RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 NPC1L1Q9UHC9 1359 aa26.54■■□□□ 1.84
C11orf49-201ENST00000278460 SIRT1Q96EB6 747 aa26.52■■□□□ 1.84
C11orf49-201ENST00000278460 BRD4O60885 1362 aaPredicted RBP26.52■■□□□ 1.84
C11orf49-201ENST00000278460 FAM135BQ49AJ0 1406 aa26.52■■□□□ 1.84
C11orf49-201ENST00000278460 BCANQ96GW7 911 aa26.51■■□□□ 1.83
C11orf49-201ENST00000278460 SAFB2Q14151 953 aaKnown RBP eCLIP26.5■■□□□ 1.83
C11orf49-201ENST00000278460 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
C11orf49-201ENST00000278460 AMER1Q5JTC6 1135 aaPredicted RBP26.49■■□□□ 1.83
C11orf49-201ENST00000278460 NINLQ9Y2I6 1382 aa26.48■■□□□ 1.83
C11orf49-201ENST00000278460 MINK1Q8N4C8 1332 aaPredicted RBP26.48■■□□□ 1.83
C11orf49-201ENST00000278460 CC2D1BQ5T0F9 858 aaKnown RBP26.47■■□□□ 1.83
C11orf49-201ENST00000278460 ATAD2Q6PL18 1390 aa26.46■■□□□ 1.83
C11orf49-201ENST00000278460 PLEKHH1Q9ULM0 1364 aa26.45■■□□□ 1.83
C11orf49-201ENST00000278460 NLRP13Q86W25 1043 aa26.45■■□□□ 1.82
C11orf49-201ENST00000278460 TMC1Q8TDI8 760 aa26.44■■□□□ 1.82
C11orf49-201ENST00000278460 WAPLQ7Z5K2 1190 aa26.43■■□□□ 1.82
C11orf49-201ENST00000278460 CARD14Q9BXL6 1004 aa26.43■■□□□ 1.82
C11orf49-201ENST00000278460 SLC12A5Q9H2X9 1139 aa26.43■■□□□ 1.82
C11orf49-201ENST00000278460 CABP2Q9NPB3 220 aa26.43■■□□□ 1.82
C11orf49-201ENST00000278460 TBX22Q9Y458 520 aa26.43■■□□□ 1.82
C11orf49-201ENST00000278460 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
C11orf49-201ENST00000278460 SRPK2P78362 688 aaKnown RBP26.41■■□□□ 1.82
C11orf49-201ENST00000278460 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
C11orf49-201ENST00000278460 ADGRB2O60241 1585 aa26.4■■□□□ 1.82
C11orf49-201ENST00000278460 XRN1Q8IZH2 1706 aaKnown RBP26.39■■□□□ 1.82
C11orf49-201ENST00000278460 PTPRUQ92729 1446 aa26.39■■□□□ 1.82
C11orf49-201ENST00000278460 NSD3Q9BZ95 1437 aa26.39■■□□□ 1.82
C11orf49-201ENST00000278460 CDK19Q9BWU1 502 aa26.39■■□□□ 1.81
C11orf49-201ENST00000278460 PNISRQ8TF01 805 aaKnown RBP26.38■■□□□ 1.81
C11orf49-201ENST00000278460 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.38■■□□□ 1.81
C11orf49-201ENST00000278460 SLC26A8Q96RN1 970 aa26.37■■□□□ 1.81
C11orf49-201ENST00000278460 ROBO2Q9HCK4 1378 aa26.37■■□□□ 1.81
C11orf49-201ENST00000278460 HNRNPUQ00839 825 aaKnown RBP eCLIP26.36■■□□□ 1.81
C11orf49-201ENST00000278460 PIK3R4Q99570 1358 aa26.34■■□□□ 1.81
C11orf49-201ENST00000278460 CHD2O14647 1828 aaKnown RBP26.34■■□□□ 1.81
C11orf49-201ENST00000278460 PTCH1Q13635 1447 aa26.34■■□□□ 1.81
C11orf49-201ENST00000278460 ANKLE2Q86XL3 938 aa26.34■■□□□ 1.81
C11orf49-201ENST00000278460 ANKRD26Q9UPS8 1709 aa26.33■■□□□ 1.81
C11orf49-201ENST00000278460 WASLO00401 505 aaPredicted RBP26.32■■□□□ 1.8
C11orf49-201ENST00000278460 PPP2R1AP30153 589 aa26.32■■□□□ 1.8
C11orf49-201ENST00000278460 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
C11orf49-201ENST00000278460 A0A1W2PP64 1363 aa26.31■■□□□ 1.8
C11orf49-201ENST00000278460 ATP7BP35670 1465 aa26.3■■□□□ 1.8
C11orf49-201ENST00000278460 NSD2O96028 1365 aa26.29■■□□□ 1.8
C11orf49-201ENST00000278460 TERF2IPQ9NYB0 399 aa26.29■■□□□ 1.8
C11orf49-201ENST00000278460 AMOTL2Q9Y2J4 779 aa26.29■■□□□ 1.8
C11orf49-201ENST00000278460 KIF20BQ96Q89 1820 aa26.29■■□□□ 1.8
C11orf49-201ENST00000278460 CGNL1Q0VF96 1302 aa26.29■■□□□ 1.8
C11orf49-201ENST00000278460 ITSN1Q15811 1721 aa26.27■■□□□ 1.8
C11orf49-201ENST00000278460 AKAP12Q02952 1782 aa26.27■■□□□ 1.8
C11orf49-201ENST00000278460 TOPAZ1Q8N9V7 1692 aa26.26■■□□□ 1.79
C11orf49-201ENST00000278460 INSRP06213 1382 aa26.25■■□□□ 1.79
C11orf49-201ENST00000278460 MON2Q7Z3U7 1717 aa26.24■■□□□ 1.79
C11orf49-201ENST00000278460 HDGFL2Q7Z4V5 671 aaPredicted RBP26.24■■□□□ 1.79
C11orf49-201ENST00000278460 ZBED9Q6R2W3 1325 aa26.23■■□□□ 1.79
C11orf49-201ENST00000278460 CABP1Q9NZU7 370 aa26.22■■□□□ 1.79
C11orf49-201ENST00000278460 CDC42BPGQ6DT37 1551 aa26.22■■□□□ 1.79
C11orf49-201ENST00000278460 NPHP4O75161 1426 aaPredicted RBP26.21■■□□□ 1.79
C11orf49-201ENST00000278460 PPIP5K1Q6PFW1 1433 aa26.21■■□□□ 1.79
C11orf49-201ENST00000278460 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.78
C11orf49-201ENST00000278460 MORC1Q86VD1 984 aa26.2■■□□□ 1.78
C11orf49-201ENST00000278460 NUDT16Q96DE0 195 aaKnown RBP26.2■■□□□ 1.78
C11orf49-201ENST00000278460 CPSF1Q10570 1443 aaKnown RBP26.18■■□□□ 1.78
C11orf49-201ENST00000278460 CCDC61Q9Y6R9 512 aa26.17■■□□□ 1.78
C11orf49-201ENST00000278460 GTF3C3Q9Y5Q9 886 aa26.17■■□□□ 1.78
C11orf49-201ENST00000278460 RGPD8O14715 1765 aaPredicted RBP26.16■■□□□ 1.78
C11orf49-201ENST00000278460 KCNA6P17658 529 aa26.14■■□□□ 1.78
C11orf49-201ENST00000278460 BLMP54132 1417 aaPredicted RBP26.14■■□□□ 1.78
C11orf49-201ENST00000278460 PRR36Q9H6K5 1346 aa26.14■■□□□ 1.77
C11orf49-201ENST00000278460 FMN2Q9NZ56 1722 aa26.14■■□□□ 1.77
C11orf49-201ENST00000278460 POLR3AO14802 1390 aaPredicted RBP26.13■■□□□ 1.77
C11orf49-201ENST00000278460 NALCNQ8IZF0 1738 aa26.13■■□□□ 1.77
C11orf49-201ENST00000278460 EDC4Q6P2E9 1401 aaKnown RBP26.12■■□□□ 1.77
C11orf49-201ENST00000278460 NWD1Q149M9 1564 aa26.12■■□□□ 1.77
C11orf49-201ENST00000278460 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
C11orf49-201ENST00000278460 FYB1O15117 783 aa26.1■■□□□ 1.77
C11orf49-201ENST00000278460 NRKQ7Z2Y5 1582 aa26.09■■□□□ 1.77
C11orf49-201ENST00000278460 NCKAP5LQ9HCH0 1330 aa26.09■■□□□ 1.77
C11orf49-201ENST00000278460 WDR43Q15061 677 aaKnown RBP eCLIP26.08■■□□□ 1.77
C11orf49-201ENST00000278460 ZNF692Q9BU19 519 aaPredicted RBP26.07■■□□□ 1.76
C11orf49-201ENST00000278460 ANKARQ7Z5J8 1434 aa26.06■■□□□ 1.76
C11orf49-201ENST00000278460 PLEKHG3A1L390 1219 aa26.06■■□□□ 1.76
C11orf49-201ENST00000278460 GGNBP2Q9H3C7 697 aa26.06■■□□□ 1.76
C11orf49-201ENST00000278460 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
C11orf49-201ENST00000278460 MAP2P11137 1827 aaKnown RBP26.04■■□□□ 1.76
C11orf49-201ENST00000278460 KDM4FA0A1W2PPD8 638 aa26.04■■□□□ 1.76
C11orf49-201ENST00000278460 ADAMTS8Q9UP79 889 aa26.04■■□□□ 1.76
C11orf49-201ENST00000278460 TNNT2P45379 298 aaPredicted RBP26.03■■□□□ 1.76
C11orf49-201ENST00000278460 MTHFSP49914 203 aa26■■□□□ 1.75
C11orf49-201ENST00000278460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.99■■□□□ 1.75
C11orf49-201ENST00000278460 ADGRL3Q9HAR2 1447 aa25.99■■□□□ 1.75
C11orf49-201ENST00000278460 ACEP12821 1306 aa25.99■■□□□ 1.75
C11orf49-201ENST00000278460 CFAP53Q96M91 514 aa25.99■■□□□ 1.75
C11orf49-201ENST00000278460 USP6P35125 1406 aa25.97■■□□□ 1.75
C11orf49-201ENST00000278460 NUTM2FA1L443 756 aa25.97■■□□□ 1.75
C11orf49-201ENST00000278460 SMG6Q86US8 1419 aaKnown RBP25.95■■□□□ 1.75
C11orf49-201ENST00000278460 LMTK3Q96Q04 1460 aa25.95■■□□□ 1.74
C11orf49-201ENST00000278460 STRCP1A6NGW2 1772 aa25.94■■□□□ 1.74
C11orf49-201ENST00000278460 COL3A1P02461 1466 aaPredicted RBP25.94■■□□□ 1.74
C11orf49-201ENST00000278460 SSH2Q76I76 1423 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms