04
PTPN18-202ENST00000347849 SLFN5Q08AF3 891 aa27.8■■■□□ 2.04
PTPN18-202ENST00000347849 FBLN1P23142 703 aa27.79■■■□□ 2.04
PTPN18-202ENST00000347849 RRP7AQ9Y3A4 280 aaKnown RBP27.79■■■□□ 2.04
PTPN18-202ENST00000347849 TECPR2O15040 1411 aa27.78■■■□□ 2.04
PTPN18-202ENST00000347849 NEUROD2Q15784 382 aa27.77■■■□□ 2.04
PTPN18-202ENST00000347849 CFAP53Q96M91 514 aa27.77■■■□□ 2.04
PTPN18-202ENST00000347849 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
PTPN18-202ENST00000347849 PLEKHG1Q9ULL1 1385 aa27.76■■■□□ 2.03
PTPN18-202ENST00000347849 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.03
PTPN18-202ENST00000347849 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
PTPN18-202ENST00000347849 MS4A1P11836 297 aa27.75■■■□□ 2.03
PTPN18-202ENST00000347849 TRMT2AQ8IZ69 625 aaKnown RBP27.75■■■□□ 2.03
PTPN18-202ENST00000347849 NUDT16Q96DE0 195 aaKnown RBP27.74■■■□□ 2.03
PTPN18-202ENST00000347849 PPIP5K1Q6PFW1 1433 aa27.73■■■□□ 2.03
PTPN18-202ENST00000347849 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
PTPN18-202ENST00000347849 SIRT1Q96EB6 747 aa27.73■■■□□ 2.03
PTPN18-202ENST00000347849 TCP11L2Q8N4U5 519 aa27.73■■■□□ 2.03
PTPN18-202ENST00000347849 CPS1P31327 1500 aa27.72■■■□□ 2.03
PTPN18-202ENST00000347849 U2AF1L5P0DN76 240 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms