RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
SF3B2-201ENST00000322535 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
SF3B2-201ENST00000322535 PTPRTO14522 1441 aa13.24□□□□□ -0.29
SF3B2-201ENST00000322535 ABCC3O15438 1527 aa13.24□□□□□ -0.29
SF3B2-201ENST00000322535 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
SF3B2-201ENST00000322535 HOMEZQ8IX15 550 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
SF3B2-201ENST00000322535 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 TPM2P07951 284 aa13.23□□□□□ -0.29
SF3B2-201ENST00000322535 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
SF3B2-201ENST00000322535 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
SF3B2-201ENST00000322535 TRPM2O94759 1503 aa13.22□□□□□ -0.29
SF3B2-201ENST00000322535 MS4A1P11836 297 aa13.22□□□□□ -0.29
SF3B2-201ENST00000322535 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.29
SF3B2-201ENST00000322535 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-201ENST00000322535 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
SF3B2-201ENST00000322535 NOS1P29475 1434 aa13.21□□□□□ -0.29
SF3B2-201ENST00000322535 STK26Q9P289 416 aa13.21□□□□□ -0.3
SF3B2-201ENST00000322535 UHRF1BP1Q6BDS2 1440 aa13.21□□□□□ -0.3
SF3B2-201ENST00000322535 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-201ENST00000322535 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
SF3B2-201ENST00000322535 RALGAPBQ86X10 1494 aa13.2□□□□□ -0.3
SF3B2-201ENST00000322535 RNF17Q9BXT8 1623 aaKnown RBP13.19□□□□□ -0.3
SF3B2-201ENST00000322535 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
SF3B2-201ENST00000322535 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-201ENST00000322535 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
SF3B2-201ENST00000322535 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SF3B2-201ENST00000322535 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
SF3B2-201ENST00000322535 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
SF3B2-201ENST00000322535 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
SF3B2-201ENST00000322535 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
SF3B2-201ENST00000322535 PLIN1O60240 522 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
SF3B2-201ENST00000322535 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 DMTNQ08495 405 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
SF3B2-201ENST00000322535 E9PSI1 815 aa13.15□□□□□ -0.3
SF3B2-201ENST00000322535 RIPK4P57078 832 aa13.15□□□□□ -0.3
SF3B2-201ENST00000322535 TESK2Q96S53 571 aa13.15□□□□□ -0.3
SF3B2-201ENST00000322535 FAM13BQ9NYF5 915 aa13.14□□□□□ -0.31
SF3B2-201ENST00000322535 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
SF3B2-201ENST00000322535 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
SF3B2-201ENST00000322535 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
SF3B2-201ENST00000322535 SYNMO15061 1565 aa13.14□□□□□ -0.31
SF3B2-201ENST00000322535 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
SF3B2-201ENST00000322535 LMTK2Q8IWU2 1503 aa13.13□□□□□ -0.31
SF3B2-201ENST00000322535 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
SF3B2-201ENST00000322535 KIF1BO60333 1816 aa13.12□□□□□ -0.31
SF3B2-201ENST00000322535 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
SF3B2-201ENST00000322535 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
SF3B2-201ENST00000322535 BCCIPQ9P287 314 aaKnown RBP eCLIP13.12□□□□□ -0.31
SF3B2-201ENST00000322535 ESPNB1AK53 854 aa13.11□□□□□ -0.31
SF3B2-201ENST00000322535 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
SF3B2-201ENST00000322535 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
SF3B2-201ENST00000322535 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
SF3B2-201ENST00000322535 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
SF3B2-201ENST00000322535 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
SF3B2-201ENST00000322535 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-201ENST00000322535 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
SF3B2-201ENST00000322535 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
SF3B2-201ENST00000322535 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-201ENST00000322535 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
SF3B2-201ENST00000322535 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-201ENST00000322535 PANK3Q9H999 370 aa13.09□□□□□ -0.31
SF3B2-201ENST00000322535 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
SF3B2-201ENST00000322535 TMF1P82094 1093 aa13.09□□□□□ -0.31
SF3B2-201ENST00000322535 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
SF3B2-201ENST00000322535 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-201ENST00000322535 MYH16Q9H6N6 1097 aa13.07□□□□□ -0.32
SF3B2-201ENST00000322535 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
SF3B2-201ENST00000322535 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
SF3B2-201ENST00000322535 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
SF3B2-201ENST00000322535 ADGRB3O60242 1522 aa13.07□□□□□ -0.32
SF3B2-201ENST00000322535 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
SF3B2-201ENST00000322535 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
SF3B2-201ENST00000322535 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
SF3B2-201ENST00000322535 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
SF3B2-201ENST00000322535 FAM161AQ3B820 660 aa13.05□□□□□ -0.32
SF3B2-201ENST00000322535 MAP7D2Q96T17 732 aa13.05□□□□□ -0.32
SF3B2-201ENST00000322535 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
SF3B2-201ENST00000322535 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-201ENST00000322535 DNTTIP2Q5QJE6 756 aaKnown RBP13.04□□□□□ -0.32
SF3B2-201ENST00000322535 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
SF3B2-201ENST00000322535 PIK3C2BO00750 1634 aa13.04□□□□□ -0.32
SF3B2-201ENST00000322535 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
SF3B2-201ENST00000322535 AGLP35573 1532 aa13.03□□□□□ -0.32
SF3B2-201ENST00000322535 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
SF3B2-201ENST00000322535 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
SF3B2-201ENST00000322535 C8orf34Q49A92 452 aa13.02□□□□□ -0.32
SF3B2-201ENST00000322535 CABP2Q9NPB3 220 aa13.02□□□□□ -0.32
SF3B2-201ENST00000322535 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
SF3B2-201ENST00000322535 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-201ENST00000322535 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms