RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 CHMP3Q9Y3E7 222 aa19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 RBSNQ9H1K0 784 aa19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 CHD1LQ86WJ1 897 aa19.62■□□□□ 0.73
PRPF40B-201ENST00000261897 PLEKHH2Q8IVE3 1493 aa19.61■□□□□ 0.73
PRPF40B-201ENST00000261897 PKP1Q13835 747 aa19.61■□□□□ 0.73
PRPF40B-201ENST00000261897 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
PRPF40B-201ENST00000261897 RIPK4P57078 832 aa19.61■□□□□ 0.73
PRPF40B-201ENST00000261897 ZSCAN23Q3MJ62 389 aa19.61■□□□□ 0.73
PRPF40B-201ENST00000261897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-201ENST00000261897 PTMSP20962 102 aa19.6■□□□□ 0.73
PRPF40B-201ENST00000261897 ATF7IPQ6VMQ6 1270 aa19.6■□□□□ 0.73
PRPF40B-201ENST00000261897 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-201ENST00000261897 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-201ENST00000261897 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
PRPF40B-201ENST00000261897 THUMPD2Q9BTF0 503 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-201ENST00000261897 GGNBP2Q9H3C7 697 aa19.59■□□□□ 0.73
PRPF40B-201ENST00000261897 DTNBO60941 627 aa19.58■□□□□ 0.73
PRPF40B-201ENST00000261897 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.73
PRPF40B-201ENST00000261897 SRPK2P78362 688 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 MAP7D2Q96T17 732 aa19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 CASC1Q6TDU7 716 aa19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 ZNF771Q7L3S4 317 aaPredicted RBP19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 CARD14Q9BXL6 1004 aa19.57■□□□□ 0.72
PRPF40B-201ENST00000261897 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
PRPF40B-201ENST00000261897 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
PRPF40B-201ENST00000261897 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 ST18O60284 1047 aa19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 CSPP1Q1MSJ5 1256 aa19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 KLHL40Q2TBA0 621 aa19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 CIZ1Q9ULV3 898 aaPredicted RBP19.55■□□□□ 0.72
PRPF40B-201ENST00000261897 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
PRPF40B-201ENST00000261897 DRC7Q8IY82 874 aa19.54■□□□□ 0.72
PRPF40B-201ENST00000261897 KIF14Q15058 1648 aa19.54■□□□□ 0.72
PRPF40B-201ENST00000261897 KIF16BQ96L93 1317 aa19.54■□□□□ 0.72
PRPF40B-201ENST00000261897 NUCB2P80303 420 aa19.53■□□□□ 0.72
PRPF40B-201ENST00000261897 CCDC39Q9UFE4 941 aa19.53■□□□□ 0.72
PRPF40B-201ENST00000261897 HMOX1P09601 288 aa19.53■□□□□ 0.72
PRPF40B-201ENST00000261897 NEK4P51957 841 aa19.52■□□□□ 0.72
PRPF40B-201ENST00000261897 TTC12Q9H892 705 aaPredicted RBP19.52■□□□□ 0.72
PRPF40B-201ENST00000261897 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.72
PRPF40B-201ENST00000261897 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.72
PRPF40B-201ENST00000261897 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 TRMT2AQ8IZ69 625 aaKnown RBP19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 USP25Q9UHP3 1055 aa19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 PPP4R3BQ5MIZ7 849 aa19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 SOX12O15370 315 aa19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 CDC45O75419 566 aa19.51■□□□□ 0.71
PRPF40B-201ENST00000261897 MAGI2Q86UL8 1455 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 KIF3BO15066 747 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 SMARCA5O60264 1052 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 SLC4A10Q6U841 1118 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 ZNF592Q92610 1267 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 TRIM6-TRIM34B2RNG4 842 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 ZKSCAN5Q9Y2L8 839 aa19.5■□□□□ 0.71
PRPF40B-201ENST00000261897 SASS6Q6UVJ0 657 aa19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 LARP6Q9BRS8 491 aaKnown RBP19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 FBLN1P23142 703 aa19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 RILPL2Q969X0 211 aa19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
PRPF40B-201ENST00000261897 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 BBXQ8WY36 941 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
PRPF40B-201ENST00000261897 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
PRPF40B-201ENST00000261897 NPHP1O15259 732 aa19.46■□□□□ 0.71
PRPF40B-201ENST00000261897 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-201ENST00000261897 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-201ENST00000261897 TSHZ3Q63HK5 1081 aa19.46■□□□□ 0.71
PRPF40B-201ENST00000261897 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
PRPF40B-201ENST00000261897 TSPY26PQ9H489 355 aa19.45■□□□□ 0.7
PRPF40B-201ENST00000261897 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
PRPF40B-201ENST00000261897 UPF3BQ9BZI7 483 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-201ENST00000261897 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
PRPF40B-201ENST00000261897 TRERF1Q96PN7 1200 aa19.45■□□□□ 0.7
PRPF40B-201ENST00000261897 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
PRPF40B-201ENST00000261897 VGLL3A8MV65 326 aa19.44■□□□□ 0.7
PRPF40B-201ENST00000261897 ANO2Q9NQ90 1003 aa19.44■□□□□ 0.7
PRPF40B-201ENST00000261897 NOL7Q9UMY1 257 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-201ENST00000261897 DYNC1I1O14576 645 aa19.44■□□□□ 0.7
PRPF40B-201ENST00000261897 AAMPQ13685 434 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 NUCB1Q02818 461 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 RABEP1Q15276 862 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms