RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PTPRMP28827 1452 aa13.71□□□□□ -0.21
CAPRIN1-201ENST00000341394 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.22
CAPRIN1-201ENST00000341394 EID1Q9Y6B2 187 aa13.71□□□□□ -0.22
CAPRIN1-201ENST00000341394 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
CAPRIN1-201ENST00000341394 TNRQ92752 1358 aa13.7□□□□□ -0.22
CAPRIN1-201ENST00000341394 PLIN1O60240 522 aa13.7□□□□□ -0.22
CAPRIN1-201ENST00000341394 UBR1Q8IWV7 1749 aa13.69□□□□□ -0.22
CAPRIN1-201ENST00000341394 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
CAPRIN1-201ENST00000341394 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
CAPRIN1-201ENST00000341394 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
CAPRIN1-201ENST00000341394 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
CAPRIN1-201ENST00000341394 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
CAPRIN1-201ENST00000341394 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
CAPRIN1-201ENST00000341394 TXNDC2Q86VQ3 553 aa13.68□□□□□ -0.22
CAPRIN1-201ENST00000341394 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
CAPRIN1-201ENST00000341394 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
CAPRIN1-201ENST00000341394 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CAPRIN1-201ENST00000341394 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
CAPRIN1-201ENST00000341394 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
CAPRIN1-201ENST00000341394 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
CAPRIN1-201ENST00000341394 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
CAPRIN1-201ENST00000341394 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
CAPRIN1-201ENST00000341394 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 ARID3AQ99856 593 aa13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 MSH5O43196 834 aa13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-201ENST00000341394 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-201ENST00000341394 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-201ENST00000341394 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
CAPRIN1-201ENST00000341394 LTKP29376 864 aa13.63□□□□□ -0.23
CAPRIN1-201ENST00000341394 METP08581 1390 aa13.63□□□□□ -0.23
CAPRIN1-201ENST00000341394 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
CAPRIN1-201ENST00000341394 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
CAPRIN1-201ENST00000341394 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-201ENST00000341394 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
CAPRIN1-201ENST00000341394 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
CAPRIN1-201ENST00000341394 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-201ENST00000341394 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
CAPRIN1-201ENST00000341394 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
CAPRIN1-201ENST00000341394 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
CAPRIN1-201ENST00000341394 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-201ENST00000341394 SKAP1Q86WV1 359 aa13.61□□□□□ -0.23
CAPRIN1-201ENST00000341394 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
CAPRIN1-201ENST00000341394 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
CAPRIN1-201ENST00000341394 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
CAPRIN1-201ENST00000341394 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
CAPRIN1-201ENST00000341394 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
CAPRIN1-201ENST00000341394 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
CAPRIN1-201ENST00000341394 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
CAPRIN1-201ENST00000341394 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-201ENST00000341394 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
CAPRIN1-201ENST00000341394 PNISRQ8TF01 805 aaKnown RBP13.57□□□□□ -0.24
CAPRIN1-201ENST00000341394 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
CAPRIN1-201ENST00000341394 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
CAPRIN1-201ENST00000341394 RALBP1Q15311 655 aa13.56□□□□□ -0.24
CAPRIN1-201ENST00000341394 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
CAPRIN1-201ENST00000341394 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
CAPRIN1-201ENST00000341394 NCLP19338 710 aaKnown RBP13.55□□□□□ -0.24
CAPRIN1-201ENST00000341394 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
CAPRIN1-201ENST00000341394 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
CAPRIN1-201ENST00000341394 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
CAPRIN1-201ENST00000341394 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
CAPRIN1-201ENST00000341394 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
CAPRIN1-201ENST00000341394 NLRP1Q9C000 1473 aa13.52□□□□□ -0.24
CAPRIN1-201ENST00000341394 NSD3Q9BZ95 1437 aa13.52□□□□□ -0.24
CAPRIN1-201ENST00000341394 PTPRUQ92729 1446 aa13.52□□□□□ -0.25
CAPRIN1-201ENST00000341394 CDK19Q9BWU1 502 aa13.52□□□□□ -0.25
CAPRIN1-201ENST00000341394 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
CAPRIN1-201ENST00000341394 CD163L1Q9NR16 1453 aa13.51□□□□□ -0.25
CAPRIN1-201ENST00000341394 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
CAPRIN1-201ENST00000341394 LRPPRCP42704 1394 aaKnown RBP13.51□□□□□ -0.25
CAPRIN1-201ENST00000341394 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
CAPRIN1-201ENST00000341394 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
CAPRIN1-201ENST00000341394 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
CAPRIN1-201ENST00000341394 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
CAPRIN1-201ENST00000341394 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
CAPRIN1-201ENST00000341394 SLIT1O75093 1534 aa13.49□□□□□ -0.25
CAPRIN1-201ENST00000341394 AMOTL2Q9Y2J4 779 aa13.48□□□□□ -0.25
CAPRIN1-201ENST00000341394 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
CAPRIN1-201ENST00000341394 MED14O60244 1454 aa13.48□□□□□ -0.25
CAPRIN1-201ENST00000341394 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
CAPRIN1-201ENST00000341394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAPRIN1-201ENST00000341394 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.25
CAPRIN1-201ENST00000341394 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.26
CAPRIN1-201ENST00000341394 CPS1P31327 1500 aa13.46□□□□□ -0.26
CAPRIN1-201ENST00000341394 PDE4AP27815 886 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms