RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 KANK1Q14678 1352 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
CD164-201ENST00000275080 UGGT1Q9NYU2 1555 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 PTPRTO14522 1441 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 EXOSC9Q06265 439 aaKnown RBP11.65□□□□□ -0.54
CD164-201ENST00000275080 BECN1Q14457 450 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 C1orf115Q9H7X2 142 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 FANCAO15360 1455 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.64□□□□□ -0.55
CD164-201ENST00000275080 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
CD164-201ENST00000275080 NSD3Q9BZ95 1437 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 APBB1O00213 710 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
CD164-201ENST00000275080 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
CD164-201ENST00000275080 NEURL4Q96JN8 1562 aa11.63□□□□□ -0.55
CD164-201ENST00000275080 INSRP06213 1382 aa11.63□□□□□ -0.55
CD164-201ENST00000275080 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
CD164-201ENST00000275080 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
CD164-201ENST00000275080 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
CD164-201ENST00000275080 CFAP53Q96M91 514 aa11.62□□□□□ -0.55
CD164-201ENST00000275080 PANK2Q9BZ23 570 aa11.62□□□□□ -0.55
CD164-201ENST00000275080 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
CD164-201ENST00000275080 SCAF11Q99590 1463 aaKnown RBP11.61□□□□□ -0.55
CD164-201ENST00000275080 SOX12O15370 315 aa11.61□□□□□ -0.55
CD164-201ENST00000275080 HMOX1P09601 288 aa11.61□□□□□ -0.55
CD164-201ENST00000275080 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
CD164-201ENST00000275080 CLTCL1P53675 1640 aa11.61□□□□□ -0.55
CD164-201ENST00000275080 HSP90AA1P07900 732 aaKnown RBP11.61□□□□□ -0.55
CD164-201ENST00000275080 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
CD164-201ENST00000275080 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
CD164-201ENST00000275080 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
CD164-201ENST00000275080 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
CD164-201ENST00000275080 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
CD164-201ENST00000275080 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
CD164-201ENST00000275080 KIAA1210Q9ULL0 1709 aa11.59□□□□□ -0.55
CD164-201ENST00000275080 RAPGEF3O95398 923 aa11.59□□□□□ -0.55
CD164-201ENST00000275080 PMFBP1Q8TBY8 1022 aa11.59□□□□□ -0.55
CD164-201ENST00000275080 TRIM27P14373 513 aa11.58□□□□□ -0.55
CD164-201ENST00000275080 RIPK4P57078 832 aa11.58□□□□□ -0.55
CD164-201ENST00000275080 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.55
CD164-201ENST00000275080 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 NOS1P29475 1434 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 ASXL2Q76L83 1435 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 PLPPR3Q6T4P5 718 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 C22orf23Q9BZE7 217 aa11.58□□□□□ -0.56
CD164-201ENST00000275080 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
CD164-201ENST00000275080 SYNMO15061 1565 aa11.57□□□□□ -0.56
CD164-201ENST00000275080 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
CD164-201ENST00000275080 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
CD164-201ENST00000275080 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
CD164-201ENST00000275080 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
CD164-201ENST00000275080 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
CD164-201ENST00000275080 MYOM2P54296 1465 aa11.56□□□□□ -0.56
CD164-201ENST00000275080 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
CD164-201ENST00000275080 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
CD164-201ENST00000275080 ZNF518AQ6AHZ1 1483 aa11.55□□□□□ -0.56
CD164-201ENST00000275080 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
CD164-201ENST00000275080 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
CD164-201ENST00000275080 LMTK2Q8IWU2 1503 aa11.54□□□□□ -0.56
CD164-201ENST00000275080 MLECQ14165 292 aa11.54□□□□□ -0.56
CD164-201ENST00000275080 RRAGDQ9NQL2 400 aaPredicted RBP11.54□□□□□ -0.56
CD164-201ENST00000275080 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
CD164-201ENST00000275080 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
CD164-201ENST00000275080 PIK3C2GO75747 1445 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
CD164-201ENST00000275080 NAP1L5Q96NT1 182 aaPredicted RBP11.53□□□□□ -0.56
CD164-201ENST00000275080 KIF1BO60333 1816 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 DCTN1Q14203 1278 aa11.53□□□□□ -0.56
CD164-201ENST00000275080 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
CD164-201ENST00000275080 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
CD164-201ENST00000275080 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
CD164-201ENST00000275080 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
CD164-201ENST00000275080 PRAM1Q96QH2 718 aa11.52□□□□□ -0.57
CD164-201ENST00000275080 ATAD2Q6PL18 1390 aa11.52□□□□□ -0.57
CD164-201ENST00000275080 GOLGA6L3A6NEY3 463 aa11.52□□□□□ -0.57
CD164-201ENST00000275080 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
CD164-201ENST00000275080 XRCC6P12956 609 aaKnown RBP eCLIP11.52□□□□□ -0.57
CD164-201ENST00000275080 CABP1Q9NZU7 370 aa11.52□□□□□ -0.57
CD164-201ENST00000275080 NPC1L1Q9UHC9 1359 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 KDM5AP29375 1690 aaKnown RBP11.51□□□□□ -0.57
CD164-201ENST00000275080 TRAK2O60296 914 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 NCLP19338 710 aaKnown RBP11.51□□□□□ -0.57
CD164-201ENST00000275080 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 IFT172Q9UG01 1749 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 TSPYL6Q8N831 410 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
CD164-201ENST00000275080 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
CD164-201ENST00000275080 PRKAR2BP31323 418 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms