RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 GIMAP7Q8NHV1 300 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 CCDC94Q9BW85 323 aaPredicted RBP9.37□□□□□ -0.91
LIN28B-201ENST00000345080 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 IGF1RP08069 1367 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 SYNJ2O15056 1496 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 AK7Q96M32 723 aa9.37□□□□□ -0.91
LIN28B-201ENST00000345080 CIZ1Q9ULV3 898 aaPredicted RBP9.36□□□□□ -0.91
LIN28B-201ENST00000345080 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 PRIMPOLQ96LW4 560 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
LIN28B-201ENST00000345080 NUCB2P80303 420 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
LIN28B-201ENST00000345080 TPM4P67936 248 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 RGL3Q3MIN7 710 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 HS1BP3Q53T59 392 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 CREBRFQ8IUR6 639 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
LIN28B-201ENST00000345080 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
LIN28B-201ENST00000345080 BIVM-ERCC5R4GMW8 1640 aa9.35□□□□□ -0.91
LIN28B-201ENST00000345080 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
LIN28B-201ENST00000345080 CTDP1Q9Y5B0 961 aaPredicted RBP9.34□□□□□ -0.91
LIN28B-201ENST00000345080 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 PKD2Q13563 968 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 USP47Q96K76 1375 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 IPO8O15397 1037 aaKnown RBP9.34□□□□□ -0.91
LIN28B-201ENST00000345080 CLSTN1O94985 981 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 LRPPRCP42704 1394 aaKnown RBP9.34□□□□□ -0.91
LIN28B-201ENST00000345080 DNAJC5Q9H3Z4 198 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 PPP6R1Q9UPN7 881 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 NINLQ9Y2I6 1382 aa9.34□□□□□ -0.91
LIN28B-201ENST00000345080 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 STK26Q9P289 416 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 HMMRO75330 724 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 SSR1P43307 286 aaKnown RBP9.33□□□□□ -0.92
LIN28B-201ENST00000345080 LEKR1Q6ZMV7 388 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 MNS1Q8NEH6 495 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
LIN28B-201ENST00000345080 SUPT6HQ7KZ85 1726 aaKnown RBP9.33□□□□□ -0.92
LIN28B-201ENST00000345080 CFTRP13569 1480 aa9.33□□□□□ -0.92
LIN28B-201ENST00000345080 EXOC6Q8TAG9 804 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.921e-9■■■■□ 24.5
LIN28B-201ENST00000345080 FAM107BQ9H098 131 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 U2SURPO15042 1029 aaKnown RBP9.32□□□□□ -0.92
LIN28B-201ENST00000345080 HSP90B2PQ58FF3 399 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 MBD3O95983 291 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 HNRNPMP52272 730 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIN28B-201ENST00000345080 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
LIN28B-201ENST00000345080 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
LIN28B-201ENST00000345080 CENPHQ9H3R5 247 aa9.32□□□□□ -0.92
LIN28B-201ENST00000345080 WDR97A6NE52 1622 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 ST18O60284 1047 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 KCNJ4P48050 445 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 FAM193AP78312 1265 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 NUP155O75694 1391 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 MCM4P33991 863 aa9.31□□□□□ -0.92
LIN28B-201ENST00000345080 AMPHP49418 695 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 CBX1P83916 185 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 C1orf141Q5JVX7 400 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 OFD1O75665 1012 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 ATP6V1DQ9Y5K8 247 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 CDR1P51861 262 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
LIN28B-201ENST00000345080 NOL10Q9BSC4 688 aaKnown RBP9.3□□□□□ -0.92
LIN28B-201ENST00000345080 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
LIN28B-201ENST00000345080 GTF2A1P52655 376 aaPredicted RBP9.3□□□□□ -0.92
LIN28B-201ENST00000345080 TTLL5Q6EMB2 1281 aa9.29□□□□□ -0.92
LIN28B-201ENST00000345080 POLD1P28340 1107 aa9.29□□□□□ -0.92
LIN28B-201ENST00000345080 CUL7Q14999 1698 aa9.29□□□□□ -0.92
LIN28B-201ENST00000345080 THOC2Q8NI27 1593 aaKnown RBP9.29□□□□□ -0.92
LIN28B-201ENST00000345080 CCP110O43303 1012 aa9.29□□□□□ -0.92
LIN28B-201ENST00000345080 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 MFAP1P55081 439 aaKnown RBP9.28□□□□□ -0.92
LIN28B-201ENST00000345080 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 FEZ1Q99689 392 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 SNAPC4Q5SXM2 1469 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 TXNDC2Q86VQ3 553 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 PES1O00541 588 aaKnown RBP9.28□□□□□ -0.92
LIN28B-201ENST00000345080 ERCC4Q92889 916 aaPredicted RBP9.28□□□□□ -0.92
LIN28B-201ENST00000345080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
LIN28B-201ENST00000345080 DNAJC5BQ9UF47 199 aa9.28□□□□□ -0.92
LIN28B-201ENST00000345080 FAM184AQ8NB25 1140 aa9.27□□□□□ -0.92
LIN28B-201ENST00000345080 MAGI1Q96QZ7 1491 aaPredicted RBP9.27□□□□□ -0.92
LIN28B-201ENST00000345080 TDO2P48775 406 aa9.27□□□□□ -0.93
LIN28B-201ENST00000345080 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
LIN28B-201ENST00000345080 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
LIN28B-201ENST00000345080 SOX12O15370 315 aa9.27□□□□□ -0.93
LIN28B-201ENST00000345080 TPM1P09493 284 aa9.27□□□□□ -0.93
LIN28B-201ENST00000345080 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
LIN28B-201ENST00000345080 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
LIN28B-201ENST00000345080 TXLNBQ8N3L3 684 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms