RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
ATXN3-201ENST00000340660 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
ATXN3-201ENST00000340660 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
ATXN3-201ENST00000340660 SF3B2Q13435 895 aaKnown RBP18.89■□□□□ 0.61
ATXN3-201ENST00000340660 TRPC6Q9Y210 931 aa18.89■□□□□ 0.61
ATXN3-201ENST00000340660 MBD5Q9P267 1494 aa18.89■□□□□ 0.61
ATXN3-201ENST00000340660 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
ATXN3-201ENST00000340660 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
ATXN3-201ENST00000340660 ATF3P18847 181 aa18.87■□□□□ 0.61
ATXN3-201ENST00000340660 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
ATXN3-201ENST00000340660 PIK3C2BO00750 1634 aa18.86■□□□□ 0.61
ATXN3-201ENST00000340660 UNC13BO14795 1591 aa18.86■□□□□ 0.61
ATXN3-201ENST00000340660 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
ATXN3-201ENST00000340660 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
ATXN3-201ENST00000340660 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
ATXN3-201ENST00000340660 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
ATXN3-201ENST00000340660 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
ATXN3-201ENST00000340660 CHD2O14647 1828 aaKnown RBP18.84■□□□□ 0.61
ATXN3-201ENST00000340660 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
ATXN3-201ENST00000340660 SGIP1Q9BQI5 828 aa18.83■□□□□ 0.6
ATXN3-201ENST00000340660 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
ATXN3-201ENST00000340660 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
ATXN3-201ENST00000340660 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
ATXN3-201ENST00000340660 PCDHB13Q9Y5F0 798 aa18.81■□□□□ 0.6
ATXN3-201ENST00000340660 UTRNP46939 3433 aa18.8■□□□□ 0.6
ATXN3-201ENST00000340660 ATN1P54259 1190 aaPredicted RBP18.8■□□□□ 0.6
ATXN3-201ENST00000340660 IFNLR1Q8IU57 520 aaPredicted RBP18.8■□□□□ 0.6
ATXN3-201ENST00000340660 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
ATXN3-201ENST00000340660 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
ATXN3-201ENST00000340660 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
ATXN3-201ENST00000340660 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
ATXN3-201ENST00000340660 TIE1P35590 1138 aa18.77■□□□□ 0.6
ATXN3-201ENST00000340660 BRWD3Q6RI45 1802 aa18.76■□□□□ 0.59
ATXN3-201ENST00000340660 SPHKAPQ2M3C7 1700 aa18.75■□□□□ 0.59
ATXN3-201ENST00000340660 BAG6P46379 1132 aa18.75■□□□□ 0.59
ATXN3-201ENST00000340660 IFNL1Q8IU54 200 aa18.75■□□□□ 0.59
ATXN3-201ENST00000340660 CEP152O94986 1710 aa18.74■□□□□ 0.59
ATXN3-201ENST00000340660 CAMTA1Q9Y6Y1 1673 aa18.74■□□□□ 0.59
ATXN3-201ENST00000340660 GLI3P10071 1580 aa18.74■□□□□ 0.59
ATXN3-201ENST00000340660 BCANQ96GW7 911 aa18.74■□□□□ 0.59
ATXN3-201ENST00000340660 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
ATXN3-201ENST00000340660 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
ATXN3-201ENST00000340660 SLC39A7Q92504 469 aa18.73■□□□□ 0.59
ATXN3-201ENST00000340660 METRNQ9UJH8 293 aa18.73■□□□□ 0.59
ATXN3-201ENST00000340660 MST1RQ04912 1400 aa18.73■□□□□ 0.59
ATXN3-201ENST00000340660 PYGBP11216 843 aa18.72■□□□□ 0.59
ATXN3-201ENST00000340660 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
ATXN3-201ENST00000340660 EN1Q05925 392 aaPredicted RBP18.7■□□□□ 0.58
ATXN3-201ENST00000340660 DCCP43146 1447 aa18.69■□□□□ 0.58
ATXN3-201ENST00000340660 TTLL13PA6NNM8 815 aa18.69■□□□□ 0.58
ATXN3-201ENST00000340660 SLC34A2O95436 690 aa18.69■□□□□ 0.58
ATXN3-201ENST00000340660 C7P10643 843 aa18.69■□□□□ 0.58
ATXN3-201ENST00000340660 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
ATXN3-201ENST00000340660 NINLQ9Y2I6 1382 aa18.68■□□□□ 0.58
ATXN3-201ENST00000340660 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
ATXN3-201ENST00000340660 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
ATXN3-201ENST00000340660 IDI1Q13907 227 aa18.67■□□□□ 0.58
ATXN3-201ENST00000340660 GSE1Q14687 1217 aa18.67■□□□□ 0.58
ATXN3-201ENST00000340660 SEPT12Q8IYM1 358 aa18.65■□□□□ 0.58
ATXN3-201ENST00000340660 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
ATXN3-201ENST00000340660 SPOCK2Q92563 424 aa18.64■□□□□ 0.57
ATXN3-201ENST00000340660 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
ATXN3-201ENST00000340660 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
ATXN3-201ENST00000340660 MYOM2P54296 1465 aa18.61■□□□□ 0.57
ATXN3-201ENST00000340660 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
ATXN3-201ENST00000340660 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
ATXN3-201ENST00000340660 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
ATXN3-201ENST00000340660 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
ATXN3-201ENST00000340660 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
ATXN3-201ENST00000340660 ZFYVE9O95405 1425 aa18.59■□□□□ 0.57
ATXN3-201ENST00000340660 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
ATXN3-201ENST00000340660 EIF2AK4Q9P2K8 1649 aaKnown RBP18.58■□□□□ 0.56
ATXN3-201ENST00000340660 LAMC1P11047 1609 aa18.57■□□□□ 0.56
ATXN3-201ENST00000340660 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
ATXN3-201ENST00000340660 OTUD5Q96G74 571 aa18.57■□□□□ 0.56
ATXN3-201ENST00000340660 ADAMTS13Q76LX8 1427 aa18.57■□□□□ 0.56
ATXN3-201ENST00000340660 POTEFA5A3E0 1075 aa18.56■□□□□ 0.56
ATXN3-201ENST00000340660 EZH2Q15910 746 aaKnown RBP18.56■□□□□ 0.56
ATXN3-201ENST00000340660 UNC5CLQ8IV45 518 aa18.56■□□□□ 0.56
ATXN3-201ENST00000340660 TRIM35Q9UPQ4 493 aa18.56■□□□□ 0.56
ATXN3-201ENST00000340660 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
ATXN3-201ENST00000340660 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
ATXN3-201ENST00000340660 PCDHB8Q9UN66 801 aa18.55■□□□□ 0.56
ATXN3-201ENST00000340660 TMEM106CQ9BVX2 250 aa18.54■□□□□ 0.56
ATXN3-201ENST00000340660 PTPRUQ92729 1446 aa18.54■□□□□ 0.56
ATXN3-201ENST00000340660 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
ATXN3-201ENST00000340660 TRPM2O94759 1503 aa18.54■□□□□ 0.56
ATXN3-201ENST00000340660 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
ATXN3-201ENST00000340660 SLIT2O94813 1529 aa18.53■□□□□ 0.56
ATXN3-201ENST00000340660 ONECUT3O60422 494 aaPredicted RBP18.52■□□□□ 0.56
ATXN3-201ENST00000340660 CHRM1P11229 460 aaPredicted RBP18.52■□□□□ 0.56
ATXN3-201ENST00000340660 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
ATXN3-201ENST00000340660 PIK3R4Q99570 1358 aa18.52■□□□□ 0.55
ATXN3-201ENST00000340660 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.55
ATXN3-201ENST00000340660 AMOTL2Q9Y2J4 779 aa18.51■□□□□ 0.55
ATXN3-201ENST00000340660 EEA1Q15075 1411 aa18.49■□□□□ 0.55
ATXN3-201ENST00000340660 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
ATXN3-201ENST00000340660 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
ATXN3-201ENST00000340660 FYCO1Q9BQS8 1478 aa18.48■□□□□ 0.55
ATXN3-201ENST00000340660 KCNQ2O43526 872 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms