RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NUP155O75694 1391 aa18.32■□□□□ 0.52
SMIM4-201ENST00000307106 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
SMIM4-201ENST00000307106 BLMP54132 1417 aaPredicted RBP18.31■□□□□ 0.52
SMIM4-201ENST00000307106 GLI3P10071 1580 aa18.3■□□□□ 0.52
SMIM4-201ENST00000307106 GJD4Q96KN9 370 aaPredicted RBP18.29■□□□□ 0.52
SMIM4-201ENST00000307106 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
SMIM4-201ENST00000307106 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
SMIM4-201ENST00000307106 PXDNQ92626 1479 aa18.26■□□□□ 0.51
SMIM4-201ENST00000307106 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
SMIM4-201ENST00000307106 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
SMIM4-201ENST00000307106 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
SMIM4-201ENST00000307106 NPHP3Q7Z494 1330 aa18.24■□□□□ 0.51
SMIM4-201ENST00000307106 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
SMIM4-201ENST00000307106 PPLO60437 1756 aa18.23■□□□□ 0.51
SMIM4-201ENST00000307106 USP32Q8NFA0 1604 aa18.22■□□□□ 0.51
SMIM4-201ENST00000307106 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
SMIM4-201ENST00000307106 PLCH1Q4KWH8 1693 aa18.22■□□□□ 0.51
SMIM4-201ENST00000307106 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
SMIM4-201ENST00000307106 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
SMIM4-201ENST00000307106 SLIT2O94813 1529 aa18.21■□□□□ 0.51
SMIM4-201ENST00000307106 NWD2Q9ULI1 1742 aa18.2■□□□□ 0.5
SMIM4-201ENST00000307106 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
SMIM4-201ENST00000307106 XPCQ01831 940 aaPredicted RBP18.19■□□□□ 0.5
SMIM4-201ENST00000307106 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
SMIM4-201ENST00000307106 FOXO3O43524 673 aa18.18■□□□□ 0.5
SMIM4-201ENST00000307106 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
SMIM4-201ENST00000307106 ABCA3Q99758 1704 aa18.17■□□□□ 0.5
SMIM4-201ENST00000307106 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
SMIM4-201ENST00000307106 FMN2Q9NZ56 1722 aa18.16■□□□□ 0.5
SMIM4-201ENST00000307106 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
SMIM4-201ENST00000307106 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
SMIM4-201ENST00000307106 PSDA5PKW4 1024 aaPredicted RBP18.14■□□□□ 0.49
SMIM4-201ENST00000307106 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
SMIM4-201ENST00000307106 ITGAEP38570 1179 aa18.13■□□□□ 0.49
SMIM4-201ENST00000307106 KNDC1Q76NI1 1749 aa18.12■□□□□ 0.49
SMIM4-201ENST00000307106 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
SMIM4-201ENST00000307106 NAIPQ13075 1403 aa18.12■□□□□ 0.49
SMIM4-201ENST00000307106 HRCP23327 699 aa18.11■□□□□ 0.49
SMIM4-201ENST00000307106 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
SMIM4-201ENST00000307106 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
SMIM4-201ENST00000307106 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
SMIM4-201ENST00000307106 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
SMIM4-201ENST00000307106 BAG6P46379 1132 aa18.09■□□□□ 0.49
SMIM4-201ENST00000307106 VPS72Q15906 364 aa18.09■□□□□ 0.49
SMIM4-201ENST00000307106 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
SMIM4-201ENST00000307106 CCDC9Q9Y3X0 531 aaKnown RBP18.08■□□□□ 0.48
SMIM4-201ENST00000307106 TNS1Q9HBL0 1735 aaKnown RBP18.08■□□□□ 0.48
SMIM4-201ENST00000307106 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-201ENST00000307106 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-201ENST00000307106 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
SMIM4-201ENST00000307106 TECPR2O15040 1411 aa18.04■□□□□ 0.48
SMIM4-201ENST00000307106 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
SMIM4-201ENST00000307106 A0A0G2JS52 829 aa18.03■□□□□ 0.48
SMIM4-201ENST00000307106 MYT1Q01538 1121 aa18.03■□□□□ 0.48
SMIM4-201ENST00000307106 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
SMIM4-201ENST00000307106 WAPLQ7Z5K2 1190 aa18.03■□□□□ 0.48
SMIM4-201ENST00000307106 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.48
SMIM4-201ENST00000307106 PLEKHG5O94827 1062 aa18.01■□□□□ 0.47
SMIM4-201ENST00000307106 EN1Q05925 392 aaPredicted RBP18.01■□□□□ 0.47
SMIM4-201ENST00000307106 STK26Q9P289 416 aa18.01■□□□□ 0.47
SMIM4-201ENST00000307106 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
SMIM4-201ENST00000307106 PLEKHH1Q9ULM0 1364 aa18■□□□□ 0.47
SMIM4-201ENST00000307106 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
SMIM4-201ENST00000307106 PSME1Q06323 249 aa17.97■□□□□ 0.47
SMIM4-201ENST00000307106 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
SMIM4-201ENST00000307106 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
SMIM4-201ENST00000307106 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
SMIM4-201ENST00000307106 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
SMIM4-201ENST00000307106 TRPM3Q9HCF6 1732 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-201ENST00000307106 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
SMIM4-201ENST00000307106 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
SMIM4-201ENST00000307106 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.46
SMIM4-201ENST00000307106 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
SMIM4-201ENST00000307106 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
SMIM4-201ENST00000307106 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
SMIM4-201ENST00000307106 ARHGEF10O15013 1369 aa17.95■□□□□ 0.46
SMIM4-201ENST00000307106 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
SMIM4-201ENST00000307106 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
SMIM4-201ENST00000307106 RREB1Q92766 1687 aa17.94■□□□□ 0.46
SMIM4-201ENST00000307106 ALS2Q96Q42 1657 aa17.94■□□□□ 0.46
SMIM4-201ENST00000307106 YY1P25490 414 aa17.94■□□□□ 0.46
SMIM4-201ENST00000307106 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
SMIM4-201ENST00000307106 NUP188Q5SRE5 1749 aa17.93■□□□□ 0.46
SMIM4-201ENST00000307106 CRYBG1Q9Y4K1 1723 aa17.93■□□□□ 0.46
SMIM4-201ENST00000307106 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
SMIM4-201ENST00000307106 BTG4Q9NY30 223 aa17.92■□□□□ 0.46
SMIM4-201ENST00000307106 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
SMIM4-201ENST00000307106 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
SMIM4-201ENST00000307106 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
SMIM4-201ENST00000307106 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
SMIM4-201ENST00000307106 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
SMIM4-201ENST00000307106 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
SMIM4-201ENST00000307106 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
SMIM4-201ENST00000307106 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
SMIM4-201ENST00000307106 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
SMIM4-201ENST00000307106 SPATA31E1Q6ZUB1 1445 aa17.86■□□□□ 0.45
SMIM4-201ENST00000307106 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
SMIM4-201ENST00000307106 CAMTA1Q9Y6Y1 1673 aa17.84■□□□□ 0.45
SMIM4-201ENST00000307106 PARD3Q8TEW0 1356 aa17.84■□□□□ 0.45
SMIM4-201ENST00000307106 TRIM37O94972 964 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms