RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ADAMTS2O95450 1211 aa34.55■■■■□ 3.12
TMEM54-201ENST00000329151 ESCO1Q5FWF5 840 aa34.55■■■■□ 3.12
TMEM54-201ENST00000329151 NGLY1Q96IV0 654 aa34.55■■■■□ 3.12
TMEM54-201ENST00000329151 SOS2Q07890 1332 aaPredicted RBP34.53■■■■□ 3.12
TMEM54-201ENST00000329151 CDK12Q9NYV4 1490 aaPredicted RBP34.51■■■■□ 3.11
TMEM54-201ENST00000329151 NPHP3Q7Z494 1330 aa34.51■■■■□ 3.11
TMEM54-201ENST00000329151 QTRT2Q9H974 415 aaKnown RBP34.5■■■■□ 3.11
TMEM54-201ENST00000329151 LRPPRCP42704 1394 aaKnown RBP34.49■■■■□ 3.11
TMEM54-201ENST00000329151 KNDC1Q76NI1 1749 aa34.47■■■■□ 3.11
TMEM54-201ENST00000329151 RBM6P78332 1123 aaKnown RBP34.47■■■■□ 3.11
TMEM54-201ENST00000329151 TMEM132EQ6IEE7 984 aa34.47■■■■□ 3.11
TMEM54-201ENST00000329151 WAPLQ7Z5K2 1190 aa34.47■■■■□ 3.11
TMEM54-201ENST00000329151 TECPR2O15040 1411 aa34.47■■■■□ 3.11
TMEM54-201ENST00000329151 PIK3C2GO75747 1445 aa34.46■■■■□ 3.11
TMEM54-201ENST00000329151 NUTM2FA1L443 756 aa34.44■■■■□ 3.1
TMEM54-201ENST00000329151 UPF1Q92900 1129 aaKnown RBP eCLIP34.44■■■■□ 3.1
TMEM54-201ENST00000329151 ABCC11Q96J66 1382 aa34.44■■■■□ 3.1
TMEM54-201ENST00000329151 YTHDC2Q9H6S0 1430 aaKnown RBP34.41■■■■□ 3.1
TMEM54-201ENST00000329151 FOXO3O43524 673 aa34.4■■■■□ 3.1
TMEM54-201ENST00000329151 USP21Q9UK80 565 aa34.39■■■■□ 3.1
TMEM54-201ENST00000329151 COL22A1Q8NFW1 1626 aaPredicted RBP34.38■■■■□ 3.09
TMEM54-201ENST00000329151 XPCQ01831 940 aaPredicted RBP34.37■■■■□ 3.09
TMEM54-201ENST00000329151 DHX57Q6P158 1386 aaKnown RBP34.36■■■■□ 3.09
TMEM54-201ENST00000329151 TRPC5Q9UL62 973 aaPredicted RBP34.35■■■■□ 3.09
TMEM54-201ENST00000329151 FMN2Q9NZ56 1722 aa34.35■■■■□ 3.09
TMEM54-201ENST00000329151 PLEKHH1Q9ULM0 1364 aa34.35■■■■□ 3.09
TMEM54-201ENST00000329151 RGS12O14924 1447 aa34.34■■■■□ 3.09
TMEM54-201ENST00000329151 PXDNQ92626 1479 aa34.33■■■■□ 3.09
TMEM54-201ENST00000329151 C14orf93Q9H972 538 aaKnown RBP34.33■■■■□ 3.09
TMEM54-201ENST00000329151 KIF1AQ12756 1690 aa34.33■■■■□ 3.09
TMEM54-201ENST00000329151 RAB3GAP2Q9H2M9 1393 aa34.33■■■■□ 3.09
TMEM54-201ENST00000329151 MYOM2P54296 1465 aa34.32■■■■□ 3.08
TMEM54-201ENST00000329151 CFAP70Q5T0N1 1121 aa34.29■■■■□ 3.08
TMEM54-201ENST00000329151 SIRT1Q96EB6 747 aa34.29■■■■□ 3.08
TMEM54-201ENST00000329151 MARF1Q9Y4F3 1742 aaKnown RBP34.29■■■■□ 3.08
TMEM54-201ENST00000329151 FNBP4Q8N3X1 1017 aaPredicted RBP34.27■■■■□ 3.08
TMEM54-201ENST00000329151 POGKQ9P215 609 aa34.26■■■■□ 3.08
TMEM54-201ENST00000329151 SAFB2Q14151 953 aaKnown RBP eCLIP34.25■■■■□ 3.07
TMEM54-201ENST00000329151 NRXN1Q9ULB1 1477 aa34.25■■■■□ 3.07
TMEM54-201ENST00000329151 HAP1P54257 671 aaPredicted RBP34.24■■■■□ 3.07
TMEM54-201ENST00000329151 RGPD8O14715 1765 aaPredicted RBP34.22■■■■□ 3.07
TMEM54-201ENST00000329151 PSME1Q06323 249 aa34.22■■■■□ 3.07
TMEM54-201ENST00000329151 KRT28Q7Z3Y7 464 aa34.22■■■■□ 3.07
TMEM54-201ENST00000329151 PRAM1Q96QH2 718 aa34.22■■■■□ 3.07
TMEM54-201ENST00000329151 ATAD2Q6PL18 1390 aa34.21■■■■□ 3.07
TMEM54-201ENST00000329151 PHF8Q9UPP1 1060 aa34.2■■■■□ 3.07
TMEM54-201ENST00000329151 ATRNO75882 1429 aa34.19■■■■□ 3.06
TMEM54-201ENST00000329151 SPATA31A3Q5VYP0 1347 aa34.18■■■■□ 3.06
TMEM54-201ENST00000329151 KDM2AQ9Y2K7 1162 aa34.16■■■■□ 3.06
TMEM54-201ENST00000329151 LMOD2Q6P5Q4 547 aa34.15■■■■□ 3.06
TMEM54-201ENST00000329151 DLC1Q96QB1 1528 aa34.14■■■■□ 3.06
TMEM54-201ENST00000329151 DCAF11Q8TEB1 546 aa34.13■■■■□ 3.05
TMEM54-201ENST00000329151 TNS3Q68CZ2 1445 aa34.12■■■■□ 3.05
TMEM54-201ENST00000329151 PLEKHG5O94827 1062 aa34.11■■■■□ 3.05
TMEM54-201ENST00000329151 BCL9LQ86UU0 1499 aa34.1■■■■□ 3.05
TMEM54-201ENST00000329151 TRAK1Q9UPV9 953 aa34.1■■■■□ 3.05
TMEM54-201ENST00000329151 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.09■■■■□ 3.05
TMEM54-201ENST00000329151 GJD4Q96KN9 370 aaPredicted RBP34.08■■■■□ 3.05
TMEM54-201ENST00000329151 STAC3Q96MF2 364 aa34.08■■■■□ 3.05
TMEM54-201ENST00000329151 EIF3AQ14152 1382 aaKnown RBP34.08■■■■□ 3.05
TMEM54-201ENST00000329151 USP32Q8NFA0 1604 aa34.08■■■■□ 3.05
TMEM54-201ENST00000329151 ANKARQ7Z5J8 1434 aa34.07■■■■□ 3.04
TMEM54-201ENST00000329151 UNC5CLQ8IV45 518 aa34.07■■■■□ 3.04
TMEM54-201ENST00000329151 ARHGEF10O15013 1369 aa34.06■■■■□ 3.04
TMEM54-201ENST00000329151 PMFBP1Q8TBY8 1022 aa34.05■■■■□ 3.04
TMEM54-201ENST00000329151 ADGRB2O60241 1585 aa34.04■■■■□ 3.04
TMEM54-201ENST00000329151 SBNO1A3KN83 1393 aa34.04■■■■□ 3.04
TMEM54-201ENST00000329151 HIRIP3Q9BW71 556 aaPredicted RBP34.04■■■■□ 3.04
TMEM54-201ENST00000329151 ADGRB1O14514 1584 aa34.03■■■■□ 3.04
TMEM54-201ENST00000329151 MINK1Q8N4C8 1332 aaPredicted RBP34.03■■■■□ 3.04
TMEM54-201ENST00000329151 HRCP23327 699 aa34.02■■■■□ 3.04
TMEM54-201ENST00000329151 GPRASP1Q5JY77 1395 aa34■■■■□ 3.03
TMEM54-201ENST00000329151 CABLES1Q8TDN4 633 aa34■■■■□ 3.03
TMEM54-201ENST00000329151 SLIT2O94813 1529 aa33.99■■■■□ 3.03
TMEM54-201ENST00000329151 CCDC9Q9Y3X0 531 aaKnown RBP33.99■■■■□ 3.03
TMEM54-201ENST00000329151 RALGAPBQ86X10 1494 aa33.96■■■■□ 3.03
TMEM54-201ENST00000329151 PLCH1Q4KWH8 1693 aa33.94■■■■□ 3.02
TMEM54-201ENST00000329151 ABCA3Q99758 1704 aa33.94■■■■□ 3.02
TMEM54-201ENST00000329151 NWD2Q9ULI1 1742 aa33.94■■■■□ 3.02
TMEM54-201ENST00000329151 CCDC125Q86Z20 511 aa33.94■■■■□ 3.02
TMEM54-201ENST00000329151 TULP4Q9NRJ4 1543 aa33.94■■■■□ 3.02
TMEM54-201ENST00000329151 WASLO00401 505 aaPredicted RBP33.93■■■■□ 3.02
TMEM54-201ENST00000329151 NGDNQ8NEJ9 315 aaKnown RBP33.93■■■■□ 3.02
TMEM54-201ENST00000329151 GLI3P10071 1580 aa33.9■■■■□ 3.02
TMEM54-201ENST00000329151 VPS72Q15906 364 aa33.89■■■■□ 3.02
TMEM54-201ENST00000329151 ITSN1Q15811 1721 aa33.88■■■■□ 3.01
TMEM54-201ENST00000329151 EP400Q96L91 3159 aa33.88■■■■□ 3.01
TMEM54-201ENST00000329151 PAK3O75914 559 aaPredicted RBP33.88■■■■□ 3.01
TMEM54-201ENST00000329151 ARHGEF28Q8N1W1 1705 aaKnown RBP33.87■■■■□ 3.01
TMEM54-201ENST00000329151 A0A0G2JS52 829 aa33.87■■■■□ 3.01
TMEM54-201ENST00000329151 MYT1Q01538 1121 aa33.87■■■■□ 3.01
TMEM54-201ENST00000329151 ZRANB1Q9UGI0 708 aa33.86■■■■□ 3.01
TMEM54-201ENST00000329151 TRPM3Q9HCF6 1732 aaPredicted RBP33.86■■■■□ 3.01
TMEM54-201ENST00000329151 BRWD3Q6RI45 1802 aa33.84■■■■□ 3.01
TMEM54-201ENST00000329151 SF3B2Q13435 895 aaKnown RBP33.84■■■■□ 3.01
TMEM54-201ENST00000329151 PRR36Q9H6K5 1346 aa33.83■■■■□ 3.01
TMEM54-201ENST00000329151 SEPT12Q8IYM1 358 aa33.83■■■■□ 3.01
TMEM54-201ENST00000329151 ALS2Q96Q42 1657 aa33.82■■■■□ 3
TMEM54-201ENST00000329151 FAM83GA6ND36 823 aa33.8■■■■□ 3
TMEM54-201ENST00000329151 COL14A1Q05707 1796 aaKnown RBP33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms