RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 FAM184AQ8NB25 1140 aa9.49□□□□□ -0.89
TRIM2-201ENST00000338700 PRXQ9BXM0 1461 aa9.49□□□□□ -0.89
TRIM2-201ENST00000338700 VPS37DQ86XT2 251 aa9.49□□□□□ -0.89
TRIM2-201ENST00000338700 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
TRIM2-201ENST00000338700 IFIT2P09913 472 aaKnown RBP9.49□□□□□ -0.89
TRIM2-201ENST00000338700 USP35Q9P2H5 1018 aa9.49□□□□□ -0.89
TRIM2-201ENST00000338700 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
TRIM2-201ENST00000338700 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 GNAI1P63096 354 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
TRIM2-201ENST00000338700 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
TRIM2-201ENST00000338700 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
TRIM2-201ENST00000338700 NLRP6P59044 892 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
TRIM2-201ENST00000338700 TNNT3P45378 269 aaPredicted RBP9.48□□□□□ -0.89
TRIM2-201ENST00000338700 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
TRIM2-201ENST00000338700 G3BP1Q13283 466 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRIM2-201ENST00000338700 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
TRIM2-201ENST00000338700 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
TRIM2-201ENST00000338700 CREBRFQ8IUR6 639 aa9.47□□□□□ -0.89
TRIM2-201ENST00000338700 CABP2Q9NPB3 220 aa9.46□□□□□ -0.89
TRIM2-201ENST00000338700 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.89
TRIM2-201ENST00000338700 ATP6V1DQ9Y5K8 247 aa9.46□□□□□ -0.89
TRIM2-201ENST00000338700 WDR7Q9Y4E6 1490 aa9.46□□□□□ -0.89
TRIM2-201ENST00000338700 FBXW7Q969H0 707 aa9.46□□□□□ -0.89
TRIM2-201ENST00000338700 GOLGA6L3A6NEY3 463 aa9.46□□□□□ -0.9
TRIM2-201ENST00000338700 TMEM132EQ6IEE7 984 aa9.46□□□□□ -0.9
TRIM2-201ENST00000338700 DZIP1LQ8IYY4 767 aaKnown RBP9.46□□□□□ -0.9
TRIM2-201ENST00000338700 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
TRIM2-201ENST00000338700 HSP90AB4PQ58FF6 505 aa9.46□□□□□ -0.9
TRIM2-201ENST00000338700 CRBNQ96SW2 442 aa9.46□□□□□ -0.9
TRIM2-201ENST00000338700 PPP1R1BQ9UD71 204 aaPredicted RBP9.46□□□□□ -0.9
TRIM2-201ENST00000338700 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 TCEAL9Q9UHQ7 104 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 CCDC141Q6ZP82 1450 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 PLIN1O60240 522 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 ZKSCAN1P17029 563 aaPredicted RBP9.45□□□□□ -0.9
TRIM2-201ENST00000338700 TRIM29Q14134 588 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 ARID3AQ99856 593 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 TPD52L1Q16890 204 aaPredicted RBP9.45□□□□□ -0.9
TRIM2-201ENST00000338700 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
TRIM2-201ENST00000338700 REC8O95072 547 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 APPP05067 770 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 HMOX1P09601 288 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
TRIM2-201ENST00000338700 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 RAD21O60216 631 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
TRIM2-201ENST00000338700 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 TOM1L2Q6ZVM7 507 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 TPM2P07951 284 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 TRDNQ13061 729 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
TRIM2-201ENST00000338700 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
TRIM2-201ENST00000338700 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
TRIM2-201ENST00000338700 ANO2Q9NQ90 1003 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 PRDM11Q9NQV5 511 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 TPM3P06753 285 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 EXOC6Q8TAG9 804 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 FAM135AQ9P2D6 1515 aa9.43□□□□□ -0.9
TRIM2-201ENST00000338700 LRPPRCP42704 1394 aaKnown RBP9.43□□□□□ -0.9
TRIM2-201ENST00000338700 ERC2O15083 957 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 TNRQ92752 1358 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 ERICH2A1L162 156 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 MSH6P52701 1360 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
TRIM2-201ENST00000338700 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
TRIM2-201ENST00000338700 PES1O00541 588 aaKnown RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 PLEKHO1Q53GL0 409 aaPredicted RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 CPLX1O14810 134 aa9.41□□□□□ -0.9
TRIM2-201ENST00000338700 CCDC47Q96A33 483 aaKnown RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
TRIM2-201ENST00000338700 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
TRIM2-201ENST00000338700 ARAP1Q96P48 1450 aa9.41□□□□□ -0.9
TRIM2-201ENST00000338700 AIMP1Q12904 312 aaKnown RBP9.41□□□□□ -0.9
TRIM2-201ENST00000338700 ERBINQ96RT1 1412 aa9.4□□□□□ -0.9
TRIM2-201ENST00000338700 NFXL1Q6ZNB6 911 aa9.4□□□□□ -0.9
TRIM2-201ENST00000338700 AAMPQ13685 434 aa9.4□□□□□ -0.9
TRIM2-201ENST00000338700 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
TRIM2-201ENST00000338700 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
TRIM2-201ENST00000338700 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
TRIM2-201ENST00000338700 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.91
TRIM2-201ENST00000338700 PBRM1Q86U86 1689 aa9.4□□□□□ -0.91
TRIM2-201ENST00000338700 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms