RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NPHP4O75161 1426 aaPredicted RBP32.07■■■□□ 2.72
TSEN54-201ENST00000333213 ANP32CO43423 234 aa32.06■■■□□ 2.72
TSEN54-201ENST00000333213 AMOTL2Q9Y2J4 779 aa32.06■■■□□ 2.72
TSEN54-201ENST00000333213 EVC2Q86UK5 1308 aa32.06■■■□□ 2.72
TSEN54-201ENST00000333213 PANK3Q9H999 370 aa32.04■■■□□ 2.72
TSEN54-201ENST00000333213 LMTK3Q96Q04 1460 aa32.04■■■□□ 2.72
TSEN54-201ENST00000333213 PER1O15534 1290 aaPredicted RBP32.04■■■□□ 2.72
TSEN54-201ENST00000333213 HSPA2P54652 639 aa32.04■■■□□ 2.72
TSEN54-201ENST00000333213 CABP2Q9NPB3 220 aa32.01■■■□□ 2.71
TSEN54-201ENST00000333213 PIK3R4Q99570 1358 aa32.01■■■□□ 2.71
TSEN54-201ENST00000333213 XRN1Q8IZH2 1706 aaKnown RBP32.01■■■□□ 2.71
TSEN54-201ENST00000333213 PUS7Q96PZ0 661 aaKnown RBP31.99■■■□□ 2.71
TSEN54-201ENST00000333213 PTCH1Q13635 1447 aa31.97■■■□□ 2.71
TSEN54-201ENST00000333213 KCNA6P17658 529 aa31.96■■■□□ 2.71
TSEN54-201ENST00000333213 PRKRIP1Q9H875 184 aaPredicted RBP31.96■■■□□ 2.71
TSEN54-201ENST00000333213 CDK19Q9BWU1 502 aa31.96■■■□□ 2.71
TSEN54-201ENST00000333213 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.95■■■□□ 2.71
TSEN54-201ENST00000333213 CHD2O14647 1828 aaKnown RBP31.95■■■□□ 2.7
TSEN54-201ENST00000333213 SLC12A5Q9H2X9 1139 aa31.94■■■□□ 2.7
TSEN54-201ENST00000333213 SRPK2P78362 688 aaKnown RBP31.94■■■□□ 2.7
TSEN54-201ENST00000333213 WASLO00401 505 aaPredicted RBP31.9■■■□□ 2.7
TSEN54-201ENST00000333213 CNGB1Q14028 1251 aaPredicted RBP31.9■■■□□ 2.7
TSEN54-201ENST00000333213 TMC1Q8TDI8 760 aa31.9■■■□□ 2.7
TSEN54-201ENST00000333213 CARD14Q9BXL6 1004 aa31.88■■■□□ 2.69
TSEN54-201ENST00000333213 ADGRB2O60241 1585 aa31.86■■■□□ 2.69
TSEN54-201ENST00000333213 ATAD2Q6PL18 1390 aa31.86■■■□□ 2.69
TSEN54-201ENST00000333213 CCER2I3L3R5 266 aa31.84■■■□□ 2.69
TSEN54-201ENST00000333213 STRCQ7RTU9 1775 aa31.83■■■□□ 2.69
TSEN54-201ENST00000333213 GTF3C3Q9Y5Q9 886 aa31.82■■■□□ 2.68
TSEN54-201ENST00000333213 AMER1Q5JTC6 1135 aaPredicted RBP31.81■■■□□ 2.68
TSEN54-201ENST00000333213 KNSTRNQ9Y448 316 aa31.8■■■□□ 2.68
TSEN54-201ENST00000333213 NWD1Q149M9 1564 aa31.79■■■□□ 2.68
TSEN54-201ENST00000333213 NINLQ9Y2I6 1382 aa31.78■■■□□ 2.68
TSEN54-201ENST00000333213 CD163L1Q9NR16 1453 aa31.78■■■□□ 2.68
TSEN54-201ENST00000333213 CC2D1BQ5T0F9 858 aaKnown RBP31.78■■■□□ 2.68
TSEN54-201ENST00000333213 RBM33Q96EV2 1170 aaKnown RBP31.78■■■□□ 2.68
TSEN54-201ENST00000333213 ANKRD36BQ8N2N9 1353 aa31.78■■■□□ 2.68
TSEN54-201ENST00000333213 CCDC184Q52MB2 194 aa31.77■■■□□ 2.68
TSEN54-201ENST00000333213 CABP1Q9NZU7 370 aa31.77■■■□□ 2.68
TSEN54-201ENST00000333213 PRR36Q9H6K5 1346 aa31.77■■■□□ 2.68
TSEN54-201ENST00000333213 PARD3Q8TEW0 1356 aa31.76■■■□□ 2.67
TSEN54-201ENST00000333213 ATP7BP35670 1465 aa31.75■■■□□ 2.67
TSEN54-201ENST00000333213 NUDT16Q96DE0 195 aaKnown RBP31.75■■■□□ 2.67
TSEN54-201ENST00000333213 A0A1W2PP64 1363 aa31.75■■■□□ 2.67
TSEN54-201ENST00000333213 KTN1Q86UP2 1357 aaKnown RBP31.75■■■□□ 2.67
TSEN54-201ENST00000333213 NSD3Q9BZ95 1437 aa31.73■■■□□ 2.67
TSEN54-201ENST00000333213 RALBP1Q15311 655 aa31.71■■■□□ 2.67
TSEN54-201ENST00000333213 NALCNQ8IZF0 1738 aa31.7■■■□□ 2.67
TSEN54-201ENST00000333213 STRCP1A6NGW2 1772 aa31.7■■■□□ 2.67
TSEN54-201ENST00000333213 NUTM2FA1L443 756 aa31.7■■■□□ 2.67
TSEN54-201ENST00000333213 CCDC61Q9Y6R9 512 aa31.7■■■□□ 2.67
TSEN54-201ENST00000333213 PPIP5K1Q6PFW1 1433 aa31.7■■■□□ 2.67
TSEN54-201ENST00000333213 NPC1L1Q9UHC9 1359 aa31.7■■■□□ 2.66
TSEN54-201ENST00000333213 USP32Q8NFA0 1604 aa31.68■■■□□ 2.66
TSEN54-201ENST00000333213 TERF2IPQ9NYB0 399 aa31.65■■■□□ 2.66
TSEN54-201ENST00000333213 NKTRP30414 1462 aaKnown RBP31.64■■■□□ 2.66
TSEN54-201ENST00000333213 TOPAZ1Q8N9V7 1692 aa31.64■■■□□ 2.66
TSEN54-201ENST00000333213 MYBBP1AQ9BQG0 1328 aaKnown RBP31.64■■■□□ 2.66
TSEN54-201ENST00000333213 CPSF1Q10570 1443 aaKnown RBP31.63■■■□□ 2.65
TSEN54-201ENST00000333213 ADGRL3Q9HAR2 1447 aa31.63■■■□□ 2.65
TSEN54-201ENST00000333213 YTHDC1Q96MU7 727 aaKnown RBP31.62■■■□□ 2.65
TSEN54-201ENST00000333213 CDC42BPGQ6DT37 1551 aa31.61■■■□□ 2.65
TSEN54-201ENST00000333213 HDGFL2Q7Z4V5 671 aaPredicted RBP31.61■■■□□ 2.65
TSEN54-201ENST00000333213 PROSER2Q86WR7 435 aaPredicted RBP31.61■■■□□ 2.65
TSEN54-201ENST00000333213 FMN2Q9NZ56 1722 aa31.6■■■□□ 2.65
TSEN54-201ENST00000333213 RGPD8O14715 1765 aaPredicted RBP31.6■■■□□ 2.65
TSEN54-201ENST00000333213 MRS2Q9HD23 443 aa31.59■■■□□ 2.65
TSEN54-201ENST00000333213 CGNL1Q0VF96 1302 aa31.57■■■□□ 2.65
TSEN54-201ENST00000333213 PLEKHG3A1L390 1219 aa31.57■■■□□ 2.64
TSEN54-201ENST00000333213 ANKARQ7Z5J8 1434 aa31.55■■■□□ 2.64
TSEN54-201ENST00000333213 NLRP13Q86W25 1043 aa31.53■■■□□ 2.64
TSEN54-201ENST00000333213 TMEM94Q12767 1356 aa31.53■■■□□ 2.64
TSEN54-201ENST00000333213 AKAP12Q02952 1782 aa31.53■■■□□ 2.64
TSEN54-201ENST00000333213 C14orf37Q86TY3 774 aa31.53■■■□□ 2.64
TSEN54-201ENST00000333213 ACEP12821 1306 aa31.52■■■□□ 2.64
TSEN54-201ENST00000333213 PPP2R1AP30153 589 aa31.52■■■□□ 2.64
TSEN54-201ENST00000333213 ZNF335Q9H4Z2 1342 aaPredicted RBP31.52■■■□□ 2.64
TSEN54-201ENST00000333213 FYB1O15117 783 aa31.51■■■□□ 2.64
TSEN54-201ENST00000333213 BRD4O60885 1362 aaPredicted RBP31.51■■■□□ 2.64
TSEN54-201ENST00000333213 MON2Q7Z3U7 1717 aa31.51■■■□□ 2.64
TSEN54-201ENST00000333213 ITSN1Q15811 1721 aa31.5■■■□□ 2.63
TSEN54-201ENST00000333213 PMFBP1Q8TBY8 1022 aa31.5■■■□□ 2.63
TSEN54-201ENST00000333213 EDC4Q6P2E9 1401 aaKnown RBP31.49■■■□□ 2.63
TSEN54-201ENST00000333213 NSD2O96028 1365 aa31.48■■■□□ 2.63
TSEN54-201ENST00000333213 GGNBP2Q9H3C7 697 aa31.48■■■□□ 2.63
TSEN54-201ENST00000333213 ZNF692Q9BU19 519 aaPredicted RBP31.47■■■□□ 2.63
TSEN54-201ENST00000333213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.47■■■□□ 2.63
TSEN54-201ENST00000333213 C19orf44Q9H6X5 657 aa31.46■■■□□ 2.63
TSEN54-201ENST00000333213 POLR3AO14802 1390 aaPredicted RBP31.46■■■□□ 2.63
TSEN54-201ENST00000333213 MORC1Q86VD1 984 aa31.45■■■□□ 2.63
TSEN54-201ENST00000333213 NCOA3Q9Y6Q9 1424 aa31.44■■■□□ 2.62
TSEN54-201ENST00000333213 USP6P35125 1406 aa31.43■■■□□ 2.62
TSEN54-201ENST00000333213 NRKQ7Z2Y5 1582 aa31.43■■■□□ 2.62
TSEN54-201ENST00000333213 XIRP1Q702N8 1843 aaKnown RBP31.43■■■□□ 2.62
TSEN54-201ENST00000333213 PNISRQ8TF01 805 aaKnown RBP31.43■■■□□ 2.62
TSEN54-201ENST00000333213 DMRT2Q9Y5R5 561 aa31.43■■■□□ 2.62
TSEN54-201ENST00000333213 FAM9BQ8IZU0 186 aa31.42■■■□□ 2.62
TSEN54-201ENST00000333213 KIF20BQ96Q89 1820 aa31.42■■■□□ 2.62
TSEN54-201ENST00000333213 TNNT2P45379 298 aaPredicted RBP31.41■■■□□ 2.62
TSEN54-201ENST00000333213 LRRC7Q96NW7 1537 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms