RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 GRPEL1Q9HAV7 217 aa17.89■□□□□ 0.46
PABPC1-201ENST00000318607 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.46
PABPC1-201ENST00000318607 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.45
PABPC1-201ENST00000318607 FAM13BQ9NYF5 915 aa17.89■□□□□ 0.45
PABPC1-201ENST00000318607 FBLN1P23142 703 aa17.88■□□□□ 0.45
PABPC1-201ENST00000318607 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
PABPC1-201ENST00000318607 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
PABPC1-201ENST00000318607 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
PABPC1-201ENST00000318607 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-201ENST00000318607 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
PABPC1-201ENST00000318607 ESPNB1AK53 854 aa17.87■□□□□ 0.45
PABPC1-201ENST00000318607 ANP32BQ92688 251 aaKnown RBP17.87■□□□□ 0.45
PABPC1-201ENST00000318607 DNMT1P26358 1616 aaKnown RBP17.86■□□□□ 0.45
PABPC1-201ENST00000318607 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
PABPC1-201ENST00000318607 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
PABPC1-201ENST00000318607 KIF3BO15066 747 aa17.86■□□□□ 0.45
PABPC1-201ENST00000318607 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
PABPC1-201ENST00000318607 PTPRGP23470 1445 aa17.86■□□□□ 0.45
PABPC1-201ENST00000318607 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
PABPC1-201ENST00000318607 PDE3AQ14432 1141 aa17.85■□□□□ 0.45
PABPC1-201ENST00000318607 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
PABPC1-201ENST00000318607 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
PABPC1-201ENST00000318607 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
PABPC1-201ENST00000318607 DDX49Q9Y6V7 483 aaKnown RBP17.85■□□□□ 0.45
PABPC1-201ENST00000318607 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
PABPC1-201ENST00000318607 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
PABPC1-201ENST00000318607 NKTRP30414 1462 aaKnown RBP17.84■□□□□ 0.45
PABPC1-201ENST00000318607 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
PABPC1-201ENST00000318607 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.45
PABPC1-201ENST00000318607 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
PABPC1-201ENST00000318607 MBD5Q9P267 1494 aa17.83■□□□□ 0.44
PABPC1-201ENST00000318607 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
PABPC1-201ENST00000318607 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
PABPC1-201ENST00000318607 GGNBP2Q9H3C7 697 aa17.82■□□□□ 0.44
PABPC1-201ENST00000318607 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
PABPC1-201ENST00000318607 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
PABPC1-201ENST00000318607 MRE11P49959 708 aa17.81■□□□□ 0.44
PABPC1-201ENST00000318607 RNF214Q8ND24 703 aa17.81■□□□□ 0.44
PABPC1-201ENST00000318607 ZNF521Q96K83 1311 aa17.81■□□□□ 0.44
PABPC1-201ENST00000318607 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
PABPC1-201ENST00000318607 KIF14Q15058 1648 aa17.81■□□□□ 0.44
PABPC1-201ENST00000318607 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
PABPC1-201ENST00000318607 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
PABPC1-201ENST00000318607 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
PABPC1-201ENST00000318607 SSFA2P28290 1259 aa17.8■□□□□ 0.44
PABPC1-201ENST00000318607 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
PABPC1-201ENST00000318607 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
PABPC1-201ENST00000318607 DIP2BQ9P265 1576 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 TMEM57Q8N5G2 664 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
PABPC1-201ENST00000318607 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 ADGRL2O95490 1459 aa17.79■□□□□ 0.44
PABPC1-201ENST00000318607 GGT6Q6P531 493 aa17.78■□□□□ 0.44
PABPC1-201ENST00000318607 RNF17Q9BXT8 1623 aaKnown RBP17.78■□□□□ 0.44
PABPC1-201ENST00000318607 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
PABPC1-201ENST00000318607 UHRF1BP1Q6BDS2 1440 aa17.78■□□□□ 0.44
PABPC1-201ENST00000318607 PLEKHH2Q8IVE3 1493 aa17.78■□□□□ 0.44
PABPC1-201ENST00000318607 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
PABPC1-201ENST00000318607 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
PABPC1-201ENST00000318607 TRIM27P14373 513 aa17.77■□□□□ 0.44
PABPC1-201ENST00000318607 CD2BP2O95400 341 aaKnown RBP17.77■□□□□ 0.44
PABPC1-201ENST00000318607 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.43
PABPC1-201ENST00000318607 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.43
PABPC1-201ENST00000318607 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 DTNBO60941 627 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 VWDEQ8N2E2 1590 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 UNC13BO14795 1591 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 SOX12O15370 315 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 GBP4Q96PP9 640 aa17.76■□□□□ 0.43
PABPC1-201ENST00000318607 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
PABPC1-201ENST00000318607 DNTTIP2Q5QJE6 756 aaKnown RBP17.75■□□□□ 0.43
PABPC1-201ENST00000318607 ATP10BO94823 1461 aa17.75■□□□□ 0.43
PABPC1-201ENST00000318607 A2MP01023 1474 aa17.75■□□□□ 0.43
PABPC1-201ENST00000318607 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-201ENST00000318607 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
PABPC1-201ENST00000318607 HMOX1P09601 288 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 CLCN1P35523 988 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 GOLGA6L22H0YM25 854 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 XPCQ01831 940 aaPredicted RBP17.74■□□□□ 0.43
PABPC1-201ENST00000318607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
PABPC1-201ENST00000318607 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
PABPC1-201ENST00000318607 RIPK4P57078 832 aa17.73■□□□□ 0.43
PABPC1-201ENST00000318607 PTMAP06454 111 aaKnown RBP17.73■□□□□ 0.43
PABPC1-201ENST00000318607 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
PABPC1-201ENST00000318607 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
PABPC1-201ENST00000318607 ZC3H13Q5T200 1668 aaKnown RBP17.71■□□□□ 0.43
PABPC1-201ENST00000318607 EFCAB2Q5VUJ9 269 aa17.7■□□□□ 0.42
PABPC1-201ENST00000318607 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
PABPC1-201ENST00000318607 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
PABPC1-201ENST00000318607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.427e-8■□□□□ 10.3
PABPC1-201ENST00000318607 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
PABPC1-201ENST00000318607 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
PABPC1-201ENST00000318607 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
PABPC1-201ENST00000318607 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
PABPC1-201ENST00000318607 PKP1Q13835 747 aa17.68■□□□□ 0.42
PABPC1-201ENST00000318607 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms