RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
PGAP3-202ENST00000309862 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
PGAP3-202ENST00000309862 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
PGAP3-202ENST00000309862 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
PGAP3-202ENST00000309862 HRCP23327 699 aa25.83■■□□□ 1.73
PGAP3-202ENST00000309862 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
PGAP3-202ENST00000309862 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
PGAP3-202ENST00000309862 DCAF8L2P0C7V8 631 aa25.75■■□□□ 1.71
PGAP3-202ENST00000309862 PCGF6Q9BYE7 350 aa25.71■■□□□ 1.71
PGAP3-202ENST00000309862 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
PGAP3-202ENST00000309862 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
PGAP3-202ENST00000309862 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
PGAP3-202ENST00000309862 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
PGAP3-202ENST00000309862 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
PGAP3-202ENST00000309862 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
PGAP3-202ENST00000309862 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
PGAP3-202ENST00000309862 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
PGAP3-202ENST00000309862 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
PGAP3-202ENST00000309862 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
PGAP3-202ENST00000309862 ABCC9O60706 1549 aa24.37■■□□□ 1.49
PGAP3-202ENST00000309862 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
PGAP3-202ENST00000309862 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
PGAP3-202ENST00000309862 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
PGAP3-202ENST00000309862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
PGAP3-202ENST00000309862 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
PGAP3-202ENST00000309862 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
PGAP3-202ENST00000309862 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
PGAP3-202ENST00000309862 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
PGAP3-202ENST00000309862 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
PGAP3-202ENST00000309862 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
PGAP3-202ENST00000309862 ACIN1Q9UKV3 1341 aaKnown RBP23.73■■□□□ 1.39
PGAP3-202ENST00000309862 WIZO95785 1651 aa23.68■■□□□ 1.38
PGAP3-202ENST00000309862 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
PGAP3-202ENST00000309862 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
PGAP3-202ENST00000309862 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
PGAP3-202ENST00000309862 NACADO15069 1562 aa23.44■■□□□ 1.34
PGAP3-202ENST00000309862 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
PGAP3-202ENST00000309862 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
PGAP3-202ENST00000309862 CEP162Q5TB80 1403 aa23.39■■□□□ 1.33
PGAP3-202ENST00000309862 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
PGAP3-202ENST00000309862 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
PGAP3-202ENST00000309862 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
PGAP3-202ENST00000309862 SOGA1O94964 1423 aa23.35■■□□□ 1.33
PGAP3-202ENST00000309862 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
PGAP3-202ENST00000309862 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
PGAP3-202ENST00000309862 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
PGAP3-202ENST00000309862 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
PGAP3-202ENST00000309862 RUSC2Q8N2Y8 1516 aa23.24■■□□□ 1.31
PGAP3-202ENST00000309862 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
PGAP3-202ENST00000309862 TNIKQ9UKE5 1360 aa23.22■■□□□ 1.31
PGAP3-202ENST00000309862 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
PGAP3-202ENST00000309862 MIER1Q8N108 512 aa23.14■■□□□ 1.29
PGAP3-202ENST00000309862 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
PGAP3-202ENST00000309862 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
PGAP3-202ENST00000309862 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
PGAP3-202ENST00000309862 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
PGAP3-202ENST00000309862 EEA1Q15075 1411 aa22.97■■□□□ 1.27
PGAP3-202ENST00000309862 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
PGAP3-202ENST00000309862 APLP2Q06481 763 aa22.88■■□□□ 1.25
PGAP3-202ENST00000309862 CLIP1P30622 1438 aa22.86■■□□□ 1.25
PGAP3-202ENST00000309862 MYT1Q01538 1121 aa22.81■■□□□ 1.24
PGAP3-202ENST00000309862 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
PGAP3-202ENST00000309862 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
PGAP3-202ENST00000309862 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
PGAP3-202ENST00000309862 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.23
PGAP3-202ENST00000309862 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
PGAP3-202ENST00000309862 KIF21BO75037 1637 aa22.63■■□□□ 1.21
PGAP3-202ENST00000309862 DHX57Q6P158 1386 aaKnown RBP22.56■■□□□ 1.2
PGAP3-202ENST00000309862 KANK4Q5T7N3 995 aaPredicted RBP22.55■■□□□ 1.2
PGAP3-202ENST00000309862 SUPT16HQ9Y5B9 1047 aaKnown RBP22.53■■□□□ 1.2
PGAP3-202ENST00000309862 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
PGAP3-202ENST00000309862 ITGAEP38570 1179 aa22.5■■□□□ 1.19
PGAP3-202ENST00000309862 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
PGAP3-202ENST00000309862 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
PGAP3-202ENST00000309862 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PGAP3-202ENST00000309862 KCNH8Q96L42 1107 aa22.4■■□□□ 1.18
PGAP3-202ENST00000309862 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.17
PGAP3-202ENST00000309862 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
PGAP3-202ENST00000309862 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
PGAP3-202ENST00000309862 BCANQ96GW7 911 aa22.29■■□□□ 1.16
PGAP3-202ENST00000309862 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
PGAP3-202ENST00000309862 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
PGAP3-202ENST00000309862 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
PGAP3-202ENST00000309862 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
PGAP3-202ENST00000309862 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
PGAP3-202ENST00000309862 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
PGAP3-202ENST00000309862 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
PGAP3-202ENST00000309862 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
PGAP3-202ENST00000309862 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
PGAP3-202ENST00000309862 FKBP8Q14318 412 aa22.12■■□□□ 1.13
PGAP3-202ENST00000309862 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
PGAP3-202ENST00000309862 ARHGAP35Q9NRY4 1499 aa22.1■■□□□ 1.13
PGAP3-202ENST00000309862 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
PGAP3-202ENST00000309862 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
PGAP3-202ENST00000309862 CUX1P39880 1505 aa22.07■■□□□ 1.12
PGAP3-202ENST00000309862 CUX2O14529 1486 aa22.07■■□□□ 1.12
PGAP3-202ENST00000309862 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
PGAP3-202ENST00000309862 ANP32EQ9BTT0 268 aa22.04■■□□□ 1.12
PGAP3-202ENST00000309862 MAPKBP1O60336 1514 aa22.04■■□□□ 1.12
PGAP3-202ENST00000309862 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms