RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 CABP2Q9NPB3 220 aa11.49□□□□□ -0.57
AC008543.1-201ENST00000344893 PANK3Q9H999 370 aa11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 USP19O94966 1318 aa11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 GRPEL1Q9HAV7 217 aa11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
AC008543.1-201ENST00000344893 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 HSPA2P54652 639 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 E9PCH4 1651 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
AC008543.1-201ENST00000344893 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.57
AC008543.1-201ENST00000344893 MCM4P33991 863 aa11.46□□□□□ -0.57
AC008543.1-201ENST00000344893 KDM5CP41229 1560 aa11.46□□□□□ -0.58
AC008543.1-201ENST00000344893 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 ZHX1Q9UKY1 873 aaPredicted RBP11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 TRAK2O60296 914 aa11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 ABCC3O15438 1527 aa11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
AC008543.1-201ENST00000344893 UNC13BO14795 1591 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 SEC24BO95487 1268 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 PDIA4P13667 645 aaKnown RBP11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 RIPK4P57078 832 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 IQGAP3Q86VI3 1631 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 GLI2P10070 1586 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 RICTORQ6R327 1708 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 PPRC1Q5VV67 1664 aaKnown RBP11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 EID1Q9Y6B2 187 aa11.44□□□□□ -0.58
AC008543.1-201ENST00000344893 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 SMAP1Q8IYB5 467 aaPredicted RBP11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 ARID3AQ99856 593 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 KNSTRNQ9Y448 316 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 NCKAP5LQ9HCH0 1330 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 LTKP29376 864 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
AC008543.1-201ENST00000344893 KDM5DQ9BY66 1539 aa11.42□□□□□ -0.58
AC008543.1-201ENST00000344893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.58
AC008543.1-201ENST00000344893 TNRQ92752 1358 aa11.42□□□□□ -0.58
AC008543.1-201ENST00000344893 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
AC008543.1-201ENST00000344893 MROH1Q8NDA8 1641 aa11.41□□□□□ -0.58
AC008543.1-201ENST00000344893 EFCAB6Q5THR3 1501 aa11.41□□□□□ -0.58
AC008543.1-201ENST00000344893 TESK2Q96S53 571 aa11.41□□□□□ -0.58
AC008543.1-201ENST00000344893 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
AC008543.1-201ENST00000344893 TBC1D2Q9BYX2 928 aa11.4□□□□□ -0.58
AC008543.1-201ENST00000344893 RALBP1Q15311 655 aa11.4□□□□□ -0.58
AC008543.1-201ENST00000344893 OFD1O75665 1012 aa11.39□□□□□ -0.59
AC008543.1-201ENST00000344893 C14orf93Q9H972 538 aaKnown RBP11.39□□□□□ -0.59
AC008543.1-201ENST00000344893 FBLN1P23142 703 aa11.39□□□□□ -0.59
AC008543.1-201ENST00000344893 PTPRTO14522 1441 aa11.39□□□□□ -0.59
AC008543.1-201ENST00000344893 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
AC008543.1-201ENST00000344893 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
AC008543.1-201ENST00000344893 ISY1Q9ULR0 285 aaKnown RBP11.38□□□□□ -0.59
AC008543.1-201ENST00000344893 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
AC008543.1-201ENST00000344893 TET3O43151 1660 aa11.38□□□□□ -0.59
AC008543.1-201ENST00000344893 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
AC008543.1-201ENST00000344893 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 CLTCQ00610 1675 aaKnown RBP11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 TRPM2O94759 1503 aa11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 RNF17Q9BXT8 1623 aaKnown RBP11.37□□□□□ -0.59
AC008543.1-201ENST00000344893 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 TERF1P54274 439 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 NUTM2GQ5VZR2 741 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 ZSCAN30Q86W11 494 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 SPHKAPQ2M3C7 1700 aa11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
AC008543.1-201ENST00000344893 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 SIGLEC1Q9BZZ2 1709 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 MSNP26038 577 aaKnown RBP11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 CHMP5Q9NZZ3 219 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
AC008543.1-201ENST00000344893 EIF3AQ14152 1382 aaKnown RBP11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 CDK19Q9BWU1 502 aa11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 CHMP4BQ9H444 224 aaKnown RBP11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
AC008543.1-201ENST00000344893 UQCRHLA0A096LP55 91 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 UQCRHP07919 91 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms