RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
SSRP1-201ENST00000278412 SLIT1O75093 1534 aa16.04■□□□□ 0.16
SSRP1-201ENST00000278412 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
SSRP1-201ENST00000278412 HSPA2P54652 639 aa16.02■□□□□ 0.15
SSRP1-201ENST00000278412 CDK19Q9BWU1 502 aa16.02■□□□□ 0.15
SSRP1-201ENST00000278412 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
SSRP1-201ENST00000278412 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
SSRP1-201ENST00000278412 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
SSRP1-201ENST00000278412 ABCC11Q96J66 1382 aa16■□□□□ 0.15
SSRP1-201ENST00000278412 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
SSRP1-201ENST00000278412 MED14O60244 1454 aa16■□□□□ 0.15
SSRP1-201ENST00000278412 CDCA8Q53HL2 280 aa16■□□□□ 0.15
SSRP1-201ENST00000278412 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
SSRP1-201ENST00000278412 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
SSRP1-201ENST00000278412 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
SSRP1-201ENST00000278412 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
SSRP1-201ENST00000278412 PARD3Q8TEW0 1356 aa15.97■□□□□ 0.15
SSRP1-201ENST00000278412 KCNA6P17658 529 aa15.97■□□□□ 0.15
SSRP1-201ENST00000278412 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
SSRP1-201ENST00000278412 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
SSRP1-201ENST00000278412 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.14
SSRP1-201ENST00000278412 ANKLE2Q86XL3 938 aa15.95■□□□□ 0.14
SSRP1-201ENST00000278412 ZNF142P52746 1687 aaPredicted RBP15.95■□□□□ 0.14
SSRP1-201ENST00000278412 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
SSRP1-201ENST00000278412 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
SSRP1-201ENST00000278412 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
SSRP1-201ENST00000278412 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
SSRP1-201ENST00000278412 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
SSRP1-201ENST00000278412 TBX22Q9Y458 520 aa15.93■□□□□ 0.14
SSRP1-201ENST00000278412 CD163L1Q9NR16 1453 aa15.93■□□□□ 0.14
SSRP1-201ENST00000278412 WASLO00401 505 aaPredicted RBP15.92■□□□□ 0.14
SSRP1-201ENST00000278412 TECPR2O15040 1411 aa15.92■□□□□ 0.14
SSRP1-201ENST00000278412 CPS1P31327 1500 aa15.92■□□□□ 0.14
SSRP1-201ENST00000278412 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
SSRP1-201ENST00000278412 FBLN1P23142 703 aa15.92■□□□□ 0.14
SSRP1-201ENST00000278412 RALBP1Q15311 655 aa15.9■□□□□ 0.14
SSRP1-201ENST00000278412 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
SSRP1-201ENST00000278412 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
SSRP1-201ENST00000278412 KNDC1Q76NI1 1749 aa15.9■□□□□ 0.14
SSRP1-201ENST00000278412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSRP1-201ENST00000278412 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
SSRP1-201ENST00000278412 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
SSRP1-201ENST00000278412 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
SSRP1-201ENST00000278412 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
SSRP1-201ENST00000278412 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
SSRP1-201ENST00000278412 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
SSRP1-201ENST00000278412 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
SSRP1-201ENST00000278412 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-201ENST00000278412 PPIP5K1Q6PFW1 1433 aa15.86■□□□□ 0.13
SSRP1-201ENST00000278412 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
SSRP1-201ENST00000278412 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
SSRP1-201ENST00000278412 PMFBP1Q8TBY8 1022 aa15.85■□□□□ 0.13
SSRP1-201ENST00000278412 ATAD2Q6PL18 1390 aa15.85■□□□□ 0.13
SSRP1-201ENST00000278412 RGPD8O14715 1765 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-201ENST00000278412 ATP7BP35670 1465 aa15.84■□□□□ 0.13
SSRP1-201ENST00000278412 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.12
SSRP1-201ENST00000278412 FYB1O15117 783 aa15.83■□□□□ 0.12
SSRP1-201ENST00000278412 MORC1Q86VD1 984 aa15.83■□□□□ 0.12
SSRP1-201ENST00000278412 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
SSRP1-201ENST00000278412 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
SSRP1-201ENST00000278412 SIRT1Q96EB6 747 aa15.82■□□□□ 0.12
SSRP1-201ENST00000278412 NME9Q86XW9 330 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 PUS7Q96PZ0 661 aaKnown RBP15.81■□□□□ 0.12
SSRP1-201ENST00000278412 CGNL1Q0VF96 1302 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 USP32Q8NFA0 1604 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
SSRP1-201ENST00000278412 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
SSRP1-201ENST00000278412 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
SSRP1-201ENST00000278412 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
SSRP1-201ENST00000278412 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
SSRP1-201ENST00000278412 HDGFL2Q7Z4V5 671 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-201ENST00000278412 ACEP12821 1306 aa15.78■□□□□ 0.12
SSRP1-201ENST00000278412 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
SSRP1-201ENST00000278412 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
SSRP1-201ENST00000278412 MTHFSP49914 203 aa15.77■□□□□ 0.12
SSRP1-201ENST00000278412 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.11
SSRP1-201ENST00000278412 STRCP1A6NGW2 1772 aa15.77■□□□□ 0.11
SSRP1-201ENST00000278412 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
SSRP1-201ENST00000278412 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.11
SSRP1-201ENST00000278412 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
SSRP1-201ENST00000278412 SOX12O15370 315 aa15.76■□□□□ 0.11
SSRP1-201ENST00000278412 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
SSRP1-201ENST00000278412 NUTM2GQ5VZR2 741 aa15.74■□□□□ 0.11
SSRP1-201ENST00000278412 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
SSRP1-201ENST00000278412 PIK3R4Q99570 1358 aa15.74■□□□□ 0.11
SSRP1-201ENST00000278412 NINLQ9Y2I6 1382 aa15.74■□□□□ 0.11
SSRP1-201ENST00000278412 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
SSRP1-201ENST00000278412 STRCQ7RTU9 1775 aa15.73■□□□□ 0.11
SSRP1-201ENST00000278412 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
SSRP1-201ENST00000278412 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
SSRP1-201ENST00000278412 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
SSRP1-201ENST00000278412 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
SSRP1-201ENST00000278412 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.1
SSRP1-201ENST00000278412 NGDNQ8NEJ9 315 aaKnown RBP15.7■□□□□ 0.1
SSRP1-201ENST00000278412 DDX17Q92841 729 aaKnown RBP15.7■□□□□ 0.1
SSRP1-201ENST00000278412 EMILIN1Q9Y6C2 1016 aa15.7■□□□□ 0.1
SSRP1-201ENST00000278412 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
SSRP1-201ENST00000278412 KIF20BQ96Q89 1820 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms