RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 RABEP1Q15276 862 aa17.19■□□□□ 0.34
COL1A2-201ENST00000297268 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
COL1A2-201ENST00000297268 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
COL1A2-201ENST00000297268 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
COL1A2-201ENST00000297268 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
COL1A2-201ENST00000297268 CCDC70Q6NSX1 233 aa17.18■□□□□ 0.34
COL1A2-201ENST00000297268 CCDC73Q6ZRK6 1079 aa17.18■□□□□ 0.34
COL1A2-201ENST00000297268 ARGLU1Q9NWB6 273 aaPredicted RBP17.18■□□□□ 0.34
COL1A2-201ENST00000297268 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
COL1A2-201ENST00000297268 CPLX1O14810 134 aa17.18■□□□□ 0.34
COL1A2-201ENST00000297268 MNS1Q8NEH6 495 aa17.18■□□□□ 0.34
COL1A2-201ENST00000297268 PDE4CQ08493 712 aa17.17■□□□□ 0.34
COL1A2-201ENST00000297268 NEK4P51957 841 aa17.17■□□□□ 0.34
COL1A2-201ENST00000297268 PTPRGP23470 1445 aa17.17■□□□□ 0.34
COL1A2-201ENST00000297268 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
COL1A2-201ENST00000297268 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
COL1A2-201ENST00000297268 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
COL1A2-201ENST00000297268 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
COL1A2-201ENST00000297268 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
COL1A2-201ENST00000297268 TRIM29Q14134 588 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 MCM4P33991 863 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 FOSBP53539 338 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 CFTRP13569 1480 aa17.16■□□□□ 0.34
COL1A2-201ENST00000297268 ERC2O15083 957 aa17.15■□□□□ 0.34
COL1A2-201ENST00000297268 G3BP1Q13283 466 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL1A2-201ENST00000297268 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
COL1A2-201ENST00000297268 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
COL1A2-201ENST00000297268 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
COL1A2-201ENST00000297268 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
COL1A2-201ENST00000297268 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
COL1A2-201ENST00000297268 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.34
COL1A2-201ENST00000297268 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.34
COL1A2-201ENST00000297268 HFM1A2PYH4 1435 aa17.14■□□□□ 0.33
COL1A2-201ENST00000297268 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
COL1A2-201ENST00000297268 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
COL1A2-201ENST00000297268 ESPNB1AK53 854 aa17.14■□□□□ 0.33
COL1A2-201ENST00000297268 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
COL1A2-201ENST00000297268 TRIM5Q9C035 493 aa17.13■□□□□ 0.33
COL1A2-201ENST00000297268 MCM2P49736 904 aa17.13■□□□□ 0.33
COL1A2-201ENST00000297268 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
COL1A2-201ENST00000297268 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
COL1A2-201ENST00000297268 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
COL1A2-201ENST00000297268 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
COL1A2-201ENST00000297268 MARCH6O60337 910 aa17.12■□□□□ 0.33
COL1A2-201ENST00000297268 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
COL1A2-201ENST00000297268 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
COL1A2-201ENST00000297268 CWC22Q9HCG8 908 aaKnown RBP17.11■□□□□ 0.33
COL1A2-201ENST00000297268 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
COL1A2-201ENST00000297268 PCMTD1Q96MG8 357 aaPredicted RBP17.1■□□□□ 0.33
COL1A2-201ENST00000297268 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
COL1A2-201ENST00000297268 RRP9O43818 475 aaKnown RBP17.1■□□□□ 0.33
COL1A2-201ENST00000297268 UBTFL1P0CB47 393 aaPredicted RBP17.1■□□□□ 0.33
COL1A2-201ENST00000297268 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
COL1A2-201ENST00000297268 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
COL1A2-201ENST00000297268 PRKCSHP14314 528 aaPredicted RBP17.09■□□□□ 0.33
COL1A2-201ENST00000297268 FIBPO43427 364 aa17.09■□□□□ 0.33
COL1A2-201ENST00000297268 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
COL1A2-201ENST00000297268 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
COL1A2-201ENST00000297268 DDX58O95786 925 aaKnown RBP17.09■□□□□ 0.33
COL1A2-201ENST00000297268 APPP05067 770 aa17.09■□□□□ 0.33
COL1A2-201ENST00000297268 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.33
COL1A2-201ENST00000297268 UQCRHP07919 91 aa17.08■□□□□ 0.33
COL1A2-201ENST00000297268 TRDNQ13061 729 aa17.08■□□□□ 0.33
COL1A2-201ENST00000297268 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.33
COL1A2-201ENST00000297268 PSMA5P28066 241 aa17.08■□□□□ 0.32
COL1A2-201ENST00000297268 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
COL1A2-201ENST00000297268 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
COL1A2-201ENST00000297268 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
COL1A2-201ENST00000297268 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
COL1A2-201ENST00000297268 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
COL1A2-201ENST00000297268 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
COL1A2-201ENST00000297268 MPNDQ8N594 471 aa17.07■□□□□ 0.32
COL1A2-201ENST00000297268 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
COL1A2-201ENST00000297268 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
COL1A2-201ENST00000297268 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
COL1A2-201ENST00000297268 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 HSP90B2PQ58FF3 399 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 ACBD3Q9H3P7 528 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
COL1A2-201ENST00000297268 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
COL1A2-201ENST00000297268 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
COL1A2-201ENST00000297268 GNAI3P08754 354 aa17.05■□□□□ 0.32
COL1A2-201ENST00000297268 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
COL1A2-201ENST00000297268 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
COL1A2-201ENST00000297268 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
COL1A2-201ENST00000297268 PDILTQ8N807 584 aa17.04■□□□□ 0.32
COL1A2-201ENST00000297268 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
COL1A2-201ENST00000297268 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
COL1A2-201ENST00000297268 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
COL1A2-201ENST00000297268 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
COL1A2-201ENST00000297268 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
COL1A2-201ENST00000297268 PDCP20941 246 aa17.03■□□□□ 0.32
COL1A2-201ENST00000297268 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms