RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
PRKCD-201ENST00000330452 ABCA6Q8N139 1617 aa22.02■■□□□ 1.12
PRKCD-201ENST00000330452 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.12
PRKCD-201ENST00000330452 SYNMO15061 1565 aa22.01■■□□□ 1.11
PRKCD-201ENST00000330452 NPATQ14207 1427 aa22.01■■□□□ 1.11
PRKCD-201ENST00000330452 SKAP1Q86WV1 359 aa22.01■■□□□ 1.11
PRKCD-201ENST00000330452 VWDEQ8N2E2 1590 aa22■■□□□ 1.11
PRKCD-201ENST00000330452 L1TD1Q5T7N2 865 aaKnown RBP22■■□□□ 1.11
PRKCD-201ENST00000330452 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
PRKCD-201ENST00000330452 ASXL1Q8IXJ9 1541 aa22■■□□□ 1.11
PRKCD-201ENST00000330452 MS4A1P11836 297 aa21.99■■□□□ 1.11
PRKCD-201ENST00000330452 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
PRKCD-201ENST00000330452 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
PRKCD-201ENST00000330452 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
PRKCD-201ENST00000330452 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
PRKCD-201ENST00000330452 TRAK1Q9UPV9 953 aa21.97■■□□□ 1.11
PRKCD-201ENST00000330452 MYOM1P52179 1685 aa21.97■■□□□ 1.11
PRKCD-201ENST00000330452 TPM2P07951 284 aa21.96■■□□□ 1.11
PRKCD-201ENST00000330452 MLH3Q9UHC1 1453 aa21.96■■□□□ 1.11
PRKCD-201ENST00000330452 POGKQ9P215 609 aa21.96■■□□□ 1.11
PRKCD-201ENST00000330452 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
PRKCD-201ENST00000330452 NOS1P29475 1434 aa21.95■■□□□ 1.11
PRKCD-201ENST00000330452 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
PRKCD-201ENST00000330452 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
PRKCD-201ENST00000330452 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
PRKCD-201ENST00000330452 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
PRKCD-201ENST00000330452 IPO4Q8TEX9 1081 aaKnown RBP21.94■■□□□ 1.1
PRKCD-201ENST00000330452 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
PRKCD-201ENST00000330452 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
PRKCD-201ENST00000330452 ERVK-7P63135 1459 aa21.93■■□□□ 1.1
PRKCD-201ENST00000330452 MAP3K4Q9Y6R4 1608 aa21.92■■□□□ 1.1
PRKCD-201ENST00000330452 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
PRKCD-201ENST00000330452 NPC1L1Q9UHC9 1359 aa21.92■■□□□ 1.1
PRKCD-201ENST00000330452 IDI1Q13907 227 aa21.91■■□□□ 1.1
PRKCD-201ENST00000330452 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
PRKCD-201ENST00000330452 NEO1Q92859 1461 aa21.9■■□□□ 1.1
PRKCD-201ENST00000330452 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
PRKCD-201ENST00000330452 APAF1O14727 1248 aa21.9■■□□□ 1.1
PRKCD-201ENST00000330452 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
PRKCD-201ENST00000330452 MYOM2P54296 1465 aa21.9■■□□□ 1.1
PRKCD-201ENST00000330452 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
PRKCD-201ENST00000330452 SLFN5Q08AF3 891 aa21.89■■□□□ 1.09
PRKCD-201ENST00000330452 DIP2CQ9Y2E4 1556 aa21.89■■□□□ 1.09
PRKCD-201ENST00000330452 STK26Q9P289 416 aa21.88■■□□□ 1.09
PRKCD-201ENST00000330452 CFAP74Q9C0B2 1584 aa21.87■■□□□ 1.09
PRKCD-201ENST00000330452 ABCC3O15438 1527 aa21.87■■□□□ 1.09
PRKCD-201ENST00000330452 NEURL4Q96JN8 1562 aa21.86■■□□□ 1.09
PRKCD-201ENST00000330452 KIF1BO60333 1816 aa21.86■■□□□ 1.09
PRKCD-201ENST00000330452 SMAP1Q8IYB5 467 aaPredicted RBP21.85■■□□□ 1.09
PRKCD-201ENST00000330452 ZHX1Q9UKY1 873 aaPredicted RBP21.85■■□□□ 1.09
PRKCD-201ENST00000330452 XRCC6P12956 609 aaKnown RBP eCLIP21.85■■□□□ 1.09
PRKCD-201ENST00000330452 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
PRKCD-201ENST00000330452 SIGLEC1Q9BZZ2 1709 aa21.84■■□□□ 1.09
PRKCD-201ENST00000330452 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.08
PRKCD-201ENST00000330452 TRMT2AQ8IZ69 625 aaKnown RBP21.83■■□□□ 1.08
PRKCD-201ENST00000330452 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.08
PRKCD-201ENST00000330452 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
PRKCD-201ENST00000330452 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
PRKCD-201ENST00000330452 IFT172Q9UG01 1749 aa21.8■■□□□ 1.08
PRKCD-201ENST00000330452 TNNT2P45379 298 aaPredicted RBP21.8■■□□□ 1.08
PRKCD-201ENST00000330452 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.8■■□□□ 1.08
PRKCD-201ENST00000330452 BCAR3O75815 825 aa21.79■■□□□ 1.08
PRKCD-201ENST00000330452 SLC12A5Q9H2X9 1139 aa21.79■■□□□ 1.08
PRKCD-201ENST00000330452 PANK2Q9BZ23 570 aa21.79■■□□□ 1.08
PRKCD-201ENST00000330452 LMTK2Q8IWU2 1503 aa21.77■■□□□ 1.08
PRKCD-201ENST00000330452 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.08
PRKCD-201ENST00000330452 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
PRKCD-201ENST00000330452 CENPQQ7L2Z9 268 aaPredicted RBP21.77■■□□□ 1.08
PRKCD-201ENST00000330452 ESPNB1AK53 854 aa21.76■■□□□ 1.07
PRKCD-201ENST00000330452 SBNO2Q9Y2G9 1366 aa21.76■■□□□ 1.07
PRKCD-201ENST00000330452 C14orf93Q9H972 538 aaKnown RBP21.76■■□□□ 1.07
PRKCD-201ENST00000330452 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
PRKCD-201ENST00000330452 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
PRKCD-201ENST00000330452 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
PRKCD-201ENST00000330452 ARXQ96QS3 562 aa21.75■■□□□ 1.07
PRKCD-201ENST00000330452 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
PRKCD-201ENST00000330452 E9PSI1 815 aa21.75■■□□□ 1.07
PRKCD-201ENST00000330452 MORC1Q86VD1 984 aa21.74■■□□□ 1.07
PRKCD-201ENST00000330452 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
PRKCD-201ENST00000330452 FSD2A1L4K1 749 aa21.73■■□□□ 1.07
PRKCD-201ENST00000330452 NCLP19338 710 aaKnown RBP21.73■■□□□ 1.07
PRKCD-201ENST00000330452 GOLGA6L3A6NEY3 463 aa21.72■■□□□ 1.07
PRKCD-201ENST00000330452 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
PRKCD-201ENST00000330452 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
PRKCD-201ENST00000330452 MAP7D2Q96T17 732 aa21.72■■□□□ 1.07
PRKCD-201ENST00000330452 TMEM51Q9NW97 253 aa21.71■■□□□ 1.07
PRKCD-201ENST00000330452 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
PRKCD-201ENST00000330452 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
PRKCD-201ENST00000330452 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
PRKCD-201ENST00000330452 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.06
PRKCD-201ENST00000330452 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
PRKCD-201ENST00000330452 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
PRKCD-201ENST00000330452 UTP14CQ5TAP6 766 aaKnown RBP21.69■■□□□ 1.06
PRKCD-201ENST00000330452 RIPK4P57078 832 aa21.69■■□□□ 1.06
PRKCD-201ENST00000330452 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
PRKCD-201ENST00000330452 GLI2P10070 1586 aa21.68■■□□□ 1.06
PRKCD-201ENST00000330452 ZNF830Q96NB3 372 aaPredicted RBP21.67■■□□□ 1.06
PRKCD-201ENST00000330452 PPLO60437 1756 aa21.67■■□□□ 1.06
PRKCD-201ENST00000330452 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
PRKCD-201ENST00000330452 QRICH2Q9H0J4 1663 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms