RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ABCC11Q96J66 1382 aa31.76■■■□□ 2.68
SYNGR3-201ENST00000248121 MINK1Q8N4C8 1332 aaPredicted RBP31.76■■■□□ 2.67
SYNGR3-201ENST00000248121 POGKQ9P215 609 aa31.75■■■□□ 2.67
SYNGR3-201ENST00000248121 CPS1P31327 1500 aa31.74■■■□□ 2.67
SYNGR3-201ENST00000248121 PTPRUQ92729 1446 aa31.74■■■□□ 2.67
SYNGR3-201ENST00000248121 TECPR2O15040 1411 aa31.72■■■□□ 2.67
SYNGR3-201ENST00000248121 BRD4O60885 1362 aaPredicted RBP31.71■■■□□ 2.67
SYNGR3-201ENST00000248121 SLC24A1O60721 1099 aa31.7■■■□□ 2.67
SYNGR3-201ENST00000248121 PNISRQ8TF01 805 aaKnown RBP31.7■■■□□ 2.67
SYNGR3-201ENST00000248121 CABP2Q9NPB3 220 aa31.69■■■□□ 2.66
SYNGR3-201ENST00000248121 EVC2Q86UK5 1308 aa31.69■■■□□ 2.66
SYNGR3-201ENST00000248121 DIP2AQ14689 1571 aa31.68■■■□□ 2.66
SYNGR3-201ENST00000248121 CC2D1BQ5T0F9 858 aaKnown RBP31.68■■■□□ 2.66
SYNGR3-201ENST00000248121 TMC1Q8TDI8 760 aa31.68■■■□□ 2.66
SYNGR3-201ENST00000248121 ROBO2Q9HCK4 1378 aa31.67■■■□□ 2.66
SYNGR3-201ENST00000248121 KDM4FA0A1W2PPD8 638 aa31.66■■■□□ 2.66
SYNGR3-201ENST00000248121 SLC12A5Q9H2X9 1139 aa31.63■■■□□ 2.65
SYNGR3-201ENST00000248121 NLRP13Q86W25 1043 aa31.63■■■□□ 2.65
SYNGR3-201ENST00000248121 ZBED9Q6R2W3 1325 aa31.62■■■□□ 2.65
SYNGR3-201ENST00000248121 TBX22Q9Y458 520 aa31.62■■■□□ 2.65
SYNGR3-201ENST00000248121 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.62■■■□□ 2.65
SYNGR3-201ENST00000248121 FAM135BQ49AJ0 1406 aa31.62■■■□□ 2.65
SYNGR3-201ENST00000248121 XRN1Q8IZH2 1706 aaKnown RBP31.61■■■□□ 2.65
SYNGR3-201ENST00000248121 ANKLE2Q86XL3 938 aa31.61■■■□□ 2.65
SYNGR3-201ENST00000248121 SUPT16HQ9Y5B9 1047 aaKnown RBP31.61■■■□□ 2.65
SYNGR3-201ENST00000248121 SRPK2P78362 688 aaKnown RBP31.6■■■□□ 2.65
SYNGR3-201ENST00000248121 AMER1Q5JTC6 1135 aaPredicted RBP31.6■■■□□ 2.65
SYNGR3-201ENST00000248121 CARD14Q9BXL6 1004 aa31.6■■■□□ 2.65
SYNGR3-201ENST00000248121 KNSTRNQ9Y448 316 aa31.58■■■□□ 2.65
SYNGR3-201ENST00000248121 CDK19Q9BWU1 502 aa31.56■■■□□ 2.64
SYNGR3-201ENST00000248121 AMOTL2Q9Y2J4 779 aa31.56■■■□□ 2.64
SYNGR3-201ENST00000248121 SIRT1Q96EB6 747 aa31.53■■■□□ 2.64
SYNGR3-201ENST00000248121 CHD2O14647 1828 aaKnown RBP31.53■■■□□ 2.64
SYNGR3-201ENST00000248121 PUS7Q96PZ0 661 aaKnown RBP31.53■■■□□ 2.64
SYNGR3-201ENST00000248121 NCKAP5LQ9HCH0 1330 aa31.53■■■□□ 2.64
SYNGR3-201ENST00000248121 NPHP4O75161 1426 aaPredicted RBP31.51■■■□□ 2.63
SYNGR3-201ENST00000248121 NPC1L1Q9UHC9 1359 aa31.5■■■□□ 2.63
SYNGR3-201ENST00000248121 NSD3Q9BZ95 1437 aa31.5■■■□□ 2.63
SYNGR3-201ENST00000248121 PTCH1Q13635 1447 aa31.5■■■□□ 2.63
SYNGR3-201ENST00000248121 ADGRB2O60241 1585 aa31.49■■■□□ 2.63
SYNGR3-201ENST00000248121 CD163L1Q9NR16 1453 aa31.49■■■□□ 2.63
SYNGR3-201ENST00000248121 ATAD2Q6PL18 1390 aa31.49■■■□□ 2.63
SYNGR3-201ENST00000248121 KCNA6P17658 529 aa31.47■■■□□ 2.63
SYNGR3-201ENST00000248121 WASLO00401 505 aaPredicted RBP31.47■■■□□ 2.63
SYNGR3-201ENST00000248121 A0A1W2PP64 1363 aa31.46■■■□□ 2.63
SYNGR3-201ENST00000248121 ANKRD36BQ8N2N9 1353 aa31.46■■■□□ 2.63
SYNGR3-201ENST00000248121 HSPA2P54652 639 aa31.43■■■□□ 2.62
SYNGR3-201ENST00000248121 PIK3R4Q99570 1358 aa31.43■■■□□ 2.62
SYNGR3-201ENST00000248121 USP32Q8NFA0 1604 aa31.42■■■□□ 2.62
SYNGR3-201ENST00000248121 PPP2R1AP30153 589 aa31.42■■■□□ 2.62
SYNGR3-201ENST00000248121 FKBP8Q14318 412 aa31.41■■■□□ 2.62
SYNGR3-201ENST00000248121 CABP1Q9NZU7 370 aa31.4■■■□□ 2.62
SYNGR3-201ENST00000248121 ATP7BP35670 1465 aa31.4■■■□□ 2.62
SYNGR3-201ENST00000248121 NINLQ9Y2I6 1382 aa31.4■■■□□ 2.62
SYNGR3-201ENST00000248121 PRR36Q9H6K5 1346 aa31.39■■■□□ 2.62
SYNGR3-201ENST00000248121 LMTK3Q96Q04 1460 aa31.39■■■□□ 2.62
SYNGR3-201ENST00000248121 SENP3-EIF4A1A0A087X0R7 540 aa31.39■■■□□ 2.62
SYNGR3-201ENST00000248121 TOPAZ1Q8N9V7 1692 aa31.37■■■□□ 2.61
SYNGR3-201ENST00000248121 NALCNQ8IZF0 1738 aa31.36■■■□□ 2.61
SYNGR3-201ENST00000248121 PPIP5K1Q6PFW1 1433 aa31.35■■■□□ 2.61
SYNGR3-201ENST00000248121 RGPD8O14715 1765 aaPredicted RBP31.35■■■□□ 2.61
SYNGR3-201ENST00000248121 NUTM2FA1L443 756 aa31.35■■■□□ 2.61
SYNGR3-201ENST00000248121 RBM33Q96EV2 1170 aaKnown RBP31.35■■■□□ 2.61
SYNGR3-201ENST00000248121 NUDT16Q96DE0 195 aaKnown RBP31.34■■■□□ 2.61
SYNGR3-201ENST00000248121 INSRP06213 1382 aa31.31■■■□□ 2.6
SYNGR3-201ENST00000248121 NEFLP07196 543 aa31.31■■■□□ 2.6
SYNGR3-201ENST00000248121 NWD1Q149M9 1564 aa31.31■■■□□ 2.6
SYNGR3-201ENST00000248121 BLMP54132 1417 aaPredicted RBP31.3■■■□□ 2.6
SYNGR3-201ENST00000248121 SMG6Q86US8 1419 aaKnown RBP31.3■■■□□ 2.6
SYNGR3-201ENST00000248121 AKAP12Q02952 1782 aa31.3■■■□□ 2.6
SYNGR3-201ENST00000248121 CDC42BPGQ6DT37 1551 aa31.3■■■□□ 2.6
SYNGR3-201ENST00000248121 STRCQ7RTU9 1775 aa31.29■■■□□ 2.6
SYNGR3-201ENST00000248121 ITSN1Q15811 1721 aa31.29■■■□□ 2.6
SYNGR3-201ENST00000248121 NKTRP30414 1462 aaKnown RBP31.28■■■□□ 2.6
SYNGR3-201ENST00000248121 KIF20BQ96Q89 1820 aa31.28■■■□□ 2.6
SYNGR3-201ENST00000248121 TERF2IPQ9NYB0 399 aa31.28■■■□□ 2.6
SYNGR3-201ENST00000248121 STRCP1A6NGW2 1772 aa31.28■■■□□ 2.6
SYNGR3-201ENST00000248121 MON2Q7Z3U7 1717 aa31.27■■■□□ 2.6
SYNGR3-201ENST00000248121 CGNL1Q0VF96 1302 aa31.26■■■□□ 2.59
SYNGR3-201ENST00000248121 FMN2Q9NZ56 1722 aa31.26■■■□□ 2.59
SYNGR3-201ENST00000248121 CPSF1Q10570 1443 aaKnown RBP31.25■■■□□ 2.59
SYNGR3-201ENST00000248121 ANKRD26Q9UPS8 1709 aa31.25■■■□□ 2.59
SYNGR3-201ENST00000248121 CCDC61Q9Y6R9 512 aa31.25■■■□□ 2.59
SYNGR3-201ENST00000248121 HDGFL2Q7Z4V5 671 aaPredicted RBP31.23■■■□□ 2.59
SYNGR3-201ENST00000248121 NUDCQ9Y266 331 aa31.22■■■□□ 2.59
SYNGR3-201ENST00000248121 ADAMTS8Q9UP79 889 aa31.21■■■□□ 2.59
SYNGR3-201ENST00000248121 TNNT2P45379 298 aaPredicted RBP31.21■■■□□ 2.59
SYNGR3-201ENST00000248121 GGNBP2Q9H3C7 697 aa31.2■■■□□ 2.58
SYNGR3-201ENST00000248121 MORC1Q86VD1 984 aa31.19■■■□□ 2.58
SYNGR3-201ENST00000248121 NRKQ7Z2Y5 1582 aa31.17■■■□□ 2.58
SYNGR3-201ENST00000248121 FYB1O15117 783 aa31.17■■■□□ 2.58
SYNGR3-201ENST00000248121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.17■■■□□ 2.58
SYNGR3-201ENST00000248121 NSD2O96028 1365 aa31.16■■■□□ 2.58
SYNGR3-201ENST00000248121 ADGRL3Q9HAR2 1447 aa31.15■■■□□ 2.58
SYNGR3-201ENST00000248121 SALL2Q9Y467 1007 aaPredicted RBP31.14■■■□□ 2.58
SYNGR3-201ENST00000248121 IRX6P78412 446 aaPredicted RBP31.13■■■□□ 2.57
SYNGR3-201ENST00000248121 EDC4Q6P2E9 1401 aaKnown RBP31.13■■■□□ 2.57
SYNGR3-201ENST00000248121 ACEP12821 1306 aa31.12■■■□□ 2.57
SYNGR3-201ENST00000248121 WDR43Q15061 677 aaKnown RBP eCLIP31.12■■■□□ 2.57
SYNGR3-201ENST00000248121 PMFBP1Q8TBY8 1022 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms