RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
CRAT-201ENST00000318080 IGHDP01880 384 aa20.73■□□□□ 0.91
CRAT-201ENST00000318080 CAMSAP1Q5T5Y3 1602 aa20.73■□□□□ 0.91
CRAT-201ENST00000318080 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
CRAT-201ENST00000318080 FAM43AQ8N2R8 423 aa20.71■□□□□ 0.91
CRAT-201ENST00000318080 SEC24BO95487 1268 aa20.7■□□□□ 0.9
CRAT-201ENST00000318080 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
CRAT-201ENST00000318080 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
CRAT-201ENST00000318080 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
CRAT-201ENST00000318080 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
CRAT-201ENST00000318080 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
CRAT-201ENST00000318080 AGLP35573 1532 aa20.68■□□□□ 0.9
CRAT-201ENST00000318080 NUTM2DQ5VT03 806 aaPredicted RBP20.67■□□□□ 0.9
CRAT-201ENST00000318080 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
CRAT-201ENST00000318080 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
CRAT-201ENST00000318080 USP19O94966 1318 aa20.66■□□□□ 0.9
CRAT-201ENST00000318080 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
CRAT-201ENST00000318080 SYNMO15061 1565 aa20.65■□□□□ 0.9
CRAT-201ENST00000318080 IDI1Q13907 227 aa20.64■□□□□ 0.89
CRAT-201ENST00000318080 MROH2AA6NES4 1674 aa20.63■□□□□ 0.89
CRAT-201ENST00000318080 ZMYND15Q9H091 742 aa20.63■□□□□ 0.89
CRAT-201ENST00000318080 ASXL1Q8IXJ9 1541 aa20.63■□□□□ 0.89
CRAT-201ENST00000318080 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
CRAT-201ENST00000318080 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
CRAT-201ENST00000318080 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
CRAT-201ENST00000318080 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
CRAT-201ENST00000318080 NOS1P29475 1434 aa20.62■□□□□ 0.89
CRAT-201ENST00000318080 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
CRAT-201ENST00000318080 MADDQ8WXG6 1647 aa20.61■□□□□ 0.89
CRAT-201ENST00000318080 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
CRAT-201ENST00000318080 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
CRAT-201ENST00000318080 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
CRAT-201ENST00000318080 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
CRAT-201ENST00000318080 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
CRAT-201ENST00000318080 TNNQ9UQP3 1299 aa20.59■□□□□ 0.89
CRAT-201ENST00000318080 SCAF11Q99590 1463 aaKnown RBP20.59■□□□□ 0.89
CRAT-201ENST00000318080 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
CRAT-201ENST00000318080 PANK2Q9BZ23 570 aa20.59■□□□□ 0.89
CRAT-201ENST00000318080 ARHGAP31Q2M1Z3 1444 aa20.59■□□□□ 0.89
CRAT-201ENST00000318080 ADGRF5Q8IZF2 1346 aa20.59■□□□□ 0.89
CRAT-201ENST00000318080 E9PSI1 815 aa20.58■□□□□ 0.89
CRAT-201ENST00000318080 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
CRAT-201ENST00000318080 CFAP70Q5T0N1 1121 aa20.58■□□□□ 0.89
CRAT-201ENST00000318080 IQGAP1P46940 1657 aa20.58■□□□□ 0.89
CRAT-201ENST00000318080 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.88
CRAT-201ENST00000318080 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
CRAT-201ENST00000318080 NAP1L5Q96NT1 182 aaPredicted RBP20.57■□□□□ 0.88
CRAT-201ENST00000318080 ZMYM3Q14202 1370 aa20.57■□□□□ 0.88
CRAT-201ENST00000318080 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
CRAT-201ENST00000318080 KIF1BO60333 1816 aa20.56■□□□□ 0.88
CRAT-201ENST00000318080 MYOM1P52179 1685 aa20.55■□□□□ 0.88
CRAT-201ENST00000318080 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
CRAT-201ENST00000318080 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
CRAT-201ENST00000318080 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
CRAT-201ENST00000318080 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
CRAT-201ENST00000318080 CENPJQ9HC77 1338 aaPredicted RBP20.53■□□□□ 0.88
CRAT-201ENST00000318080 BCL2L13Q9BXK5 485 aa20.53■□□□□ 0.88
CRAT-201ENST00000318080 ADGRB3O60242 1522 aa20.53■□□□□ 0.88
CRAT-201ENST00000318080 MYO5BQ9ULV0 1848 aa20.52■□□□□ 0.88
CRAT-201ENST00000318080 PIK3C2BO00750 1634 aa20.52■□□□□ 0.87
CRAT-201ENST00000318080 RLBP1P12271 317 aa20.51■□□□□ 0.87
CRAT-201ENST00000318080 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
CRAT-201ENST00000318080 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
CRAT-201ENST00000318080 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
CRAT-201ENST00000318080 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
CRAT-201ENST00000318080 XRCC6P12956 609 aaKnown RBP eCLIP20.5■□□□□ 0.87
CRAT-201ENST00000318080 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
CRAT-201ENST00000318080 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
CRAT-201ENST00000318080 STAG3Q9UJ98 1225 aa20.47■□□□□ 0.87
CRAT-201ENST00000318080 RARSP54136 660 aaKnown RBP20.46■□□□□ 0.87
CRAT-201ENST00000318080 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
CRAT-201ENST00000318080 NLRP1Q9C000 1473 aa20.45■□□□□ 0.86
CRAT-201ENST00000318080 SPATA31D1Q6ZQQ2 1576 aa20.44■□□□□ 0.86
CRAT-201ENST00000318080 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
CRAT-201ENST00000318080 TMEM131LA2VDJ0 1609 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
CRAT-201ENST00000318080 PPLO60437 1756 aa20.42■□□□□ 0.86
CRAT-201ENST00000318080 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
CRAT-201ENST00000318080 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
CRAT-201ENST00000318080 KDM5AP29375 1690 aaKnown RBP20.42■□□□□ 0.86
CRAT-201ENST00000318080 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
CRAT-201ENST00000318080 NEXMIFQ5QGS0 1516 aa20.41■□□□□ 0.86
CRAT-201ENST00000318080 TBC1D2Q9BYX2 928 aa20.41■□□□□ 0.86
CRAT-201ENST00000318080 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
CRAT-201ENST00000318080 TNRQ92752 1358 aa20.4■□□□□ 0.86
CRAT-201ENST00000318080 MYOM2P54296 1465 aa20.39■□□□□ 0.85
CRAT-201ENST00000318080 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.85
CRAT-201ENST00000318080 GOLGA6L3A6NEY3 463 aa20.39■□□□□ 0.85
CRAT-201ENST00000318080 POLR3AO14802 1390 aaPredicted RBP20.39■□□□□ 0.85
CRAT-201ENST00000318080 BECN1Q14457 450 aa20.39■□□□□ 0.85
CRAT-201ENST00000318080 L1TD1Q5T7N2 865 aaKnown RBP20.39■□□□□ 0.85
CRAT-201ENST00000318080 TRAK1Q9UPV9 953 aa20.38■□□□□ 0.85
CRAT-201ENST00000318080 C3P01024 1663 aa20.38■□□□□ 0.85
CRAT-201ENST00000318080 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
CRAT-201ENST00000318080 HSP90AA2PQ14568 343 aaPredicted RBP20.37■□□□□ 0.85
CRAT-201ENST00000318080 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms