RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 TSR2Q969E8 191 aaKnown RBP19.65■□□□□ 0.74
PGAP3-202ENST00000309862 VIRMAQ69YN4 1812 aaKnown RBP19.65■□□□□ 0.74
PGAP3-202ENST00000309862 L1TD1Q5T7N2 865 aaKnown RBP19.65■□□□□ 0.74
PGAP3-202ENST00000309862 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
PGAP3-202ENST00000309862 PTPRTO14522 1441 aa19.64■□□□□ 0.74
PGAP3-202ENST00000309862 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.74
PGAP3-202ENST00000309862 XRCC6P12956 609 aaKnown RBP eCLIP19.64■□□□□ 0.73
PGAP3-202ENST00000309862 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.73
PGAP3-202ENST00000309862 TMEM132EQ6IEE7 984 aa19.64■□□□□ 0.73
PGAP3-202ENST00000309862 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
PGAP3-202ENST00000309862 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
PGAP3-202ENST00000309862 CEP152O94986 1710 aa19.63■□□□□ 0.73
PGAP3-202ENST00000309862 MCM4P33991 863 aa19.62■□□□□ 0.73
PGAP3-202ENST00000309862 C22orf23Q9BZE7 217 aa19.62■□□□□ 0.73
PGAP3-202ENST00000309862 GOLGA6L3A6NEY3 463 aa19.61■□□□□ 0.73
PGAP3-202ENST00000309862 MVPQ14764 893 aaKnown RBP19.61■□□□□ 0.73
PGAP3-202ENST00000309862 WDR63Q8IWG1 891 aa19.61■□□□□ 0.73
PGAP3-202ENST00000309862 KANK1Q14678 1352 aa19.6■□□□□ 0.73
PGAP3-202ENST00000309862 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
PGAP3-202ENST00000309862 ZKSCAN2Q63HK3 967 aa19.59■□□□□ 0.73
PGAP3-202ENST00000309862 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
PGAP3-202ENST00000309862 SLC24A1O60721 1099 aa19.58■□□□□ 0.73
PGAP3-202ENST00000309862 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.73
PGAP3-202ENST00000309862 ABCC1P33527 1531 aa19.58■□□□□ 0.72
PGAP3-202ENST00000309862 NUTM2DQ5VT03 806 aaPredicted RBP19.58■□□□□ 0.72
PGAP3-202ENST00000309862 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.72
PGAP3-202ENST00000309862 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
PGAP3-202ENST00000309862 UBE2Q2Q8WVN8 375 aa19.57■□□□□ 0.72
PGAP3-202ENST00000309862 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
PGAP3-202ENST00000309862 TRAK2O60296 914 aa19.57■□□□□ 0.72
PGAP3-202ENST00000309862 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
PGAP3-202ENST00000309862 U2SURPO15042 1029 aaKnown RBP19.55■□□□□ 0.72
PGAP3-202ENST00000309862 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
PGAP3-202ENST00000309862 CHMP5Q9NZZ3 219 aa19.55■□□□□ 0.72
PGAP3-202ENST00000309862 ABCA6Q8N139 1617 aa19.55■□□□□ 0.72
PGAP3-202ENST00000309862 TRIM27P14373 513 aa19.54■□□□□ 0.72
PGAP3-202ENST00000309862 AAMPQ13685 434 aa19.54■□□□□ 0.72
PGAP3-202ENST00000309862 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
PGAP3-202ENST00000309862 NOS1P29475 1434 aa19.53■□□□□ 0.72
PGAP3-202ENST00000309862 FSD2A1L4K1 749 aa19.52■□□□□ 0.72
PGAP3-202ENST00000309862 NAP1L5Q96NT1 182 aaPredicted RBP19.52■□□□□ 0.72
PGAP3-202ENST00000309862 SHPRHQ149N8 1683 aa19.52■□□□□ 0.72
PGAP3-202ENST00000309862 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.71
PGAP3-202ENST00000309862 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
PGAP3-202ENST00000309862 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
PGAP3-202ENST00000309862 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
PGAP3-202ENST00000309862 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
PGAP3-202ENST00000309862 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
PGAP3-202ENST00000309862 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
PGAP3-202ENST00000309862 LNPKQ9C0E8 428 aa19.49■□□□□ 0.71
PGAP3-202ENST00000309862 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
PGAP3-202ENST00000309862 TMEM57Q8N5G2 664 aa19.49■□□□□ 0.71
PGAP3-202ENST00000309862 TET3O43151 1660 aa19.48■□□□□ 0.71
PGAP3-202ENST00000309862 RTEL1-TNFRSF6BF6WH68 1400 aa19.48■□□□□ 0.71
PGAP3-202ENST00000309862 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
PGAP3-202ENST00000309862 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
PGAP3-202ENST00000309862 CHD1O14646 1710 aa19.47■□□□□ 0.71
PGAP3-202ENST00000309862 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
PGAP3-202ENST00000309862 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
PGAP3-202ENST00000309862 KIAA1210Q9ULL0 1709 aa19.46■□□□□ 0.71
PGAP3-202ENST00000309862 DDX19BQ9UMR2 479 aa19.46■□□□□ 0.71
PGAP3-202ENST00000309862 MYOM2P54296 1465 aa19.46■□□□□ 0.71
PGAP3-202ENST00000309862 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
PGAP3-202ENST00000309862 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
PGAP3-202ENST00000309862 ZCCHC11Q5TAX3 1644 aaKnown RBP19.45■□□□□ 0.7
PGAP3-202ENST00000309862 SBNO2Q9Y2G9 1366 aa19.45■□□□□ 0.7
PGAP3-202ENST00000309862 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
PGAP3-202ENST00000309862 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
PGAP3-202ENST00000309862 GGT6Q6P531 493 aa19.44■□□□□ 0.7
PGAP3-202ENST00000309862 C14orf93Q9H972 538 aaKnown RBP19.44■□□□□ 0.7
PGAP3-202ENST00000309862 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
PGAP3-202ENST00000309862 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
PGAP3-202ENST00000309862 ZNF692Q9BU19 519 aaPredicted RBP19.44■□□□□ 0.7
PGAP3-202ENST00000309862 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
PGAP3-202ENST00000309862 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
PGAP3-202ENST00000309862 ATP7AQ04656 1500 aa19.42■□□□□ 0.7
PGAP3-202ENST00000309862 MRE11P49959 708 aa19.42■□□□□ 0.7
PGAP3-202ENST00000309862 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
PGAP3-202ENST00000309862 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
PGAP3-202ENST00000309862 STK26Q9P289 416 aa19.41■□□□□ 0.7
PGAP3-202ENST00000309862 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
PGAP3-202ENST00000309862 RIPK4P57078 832 aa19.41■□□□□ 0.7
PGAP3-202ENST00000309862 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
PGAP3-202ENST00000309862 CLCN1P35523 988 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 C1orf115Q9H7X2 142 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 FANCAO15360 1455 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
PGAP3-202ENST00000309862 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
PGAP3-202ENST00000309862 KIF1BO60333 1816 aa19.39■□□□□ 0.7
PGAP3-202ENST00000309862 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
PGAP3-202ENST00000309862 PLEKHF1Q96S99 279 aa19.39■□□□□ 0.69
PGAP3-202ENST00000309862 EVC2Q86UK5 1308 aa19.39■□□□□ 0.69
PGAP3-202ENST00000309862 VWDEQ8N2E2 1590 aa19.38■□□□□ 0.69
PGAP3-202ENST00000309862 CD2BP2O95400 341 aaKnown RBP19.38■□□□□ 0.69
PGAP3-202ENST00000309862 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
PGAP3-202ENST00000309862 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
PGAP3-202ENST00000309862 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
PGAP3-202ENST00000309862 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms