RNA–Protein interactions for RNA: ENST00000320476.7

SCRIB-201, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,143 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-201ENST00000320476 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
SCRIB-201ENST00000320476 TRAK2O60296 914 aa22.23■■□□□ 1.15
SCRIB-201ENST00000320476 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
SCRIB-201ENST00000320476 CLSTN1O94985 981 aa22.23■■□□□ 1.15
SCRIB-201ENST00000320476 PDZRN3Q9UPQ7 1066 aa22.23■■□□□ 1.15
SCRIB-201ENST00000320476 GGNBP2Q9H3C7 697 aa22.22■■□□□ 1.15
SCRIB-201ENST00000320476 EIF2S2P20042 333 aaKnown RBP22.22■■□□□ 1.15
SCRIB-201ENST00000320476 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
SCRIB-201ENST00000320476 TPM2P07951 284 aa22.21■■□□□ 1.15
SCRIB-201ENST00000320476 NASPP49321 788 aaPredicted RBP22.21■■□□□ 1.15
SCRIB-201ENST00000320476 ERC2O15083 957 aa22.2■■□□□ 1.14
SCRIB-201ENST00000320476 RRP9O43818 475 aaKnown RBP22.2■■□□□ 1.14
SCRIB-201ENST00000320476 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
SCRIB-201ENST00000320476 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
SCRIB-201ENST00000320476 TSPYL4Q9UJ04 414 aa22.2■■□□□ 1.14
SCRIB-201ENST00000320476 CREBRFQ8IUR6 639 aa22.2■■□□□ 1.14
SCRIB-201ENST00000320476 BICD2Q8TD16 824 aa22.19■■□□□ 1.14
SCRIB-201ENST00000320476 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.148e-7■■■■□ 19.6
SCRIB-201ENST00000320476 FAM13BQ9NYF5 915 aa22.19■■□□□ 1.14
SCRIB-201ENST00000320476 HMOX1P09601 288 aa22.19■■□□□ 1.14
SCRIB-201ENST00000320476 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
SCRIB-201ENST00000320476 TPM1P09493 284 aa22.18■■□□□ 1.14
SCRIB-201ENST00000320476 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.142e-7■□□□□ 10.7
SCRIB-201ENST00000320476 TPD52L1Q16890 204 aaPredicted RBP22.18■■□□□ 1.14
SCRIB-201ENST00000320476 VPS37CA5D8V6 355 aaPredicted RBP22.17■■□□□ 1.14
SCRIB-201ENST00000320476 SYNE3Q6ZMZ3 975 aa22.17■■□□□ 1.14
SCRIB-201ENST00000320476 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
SCRIB-201ENST00000320476 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
SCRIB-201ENST00000320476 TSR1Q2NL82 804 aaKnown RBP22.17■■□□□ 1.14
SCRIB-201ENST00000320476 CCDC39Q9UFE4 941 aa22.17■■□□□ 1.14
SCRIB-201ENST00000320476 AKAP17AQ02040 695 aaKnown RBP22.16■■□□□ 1.14
SCRIB-201ENST00000320476 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
SCRIB-201ENST00000320476 CABP2Q9NPB3 220 aa22.16■■□□□ 1.14
SCRIB-201ENST00000320476 C9orf84Q5VXU9 1444 aa22.16■■□□□ 1.14
SCRIB-201ENST00000320476 MBD3O95983 291 aa22.16■■□□□ 1.14
SCRIB-201ENST00000320476 GPS2Q13227 327 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 RABEP1Q15276 862 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 EXOSC9Q06265 439 aaKnown RBP22.15■■□□□ 1.14
SCRIB-201ENST00000320476 TTC5Q8N0Z6 440 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 CCDC184Q52MB2 194 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 ARHGAP5Q13017 1502 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 MCM2P49736 904 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 SASS6Q6UVJ0 657 aa22.15■■□□□ 1.14
SCRIB-201ENST00000320476 ZNF592Q92610 1267 aa22.14■■□□□ 1.14
SCRIB-201ENST00000320476 ZNF771Q7L3S4 317 aaPredicted RBP22.14■■□□□ 1.14
SCRIB-201ENST00000320476 NECTIN2Q92692 538 aa22.14■■□□□ 1.14
SCRIB-201ENST00000320476 TRIM29Q14134 588 aa22.14■■□□□ 1.13
SCRIB-201ENST00000320476 CPLX1O14810 134 aa22.14■■□□□ 1.13
SCRIB-201ENST00000320476 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
SCRIB-201ENST00000320476 BCAR3O75815 825 aa22.13■■□□□ 1.13
SCRIB-201ENST00000320476 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.12■■□□□ 1.13
SCRIB-201ENST00000320476 TMEM132EQ6IEE7 984 aa22.12■■□□□ 1.13
SCRIB-201ENST00000320476 DAPK1P53355 1430 aa22.12■■□□□ 1.13
SCRIB-201ENST00000320476 GNAI3P08754 354 aa22.12■■□□□ 1.13
SCRIB-201ENST00000320476 ERBINQ96RT1 1412 aa22.11■■□□□ 1.13
SCRIB-201ENST00000320476 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
SCRIB-201ENST00000320476 NAIPQ13075 1403 aa22.11■■□□□ 1.13
SCRIB-201ENST00000320476 HECW1Q76N89 1606 aa22.11■■□□□ 1.13
SCRIB-201ENST00000320476 UBTFL1P0CB47 393 aaPredicted RBP22.11■■□□□ 1.13
SCRIB-201ENST00000320476 HOOK1Q9UJC3 728 aaKnown RBP22.1■■□□□ 1.13
SCRIB-201ENST00000320476 LETM1O95202 739 aaPredicted RBP22.1■■□□□ 1.13
SCRIB-201ENST00000320476 CCAR2Q8N163 923 aaKnown RBP22.1■■□□□ 1.13
SCRIB-201ENST00000320476 CCDC73Q6ZRK6 1079 aa22.1■■□□□ 1.13
SCRIB-201ENST00000320476 PES1O00541 588 aaKnown RBP22.1■■□□□ 1.13
SCRIB-201ENST00000320476 TMX4Q9H1E5 349 aaPredicted RBP22.09■■□□□ 1.13
SCRIB-201ENST00000320476 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
SCRIB-201ENST00000320476 PLEKHH2Q8IVE3 1493 aa22.08■■□□□ 1.13
SCRIB-201ENST00000320476 CCDC173Q0VFZ6 552 aa22.08■■□□□ 1.13
SCRIB-201ENST00000320476 TRDNQ13061 729 aa22.08■■□□□ 1.13
SCRIB-201ENST00000320476 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
SCRIB-201ENST00000320476 CAVIN1Q6NZI2 390 aaKnown RBP22.07■■□□□ 1.12
SCRIB-201ENST00000320476 CCDC70Q6NSX1 233 aa22.07■■□□□ 1.12
SCRIB-201ENST00000320476 CNTROBQ8N137 903 aa22.07■■□□□ 1.12
SCRIB-201ENST00000320476 PSMA5P28066 241 aa22.06■■□□□ 1.12
SCRIB-201ENST00000320476 GTF2E1P29083 439 aaPredicted RBP22.06■■□□□ 1.12
SCRIB-201ENST00000320476 HOMER1Q86YM7 354 aa22.06■■□□□ 1.12
SCRIB-201ENST00000320476 NOB1Q9ULX3 412 aaKnown RBP22.06■■□□□ 1.12
SCRIB-201ENST00000320476 TWISTNBQ3B726 338 aaPredicted RBP22.06■■□□□ 1.12
SCRIB-201ENST00000320476 MARCH6O60337 910 aa22.06■■□□□ 1.12
SCRIB-201ENST00000320476 MVPQ14764 893 aaKnown RBP22.06■■□□□ 1.12
SCRIB-201ENST00000320476 ANKRD20A12PQ8NF67 263 aa22.06■■□□□ 1.12
SCRIB-201ENST00000320476 CWC22Q9HCG8 908 aaKnown RBP22.05■■□□□ 1.12
SCRIB-201ENST00000320476 R3HCC1Q9Y3T6 440 aaKnown RBP22.05■■□□□ 1.12
SCRIB-201ENST00000320476 IFT57Q9NWB7 429 aa22.05■■□□□ 1.12
SCRIB-201ENST00000320476 NEK4P51957 841 aa22.05■■□□□ 1.12
SCRIB-201ENST00000320476 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
SCRIB-201ENST00000320476 ATF7IPQ6VMQ6 1270 aa22.04■■□□□ 1.12
SCRIB-201ENST00000320476 IPO7O95373 1038 aaKnown RBP22.03■■□□□ 1.12
SCRIB-201ENST00000320476 TEX35Q5T0J7 233 aa22.03■■□□□ 1.12
SCRIB-201ENST00000320476 KIAA0586Q9BVV6 1533 aa22.03■■□□□ 1.12
SCRIB-201ENST00000320476 MSH5O43196 834 aa22.03■■□□□ 1.12
SCRIB-201ENST00000320476 RNF214Q8ND24 703 aa22.03■■□□□ 1.12
SCRIB-201ENST00000320476 CLASRPQ8N2M8 674 aaKnown RBP22.02■■□□□ 1.12
SCRIB-201ENST00000320476 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
SCRIB-201ENST00000320476 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
SCRIB-201ENST00000320476 CIZ1Q9ULV3 898 aaPredicted RBP22.02■■□□□ 1.12
SCRIB-201ENST00000320476 TSPY26PQ9H489 355 aa22.02■■□□□ 1.12
SCRIB-201ENST00000320476 PRPF40AO75400 957 aaKnown RBP22.01■■□□□ 1.11
SCRIB-201ENST00000320476 NAT10Q9H0A0 1025 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms