RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
AC008543.1-201ENST00000344893 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
AC008543.1-201ENST00000344893 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
AC008543.1-201ENST00000344893 ABCC9O60706 1549 aa15.5■□□□□ 0.07
AC008543.1-201ENST00000344893 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
AC008543.1-201ENST00000344893 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
AC008543.1-201ENST00000344893 HRCP23327 699 aa15.26■□□□□ 0.03
AC008543.1-201ENST00000344893 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.02
AC008543.1-201ENST00000344893 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
AC008543.1-201ENST00000344893 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
AC008543.1-201ENST00000344893 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
AC008543.1-201ENST00000344893 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
AC008543.1-201ENST00000344893 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
AC008543.1-201ENST00000344893 MYT1Q01538 1121 aa14.79□□□□□ -0.04
AC008543.1-201ENST00000344893 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
AC008543.1-201ENST00000344893 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
AC008543.1-201ENST00000344893 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
AC008543.1-201ENST00000344893 NACADO15069 1562 aa14.55□□□□□ -0.08
AC008543.1-201ENST00000344893 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
AC008543.1-201ENST00000344893 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
AC008543.1-201ENST00000344893 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
AC008543.1-201ENST00000344893 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
AC008543.1-201ENST00000344893 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
AC008543.1-201ENST00000344893 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
AC008543.1-201ENST00000344893 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 TRIM26Q12899 539 aaPredicted RBP14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
AC008543.1-201ENST00000344893 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
AC008543.1-201ENST00000344893 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
AC008543.1-201ENST00000344893 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
AC008543.1-201ENST00000344893 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
AC008543.1-201ENST00000344893 WIZO95785 1651 aa14.06□□□□□ -0.16
AC008543.1-201ENST00000344893 TRIM41Q8WV44 630 aa14.02□□□□□ -0.16
AC008543.1-201ENST00000344893 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
AC008543.1-201ENST00000344893 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
AC008543.1-201ENST00000344893 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
AC008543.1-201ENST00000344893 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
AC008543.1-201ENST00000344893 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
AC008543.1-201ENST00000344893 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
AC008543.1-201ENST00000344893 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
AC008543.1-201ENST00000344893 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
AC008543.1-201ENST00000344893 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
AC008543.1-201ENST00000344893 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
AC008543.1-201ENST00000344893 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
AC008543.1-201ENST00000344893 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
AC008543.1-201ENST00000344893 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
AC008543.1-201ENST00000344893 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
AC008543.1-201ENST00000344893 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
AC008543.1-201ENST00000344893 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
AC008543.1-201ENST00000344893 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
AC008543.1-201ENST00000344893 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
AC008543.1-201ENST00000344893 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
AC008543.1-201ENST00000344893 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
AC008543.1-201ENST00000344893 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
AC008543.1-201ENST00000344893 NESP48681 1621 aa13.53□□□□□ -0.24
AC008543.1-201ENST00000344893 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
AC008543.1-201ENST00000344893 SOGA1O94964 1423 aa13.47□□□□□ -0.25
AC008543.1-201ENST00000344893 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
AC008543.1-201ENST00000344893 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
AC008543.1-201ENST00000344893 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
AC008543.1-201ENST00000344893 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
AC008543.1-201ENST00000344893 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
AC008543.1-201ENST00000344893 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
AC008543.1-201ENST00000344893 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
AC008543.1-201ENST00000344893 MIER1Q8N108 512 aa13.35□□□□□ -0.27
AC008543.1-201ENST00000344893 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
AC008543.1-201ENST00000344893 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
AC008543.1-201ENST00000344893 FBLN2P98095 1184 aa13.31□□□□□ -0.28
AC008543.1-201ENST00000344893 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
AC008543.1-201ENST00000344893 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 CFTRP13569 1480 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
AC008543.1-201ENST00000344893 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
AC008543.1-201ENST00000344893 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 CUX2O14529 1486 aa13.21□□□□□ -0.29
AC008543.1-201ENST00000344893 CUX1P39880 1505 aa13.21□□□□□ -0.3
AC008543.1-201ENST00000344893 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
AC008543.1-201ENST00000344893 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
AC008543.1-201ENST00000344893 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
AC008543.1-201ENST00000344893 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
AC008543.1-201ENST00000344893 APLP2Q06481 763 aa13.12□□□□□ -0.31
AC008543.1-201ENST00000344893 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
AC008543.1-201ENST00000344893 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
AC008543.1-201ENST00000344893 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
AC008543.1-201ENST00000344893 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
AC008543.1-201ENST00000344893 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC008543.1-201ENST00000344893 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
AC008543.1-201ENST00000344893 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
AC008543.1-201ENST00000344893 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
AC008543.1-201ENST00000344893 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms