RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 FAM135BQ49AJ0 1406 aa19.85■□□□□ 0.77
TRIM23-202ENST00000274327 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
TRIM23-202ENST00000274327 BCANQ96GW7 911 aa19.84■□□□□ 0.77
TRIM23-202ENST00000274327 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.76
TRIM23-202ENST00000274327 NPC1L1Q9UHC9 1359 aa19.82■□□□□ 0.76
TRIM23-202ENST00000274327 TBX22Q9Y458 520 aa19.82■□□□□ 0.76
TRIM23-202ENST00000274327 MINK1Q8N4C8 1332 aaPredicted RBP19.81■□□□□ 0.76
TRIM23-202ENST00000274327 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
TRIM23-202ENST00000274327 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
TRIM23-202ENST00000274327 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
TRIM23-202ENST00000274327 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
TRIM23-202ENST00000274327 PTPRUQ92729 1446 aa19.8■□□□□ 0.76
TRIM23-202ENST00000274327 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
TRIM23-202ENST00000274327 MRS2Q9HD23 443 aa19.8■□□□□ 0.76
TRIM23-202ENST00000274327 CABP2Q9NPB3 220 aa19.79■□□□□ 0.76
TRIM23-202ENST00000274327 ATAD2Q6PL18 1390 aa19.78■□□□□ 0.76
TRIM23-202ENST00000274327 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
TRIM23-202ENST00000274327 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
TRIM23-202ENST00000274327 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
TRIM23-202ENST00000274327 SLC12A5Q9H2X9 1139 aa19.78■□□□□ 0.76
TRIM23-202ENST00000274327 USP32Q8NFA0 1604 aa19.77■□□□□ 0.76
TRIM23-202ENST00000274327 BRD4O60885 1362 aaPredicted RBP19.77■□□□□ 0.76
TRIM23-202ENST00000274327 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.76
TRIM23-202ENST00000274327 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.75
TRIM23-202ENST00000274327 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
TRIM23-202ENST00000274327 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
TRIM23-202ENST00000274327 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
TRIM23-202ENST00000274327 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
TRIM23-202ENST00000274327 SRPK2P78362 688 aaKnown RBP19.75■□□□□ 0.75
TRIM23-202ENST00000274327 ANKLE2Q86XL3 938 aa19.75■□□□□ 0.75
TRIM23-202ENST00000274327 ADGRB2O60241 1585 aa19.75■□□□□ 0.75
TRIM23-202ENST00000274327 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
TRIM23-202ENST00000274327 PIK3R4Q99570 1358 aa19.74■□□□□ 0.75
TRIM23-202ENST00000274327 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.74■□□□□ 0.75
TRIM23-202ENST00000274327 NLRP13Q86W25 1043 aa19.73■□□□□ 0.75
TRIM23-202ENST00000274327 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
TRIM23-202ENST00000274327 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
TRIM23-202ENST00000274327 WASLO00401 505 aaPredicted RBP19.71■□□□□ 0.75
TRIM23-202ENST00000274327 AMOTL2Q9Y2J4 779 aa19.71■□□□□ 0.75
TRIM23-202ENST00000274327 CD163L1Q9NR16 1453 aa19.71■□□□□ 0.75
TRIM23-202ENST00000274327 CHD2O14647 1828 aaKnown RBP19.7■□□□□ 0.74
TRIM23-202ENST00000274327 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
TRIM23-202ENST00000274327 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
TRIM23-202ENST00000274327 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
TRIM23-202ENST00000274327 NPHP4O75161 1426 aaPredicted RBP19.67■□□□□ 0.74
TRIM23-202ENST00000274327 ATP7BP35670 1465 aa19.66■□□□□ 0.74
TRIM23-202ENST00000274327 MYT1Q01538 1121 aa19.66■□□□□ 0.74
TRIM23-202ENST00000274327 PPP2R1AP30153 589 aa19.65■□□□□ 0.74
TRIM23-202ENST00000274327 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
TRIM23-202ENST00000274327 NSD2O96028 1365 aa19.64■□□□□ 0.73
TRIM23-202ENST00000274327 CABP1Q9NZU7 370 aa19.63■□□□□ 0.73
TRIM23-202ENST00000274327 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
TRIM23-202ENST00000274327 TOPAZ1Q8N9V7 1692 aa19.63■□□□□ 0.73
TRIM23-202ENST00000274327 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
TRIM23-202ENST00000274327 ANKRD26Q9UPS8 1709 aa19.62■□□□□ 0.73
TRIM23-202ENST00000274327 KCNA6P17658 529 aa19.61■□□□□ 0.73
TRIM23-202ENST00000274327 HNRNPUQ00839 825 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM23-202ENST00000274327 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
TRIM23-202ENST00000274327 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
TRIM23-202ENST00000274327 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
TRIM23-202ENST00000274327 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
TRIM23-202ENST00000274327 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
TRIM23-202ENST00000274327 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
TRIM23-202ENST00000274327 PRR36Q9H6K5 1346 aa19.6■□□□□ 0.73
TRIM23-202ENST00000274327 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
TRIM23-202ENST00000274327 KIF20BQ96Q89 1820 aa19.59■□□□□ 0.73
TRIM23-202ENST00000274327 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
TRIM23-202ENST00000274327 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
TRIM23-202ENST00000274327 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
TRIM23-202ENST00000274327 INSRP06213 1382 aa19.58■□□□□ 0.72
TRIM23-202ENST00000274327 ITSN1Q15811 1721 aa19.58■□□□□ 0.72
TRIM23-202ENST00000274327 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
TRIM23-202ENST00000274327 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
TRIM23-202ENST00000274327 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
TRIM23-202ENST00000274327 ZBED9Q6R2W3 1325 aa19.54■□□□□ 0.72
TRIM23-202ENST00000274327 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
TRIM23-202ENST00000274327 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
TRIM23-202ENST00000274327 FYB1O15117 783 aa19.53■□□□□ 0.72
TRIM23-202ENST00000274327 RGPD8O14715 1765 aaPredicted RBP19.52■□□□□ 0.71
TRIM23-202ENST00000274327 POLR3AO14802 1390 aaPredicted RBP19.51■□□□□ 0.71
TRIM23-202ENST00000274327 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
TRIM23-202ENST00000274327 ANKARQ7Z5J8 1434 aa19.51■□□□□ 0.71
TRIM23-202ENST00000274327 LMTK3Q96Q04 1460 aa19.51■□□□□ 0.71
TRIM23-202ENST00000274327 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
TRIM23-202ENST00000274327 NRKQ7Z2Y5 1582 aa19.5■□□□□ 0.71
TRIM23-202ENST00000274327 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
TRIM23-202ENST00000274327 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
TRIM23-202ENST00000274327 ADGRL3Q9HAR2 1447 aa19.48■□□□□ 0.71
TRIM23-202ENST00000274327 SHPRHQ149N8 1683 aa19.46■□□□□ 0.71
TRIM23-202ENST00000274327 ACEP12821 1306 aa19.46■□□□□ 0.71
TRIM23-202ENST00000274327 STRCQ7RTU9 1775 aa19.45■□□□□ 0.7
TRIM23-202ENST00000274327 NUTM2FA1L443 756 aa19.45■□□□□ 0.7
TRIM23-202ENST00000274327 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
TRIM23-202ENST00000274327 HSPA2P54652 639 aa19.45■□□□□ 0.7
TRIM23-202ENST00000274327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRIM23-202ENST00000274327 ADAMTS8Q9UP79 889 aa19.44■□□□□ 0.7
TRIM23-202ENST00000274327 USP6P35125 1406 aa19.44■□□□□ 0.7
TRIM23-202ENST00000274327 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
TRIM23-202ENST00000274327 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRIM23-202ENST00000274327 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms