RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 KCNA6P17658 529 aa34.28■■■■□ 3.08
CDPF1-201ENST00000314567 XRN1Q8IZH2 1706 aaKnown RBP34.28■■■■□ 3.08
CDPF1-201ENST00000314567 SBNO2Q9Y2G9 1366 aa34.28■■■■□ 3.08
CDPF1-201ENST00000314567 PIK3R4Q99570 1358 aa34.24■■■■□ 3.07
CDPF1-201ENST00000314567 TULP4Q9NRJ4 1543 aa34.24■■■■□ 3.07
CDPF1-201ENST00000314567 FAM135BQ49AJ0 1406 aa34.23■■■■□ 3.07
CDPF1-201ENST00000314567 RBM33Q96EV2 1170 aaKnown RBP34.2■■■■□ 3.06
CDPF1-201ENST00000314567 SIRT1Q96EB6 747 aa34.19■■■■□ 3.06
CDPF1-201ENST00000314567 PRKRIP1Q9H875 184 aaPredicted RBP34.18■■■■□ 3.06
CDPF1-201ENST00000314567 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.18■■■■□ 3.06
CDPF1-201ENST00000314567 PTCH1Q13635 1447 aa34.18■■■■□ 3.06
CDPF1-201ENST00000314567 EVC2Q86UK5 1308 aa34.16■■■■□ 3.06
CDPF1-201ENST00000314567 CABP2Q9NPB3 220 aa34.16■■■■□ 3.06
CDPF1-201ENST00000314567 STRCP1A6NGW2 1772 aa34.12■■■■□ 3.05
CDPF1-201ENST00000314567 CDCA8Q53HL2 280 aa34.12■■■■□ 3.05
CDPF1-201ENST00000314567 MYOM1P52179 1685 aa34.11■■■■□ 3.05
CDPF1-201ENST00000314567 SLC24A1O60721 1099 aa34.11■■■■□ 3.05
CDPF1-201ENST00000314567 CDK19Q9BWU1 502 aa34.11■■■■□ 3.05
CDPF1-201ENST00000314567 SRPK2P78362 688 aaKnown RBP34.1■■■■□ 3.05
CDPF1-201ENST00000314567 NWD1Q149M9 1564 aa34.1■■■■□ 3.05
CDPF1-201ENST00000314567 WASLO00401 505 aaPredicted RBP34.04■■■■□ 3.04
CDPF1-201ENST00000314567 KTN1Q86UP2 1357 aaKnown RBP34.03■■■■□ 3.04
CDPF1-201ENST00000314567 TMC1Q8TDI8 760 aa34.02■■■■□ 3.04
CDPF1-201ENST00000314567 PANK3Q9H999 370 aa34.01■■■■□ 3.04
CDPF1-201ENST00000314567 NUTM2FA1L443 756 aa34.01■■■■□ 3.03
CDPF1-201ENST00000314567 SLC12A5Q9H2X9 1139 aa34.01■■■■□ 3.03
CDPF1-201ENST00000314567 ADGRB2O60241 1585 aa34■■■■□ 3.03
CDPF1-201ENST00000314567 NALCNQ8IZF0 1738 aa34■■■■□ 3.03
CDPF1-201ENST00000314567 ZNF335Q9H4Z2 1342 aaPredicted RBP34■■■■□ 3.03
CDPF1-201ENST00000314567 PROSER2Q86WR7 435 aaPredicted RBP33.99■■■■□ 3.03
CDPF1-201ENST00000314567 CNGB1Q14028 1251 aaPredicted RBP33.97■■■■□ 3.03
CDPF1-201ENST00000314567 AEBP2Q6ZN18 517 aaPredicted RBP33.97■■■■□ 3.03
CDPF1-201ENST00000314567 NKTRP30414 1462 aaKnown RBP33.95■■■■□ 3.03
CDPF1-201ENST00000314567 PUS7Q96PZ0 661 aaKnown RBP33.94■■■■□ 3.02
CDPF1-201ENST00000314567 PRR36Q9H6K5 1346 aa33.93■■■■□ 3.02
CDPF1-201ENST00000314567 C14orf37Q86TY3 774 aa33.93■■■■□ 3.02
CDPF1-201ENST00000314567 ATAD2Q6PL18 1390 aa33.92■■■■□ 3.02
CDPF1-201ENST00000314567 NUDT16Q96DE0 195 aaKnown RBP33.9■■■■□ 3.02
CDPF1-201ENST00000314567 DMRT2Q9Y5R5 561 aa33.9■■■■□ 3.02
CDPF1-201ENST00000314567 CABP1Q9NZU7 370 aa33.9■■■■□ 3.02
CDPF1-201ENST00000314567 TMEM94Q12767 1356 aa33.89■■■■□ 3.02
CDPF1-201ENST00000314567 ADGRL3Q9HAR2 1447 aa33.89■■■■□ 3.02
CDPF1-201ENST00000314567 ATP7BP35670 1465 aa33.89■■■■□ 3.02
CDPF1-201ENST00000314567 PER1O15534 1290 aaPredicted RBP33.88■■■■□ 3.01
CDPF1-201ENST00000314567 SCAF1Q9H7N4 1312 aaKnown RBP33.88■■■■□ 3.01
CDPF1-201ENST00000314567 RALBP1Q15311 655 aa33.88■■■■□ 3.01
CDPF1-201ENST00000314567 CARD14Q9BXL6 1004 aa33.87■■■■□ 3.01
CDPF1-201ENST00000314567 MRS2Q9HD23 443 aa33.87■■■■□ 3.01
CDPF1-201ENST00000314567 RGPD8O14715 1765 aaPredicted RBP33.87■■■■□ 3.01
CDPF1-201ENST00000314567 USP32Q8NFA0 1604 aa33.87■■■■□ 3.01
CDPF1-201ENST00000314567 PPIP5K1Q6PFW1 1433 aa33.84■■■■□ 3.01
CDPF1-201ENST00000314567 FMN2Q9NZ56 1722 aa33.84■■■■□ 3.01
CDPF1-201ENST00000314567 XIRP1Q702N8 1843 aaKnown RBP33.83■■■■□ 3.01
CDPF1-201ENST00000314567 CDC42BPGQ6DT37 1551 aa33.83■■■■□ 3.01
CDPF1-201ENST00000314567 CD163L1Q9NR16 1453 aa33.83■■■■□ 3.01
CDPF1-201ENST00000314567 CCDC184Q52MB2 194 aa33.82■■■■□ 3.01
CDPF1-201ENST00000314567 PARD3Q8TEW0 1356 aa33.81■■■■□ 3
CDPF1-201ENST00000314567 CCDC61Q9Y6R9 512 aa33.81■■■■□ 3
CDPF1-201ENST00000314567 LRRC7Q96NW7 1537 aa33.8■■■■□ 3
CDPF1-201ENST00000314567 A0A1W2PP64 1363 aa33.8■■■■□ 3
CDPF1-201ENST00000314567 MYBBP1AQ9BQG0 1328 aaKnown RBP33.79■■■■□ 3
CDPF1-201ENST00000314567 TOPAZ1Q8N9V7 1692 aa33.79■■■■□ 3
CDPF1-201ENST00000314567 ANKRD36BQ8N2N9 1353 aa33.78■■■■□ 3
CDPF1-201ENST00000314567 NINLQ9Y2I6 1382 aa33.78■■■■□ 3
CDPF1-201ENST00000314567 KNSTRNQ9Y448 316 aa33.76■■■■□ 3
CDPF1-201ENST00000314567 NSD3Q9BZ95 1437 aa33.76■■■■□ 3
CDPF1-201ENST00000314567 CC2D1BQ5T0F9 858 aaKnown RBP33.75■■■□□ 2.99
CDPF1-201ENST00000314567 C19orf44Q9H6X5 657 aa33.75■■■□□ 2.99
CDPF1-201ENST00000314567 GTF3C3Q9Y5Q9 886 aa33.75■■■□□ 2.99
CDPF1-201ENST00000314567 BRD4O60885 1362 aaPredicted RBP33.75■■■□□ 2.99
CDPF1-201ENST00000314567 PMFBP1Q8TBY8 1022 aa33.74■■■□□ 2.99
CDPF1-201ENST00000314567 TERF2IPQ9NYB0 399 aa33.71■■■□□ 2.99
CDPF1-201ENST00000314567 AMER1Q5JTC6 1135 aaPredicted RBP33.71■■■□□ 2.99
CDPF1-201ENST00000314567 ANKARQ7Z5J8 1434 aa33.7■■■□□ 2.99
CDPF1-201ENST00000314567 ITSN1Q15811 1721 aa33.69■■■□□ 2.98
CDPF1-201ENST00000314567 HDGFL2Q7Z4V5 671 aaPredicted RBP33.69■■■□□ 2.98
CDPF1-201ENST00000314567 NCOA3Q9Y6Q9 1424 aa33.68■■■□□ 2.98
CDPF1-201ENST00000314567 ACEP12821 1306 aa33.67■■■□□ 2.98
CDPF1-201ENST00000314567 CPSF1Q10570 1443 aaKnown RBP33.67■■■□□ 2.98
CDPF1-201ENST00000314567 NPC1L1Q9UHC9 1359 aa33.66■■■□□ 2.98
CDPF1-201ENST00000314567 PLEKHG3A1L390 1219 aa33.66■■■□□ 2.98
CDPF1-201ENST00000314567 HNRNPUQ00839 825 aaKnown RBP eCLIP33.66■■■□□ 2.98
CDPF1-201ENST00000314567 AKAP12Q02952 1782 aa33.65■■■□□ 2.98
CDPF1-201ENST00000314567 FAM9BQ8IZU0 186 aa33.65■■■□□ 2.98
CDPF1-201ENST00000314567 MSH6P52701 1360 aa33.65■■■□□ 2.98
CDPF1-201ENST00000314567 ATF3P18847 181 aa33.65■■■□□ 2.98
CDPF1-201ENST00000314567 NLRP13Q86W25 1043 aa33.65■■■□□ 2.98
CDPF1-201ENST00000314567 ORAI2Q96SN7 254 aa33.64■■■□□ 2.98
CDPF1-201ENST00000314567 ESCO1Q5FWF5 840 aa33.63■■■□□ 2.97
CDPF1-201ENST00000314567 LTBP4Q8N2S1 1624 aa33.62■■■□□ 2.97
CDPF1-201ENST00000314567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.62■■■□□ 2.97
CDPF1-201ENST00000314567 MON2Q7Z3U7 1717 aa33.61■■■□□ 2.97
CDPF1-201ENST00000314567 NGDNQ8NEJ9 315 aaKnown RBP33.6■■■□□ 2.97
CDPF1-201ENST00000314567 C1orf167Q5SNV9 1468 aa33.6■■■□□ 2.97
CDPF1-201ENST00000314567 DCCP43146 1447 aa33.6■■■□□ 2.97
CDPF1-201ENST00000314567 MST1RQ04912 1400 aa33.6■■■□□ 2.97
CDPF1-201ENST00000314567 PHF8Q9UPP1 1060 aa33.59■■■□□ 2.97
CDPF1-201ENST00000314567 CADPS2Q86UW7 1296 aa33.57■■■□□ 2.96
CDPF1-201ENST00000314567 CGNL1Q0VF96 1302 aa33.57■■■□□ 2.96
CDPF1-201ENST00000314567 PNISRQ8TF01 805 aaKnown RBP33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms