RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 AMOTL2Q9Y2J4 779 aa30.86■■■□□ 2.53
IRF3-201ENST00000309877 PER1O15534 1290 aaPredicted RBP30.85■■■□□ 2.53
IRF3-201ENST00000309877 SRPK2P78362 688 aaKnown RBP30.85■■■□□ 2.53
IRF3-201ENST00000309877 CNGB1Q14028 1251 aaPredicted RBP30.84■■■□□ 2.53
IRF3-201ENST00000309877 CABP2Q9NPB3 220 aa30.84■■■□□ 2.53
IRF3-201ENST00000309877 PIK3R4Q99570 1358 aa30.84■■■□□ 2.53
IRF3-201ENST00000309877 ROBO2Q9HCK4 1378 aa30.84■■■□□ 2.53
IRF3-201ENST00000309877 TMC1Q8TDI8 760 aa30.84■■■□□ 2.53
IRF3-201ENST00000309877 MYOM1P52179 1685 aa30.83■■■□□ 2.53
IRF3-201ENST00000309877 NPHP4O75161 1426 aaPredicted RBP30.83■■■□□ 2.53
IRF3-201ENST00000309877 NCKAP5LQ9HCH0 1330 aa30.82■■■□□ 2.52
IRF3-201ENST00000309877 CDK19Q9BWU1 502 aa30.81■■■□□ 2.52
IRF3-201ENST00000309877 KNSTRNQ9Y448 316 aa30.8■■■□□ 2.52
IRF3-201ENST00000309877 ATAD2Q6PL18 1390 aa30.77■■■□□ 2.52
IRF3-201ENST00000309877 SLC12A5Q9H2X9 1139 aa30.77■■■□□ 2.52
IRF3-201ENST00000309877 PTCH1Q13635 1447 aa30.76■■■□□ 2.51
IRF3-201ENST00000309877 KTN1Q86UP2 1357 aaKnown RBP30.75■■■□□ 2.51
IRF3-201ENST00000309877 WASLO00401 505 aaPredicted RBP30.74■■■□□ 2.51
IRF3-201ENST00000309877 RALBP1Q15311 655 aa30.74■■■□□ 2.51
IRF3-201ENST00000309877 NINLQ9Y2I6 1382 aa30.73■■■□□ 2.51
IRF3-201ENST00000309877 KCNA6P17658 529 aa30.71■■■□□ 2.51
IRF3-201ENST00000309877 CC2D1BQ5T0F9 858 aaKnown RBP30.71■■■□□ 2.51
IRF3-201ENST00000309877 YTHDC1Q96MU7 727 aaKnown RBP30.71■■■□□ 2.51
IRF3-201ENST00000309877 XRN1Q8IZH2 1706 aaKnown RBP30.7■■■□□ 2.51
IRF3-201ENST00000309877 HSPA2P54652 639 aa30.69■■■□□ 2.5
IRF3-201ENST00000309877 CARD14Q9BXL6 1004 aa30.68■■■□□ 2.5
IRF3-201ENST00000309877 ANKRD36BQ8N2N9 1353 aa30.65■■■□□ 2.5
IRF3-201ENST00000309877 AMER1Q5JTC6 1135 aaPredicted RBP30.65■■■□□ 2.5
IRF3-201ENST00000309877 PARD3Q8TEW0 1356 aa30.65■■■□□ 2.5
IRF3-201ENST00000309877 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.64■■■□□ 2.5
IRF3-201ENST00000309877 CHD2O14647 1828 aaKnown RBP30.64■■■□□ 2.49
IRF3-201ENST00000309877 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.49
IRF3-201ENST00000309877 MYBBP1AQ9BQG0 1328 aaKnown RBP30.63■■■□□ 2.49
IRF3-201ENST00000309877 ADGRB2O60241 1585 aa30.63■■■□□ 2.49
IRF3-201ENST00000309877 TERF2IPQ9NYB0 399 aa30.63■■■□□ 2.49
IRF3-201ENST00000309877 MRS2Q9HD23 443 aa30.62■■■□□ 2.49
IRF3-201ENST00000309877 NPC1L1Q9UHC9 1359 aa30.62■■■□□ 2.49
IRF3-201ENST00000309877 CABP1Q9NZU7 370 aa30.62■■■□□ 2.49
IRF3-201ENST00000309877 NSD3Q9BZ95 1437 aa30.61■■■□□ 2.49
IRF3-201ENST00000309877 NUDT16Q96DE0 195 aaKnown RBP30.61■■■□□ 2.49
IRF3-201ENST00000309877 CCDC184Q52MB2 194 aa30.59■■■□□ 2.49
IRF3-201ENST00000309877 HDGFL2Q7Z4V5 671 aaPredicted RBP30.59■■■□□ 2.49
IRF3-201ENST00000309877 A0A1W2PP64 1363 aa30.57■■■□□ 2.48
IRF3-201ENST00000309877 CCDC61Q9Y6R9 512 aa30.57■■■□□ 2.48
IRF3-201ENST00000309877 PPIP5K1Q6PFW1 1433 aa30.55■■■□□ 2.48
IRF3-201ENST00000309877 CGNL1Q0VF96 1302 aa30.54■■■□□ 2.48
IRF3-201ENST00000309877 NLRP13Q86W25 1043 aa30.52■■■□□ 2.48
IRF3-201ENST00000309877 ATP7BP35670 1465 aa30.52■■■□□ 2.48
IRF3-201ENST00000309877 CD163L1Q9NR16 1453 aa30.52■■■□□ 2.48
IRF3-201ENST00000309877 PRR36Q9H6K5 1346 aa30.51■■■□□ 2.48
IRF3-201ENST00000309877 BRD4O60885 1362 aaPredicted RBP30.51■■■□□ 2.47
IRF3-201ENST00000309877 NWD1Q149M9 1564 aa30.5■■■□□ 2.47
IRF3-201ENST00000309877 NUTM2FA1L443 756 aa30.49■■■□□ 2.47
IRF3-201ENST00000309877 USP32Q8NFA0 1604 aa30.48■■■□□ 2.47
IRF3-201ENST00000309877 PROSER2Q86WR7 435 aaPredicted RBP30.46■■■□□ 2.47
IRF3-201ENST00000309877 RBM33Q96EV2 1170 aaKnown RBP30.46■■■□□ 2.47
IRF3-201ENST00000309877 NSD2O96028 1365 aa30.45■■■□□ 2.47
IRF3-201ENST00000309877 CENPBP07199 599 aaPredicted RBP30.45■■■□□ 2.46
IRF3-201ENST00000309877 C14orf37Q86TY3 774 aa30.45■■■□□ 2.46
IRF3-201ENST00000309877 MORC1Q86VD1 984 aa30.45■■■□□ 2.46
IRF3-201ENST00000309877 PPP2R1AP30153 589 aa30.44■■■□□ 2.46
IRF3-201ENST00000309877 FAM9BQ8IZU0 186 aa30.44■■■□□ 2.46
IRF3-201ENST00000309877 CPSF1Q10570 1443 aaKnown RBP30.43■■■□□ 2.46
IRF3-201ENST00000309877 NKTRP30414 1462 aaKnown RBP30.43■■■□□ 2.46
IRF3-201ENST00000309877 ZNF692Q9BU19 519 aaPredicted RBP30.42■■■□□ 2.46
IRF3-201ENST00000309877 ADGRL3Q9HAR2 1447 aa30.42■■■□□ 2.46
IRF3-201ENST00000309877 CDC42BPGQ6DT37 1551 aa30.42■■■□□ 2.46
IRF3-201ENST00000309877 STRCQ7RTU9 1775 aa30.41■■■□□ 2.46
IRF3-201ENST00000309877 PLEKHG3A1L390 1219 aa30.41■■■□□ 2.46
IRF3-201ENST00000309877 ANKARQ7Z5J8 1434 aa30.4■■■□□ 2.46
IRF3-201ENST00000309877 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
IRF3-201ENST00000309877 TOPAZ1Q8N9V7 1692 aa30.38■■■□□ 2.45
IRF3-201ENST00000309877 EDC4Q6P2E9 1401 aaKnown RBP30.37■■■□□ 2.45
IRF3-201ENST00000309877 ACEP12821 1306 aa30.37■■■□□ 2.45
IRF3-201ENST00000309877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.36■■■□□ 2.45
IRF3-201ENST00000309877 FYB1O15117 783 aa30.36■■■□□ 2.45
IRF3-201ENST00000309877 PNISRQ8TF01 805 aaKnown RBP30.36■■■□□ 2.45
IRF3-201ENST00000309877 FMN2Q9NZ56 1722 aa30.35■■■□□ 2.45
IRF3-201ENST00000309877 GGNBP2Q9H3C7 697 aa30.35■■■□□ 2.45
IRF3-201ENST00000309877 ITSN1Q15811 1721 aa30.33■■■□□ 2.45
IRF3-201ENST00000309877 TNNT2P45379 298 aaPredicted RBP30.33■■■□□ 2.45
IRF3-201ENST00000309877 PMFBP1Q8TBY8 1022 aa30.33■■■□□ 2.45
IRF3-201ENST00000309877 NGDNQ8NEJ9 315 aaKnown RBP30.31■■■□□ 2.44
IRF3-201ENST00000309877 AKAP12Q02952 1782 aa30.3■■■□□ 2.44
IRF3-201ENST00000309877 C19orf44Q9H6X5 657 aa30.3■■■□□ 2.44
IRF3-201ENST00000309877 DMRT2Q9Y5R5 561 aa30.3■■■□□ 2.44
IRF3-201ENST00000309877 TMEM94Q12767 1356 aa30.29■■■□□ 2.44
IRF3-201ENST00000309877 MON2Q7Z3U7 1717 aa30.29■■■□□ 2.44
IRF3-201ENST00000309877 STRCP1A6NGW2 1772 aa30.28■■■□□ 2.44
IRF3-201ENST00000309877 NCOA3Q9Y6Q9 1424 aa30.28■■■□□ 2.44
IRF3-201ENST00000309877 POLR3AO14802 1390 aaPredicted RBP30.27■■■□□ 2.44
IRF3-201ENST00000309877 HNRNPUQ00839 825 aaKnown RBP eCLIP30.27■■■□□ 2.442e-8■□□□□ 8.3
IRF3-201ENST00000309877 RGPD8O14715 1765 aaPredicted RBP30.26■■■□□ 2.43
IRF3-201ENST00000309877 KIF20BQ96Q89 1820 aa30.25■■■□□ 2.43
IRF3-201ENST00000309877 USP6P35125 1406 aa30.25■■■□□ 2.43
IRF3-201ENST00000309877 TTC21BQ7Z4L5 1316 aa30.24■■■□□ 2.43
IRF3-201ENST00000309877 NME9Q86XW9 330 aa30.24■■■□□ 2.43
IRF3-201ENST00000309877 PHF8Q9UPP1 1060 aa30.23■■■□□ 2.43
IRF3-201ENST00000309877 ANKRD26Q9UPS8 1709 aa30.22■■■□□ 2.43
IRF3-201ENST00000309877 ESCO1Q5FWF5 840 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms