RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 NCLP19338 710 aaKnown RBP21.29■■□□□ 1
SGPP1-201ENST00000247225 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
SGPP1-201ENST00000247225 E9PCH4 1651 aa21.29■■□□□ 1
SGPP1-201ENST00000247225 ABCA8O94911 1581 aa21.29■■□□□ 1
SGPP1-201ENST00000247225 NUP160Q12769 1436 aa21.28■■□□□ 1
SGPP1-201ENST00000247225 TRIM27P14373 513 aa21.28■■□□□ 1
SGPP1-201ENST00000247225 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
SGPP1-201ENST00000247225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.28■■□□□ 1
SGPP1-201ENST00000247225 TPRNQ4KMQ1 711 aa21.27■■□□□ 1
SGPP1-201ENST00000247225 TMEM57Q8N5G2 664 aa21.27■■□□□ 1
SGPP1-201ENST00000247225 PNNQ9H307 717 aaKnown RBP21.27■■□□□ 1
SGPP1-201ENST00000247225 RIPK4P57078 832 aa21.27■■□□□ 1
SGPP1-201ENST00000247225 MINK1Q8N4C8 1332 aaPredicted RBP21.26■□□□□ 0.99
SGPP1-201ENST00000247225 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
SGPP1-201ENST00000247225 ZBTB7CA1YPR0 619 aa21.25■□□□□ 0.99
SGPP1-201ENST00000247225 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
SGPP1-201ENST00000247225 ANTXR1Q9H6X2 564 aa21.24■□□□□ 0.99
SGPP1-201ENST00000247225 HMOX1P09601 288 aa21.24■□□□□ 0.99
SGPP1-201ENST00000247225 CHMP5Q9NZZ3 219 aa21.24■□□□□ 0.99
SGPP1-201ENST00000247225 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
SGPP1-201ENST00000247225 INSRP06213 1382 aa21.23■□□□□ 0.99
SGPP1-201ENST00000247225 UGGT1Q9NYU2 1555 aa21.22■□□□□ 0.99
SGPP1-201ENST00000247225 TRIM44Q96DX7 344 aaPredicted RBP21.21■□□□□ 0.99
SGPP1-201ENST00000247225 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
SGPP1-201ENST00000247225 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
SGPP1-201ENST00000247225 FOXD4L5Q5VV16 416 aaPredicted RBP21.2■□□□□ 0.98
SGPP1-201ENST00000247225 FOXD4L4Q8WXT5 416 aaPredicted RBP21.2■□□□□ 0.98
SGPP1-201ENST00000247225 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
SGPP1-201ENST00000247225 TMPOP42166 694 aaKnown RBP21.18■□□□□ 0.98
SGPP1-201ENST00000247225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.18■□□□□ 0.98
SGPP1-201ENST00000247225 NOS1P29475 1434 aa21.17■□□□□ 0.98
SGPP1-201ENST00000247225 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
SGPP1-201ENST00000247225 ARID3AQ99856 593 aa21.17■□□□□ 0.98
SGPP1-201ENST00000247225 DDX19BQ9UMR2 479 aa21.17■□□□□ 0.98
SGPP1-201ENST00000247225 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
SGPP1-201ENST00000247225 SOX12O15370 315 aa21.16■□□□□ 0.98
SGPP1-201ENST00000247225 CFAP65Q6ZU64 1925 aaKnown RBP21.16■□□□□ 0.98
SGPP1-201ENST00000247225 DUOX2Q9NRD8 1548 aa21.14■□□□□ 0.98
SGPP1-201ENST00000247225 ATP10AO60312 1499 aa21.14■□□□□ 0.97
SGPP1-201ENST00000247225 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
SGPP1-201ENST00000247225 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
SGPP1-201ENST00000247225 POLR3AO14802 1390 aaPredicted RBP21.12■□□□□ 0.97
SGPP1-201ENST00000247225 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
SGPP1-201ENST00000247225 TNPO1Q92973 898 aaKnown RBP21.12■□□□□ 0.97
SGPP1-201ENST00000247225 EIF2AK4Q9P2K8 1649 aaKnown RBP21.12■□□□□ 0.97
SGPP1-201ENST00000247225 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
SGPP1-201ENST00000247225 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
SGPP1-201ENST00000247225 GRPEL1Q9HAV7 217 aa21.12■□□□□ 0.97
SGPP1-201ENST00000247225 PLCH2O75038 1416 aa21.11■□□□□ 0.97
SGPP1-201ENST00000247225 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
SGPP1-201ENST00000247225 FOXD4L6Q3SYB3 417 aaPredicted RBP21.1■□□□□ 0.97
SGPP1-201ENST00000247225 FOXD4L3Q6VB84 417 aaPredicted RBP21.1■□□□□ 0.97
SGPP1-201ENST00000247225 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
SGPP1-201ENST00000247225 IPO8O15397 1037 aaKnown RBP21.09■□□□□ 0.97
SGPP1-201ENST00000247225 CD2BP2O95400 341 aaKnown RBP21.09■□□□□ 0.97
SGPP1-201ENST00000247225 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
SGPP1-201ENST00000247225 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
SGPP1-201ENST00000247225 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
SGPP1-201ENST00000247225 CHD1LQ86WJ1 897 aa21.08■□□□□ 0.97
SGPP1-201ENST00000247225 MYO5CQ9NQX4 1742 aa21.08■□□□□ 0.97
SGPP1-201ENST00000247225 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.97
SGPP1-201ENST00000247225 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
SGPP1-201ENST00000247225 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
SGPP1-201ENST00000247225 GAS2L3Q86XJ1 694 aa21.07■□□□□ 0.96
SGPP1-201ENST00000247225 SSFA2P28290 1259 aa21.07■□□□□ 0.96
SGPP1-201ENST00000247225 TSPYL6Q8N831 410 aa21.07■□□□□ 0.96
SGPP1-201ENST00000247225 ATAD2Q6PL18 1390 aa21.06■□□□□ 0.96
SGPP1-201ENST00000247225 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
SGPP1-201ENST00000247225 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
SGPP1-201ENST00000247225 NUTM2FA1L443 756 aa21.06■□□□□ 0.96
SGPP1-201ENST00000247225 MRE11P49959 708 aa21.06■□□□□ 0.96
SGPP1-201ENST00000247225 DDX49Q9Y6V7 483 aaKnown RBP21.06■□□□□ 0.96
SGPP1-201ENST00000247225 PRAM1Q96QH2 718 aa21.05■□□□□ 0.96
SGPP1-201ENST00000247225 PTPRTO14522 1441 aa21.05■□□□□ 0.96
SGPP1-201ENST00000247225 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
SGPP1-201ENST00000247225 CABP1Q9NZU7 370 aa21.05■□□□□ 0.96
SGPP1-201ENST00000247225 DDX11L8A8MPP1 907 aa21.04■□□□□ 0.96
SGPP1-201ENST00000247225 GBP4Q96PP9 640 aa21.04■□□□□ 0.96
SGPP1-201ENST00000247225 C14orf93Q9H972 538 aaKnown RBP21.04■□□□□ 0.96
SGPP1-201ENST00000247225 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
SGPP1-201ENST00000247225 CHAMP1Q96JM3 812 aa21.04■□□□□ 0.96
SGPP1-201ENST00000247225 NINLQ9Y2I6 1382 aa21.04■□□□□ 0.96
SGPP1-201ENST00000247225 C16orf71Q8IYS4 520 aaPredicted RBP21.03■□□□□ 0.96
SGPP1-201ENST00000247225 ZBTB40Q9NUA8 1239 aa21.03■□□□□ 0.96
SGPP1-201ENST00000247225 HSP90AA2PQ14568 343 aaPredicted RBP21.02■□□□□ 0.96
SGPP1-201ENST00000247225 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
SGPP1-201ENST00000247225 MCTP1Q6DN14 999 aa21.02■□□□□ 0.96
SGPP1-201ENST00000247225 UBE2Q2Q8WVN8 375 aa21.02■□□□□ 0.96
SGPP1-201ENST00000247225 ABCC2Q92887 1545 aa21.02■□□□□ 0.95
SGPP1-201ENST00000247225 ESPNB1AK53 854 aa21.01■□□□□ 0.95
SGPP1-201ENST00000247225 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
SGPP1-201ENST00000247225 PHACTR3Q96KR7 559 aa21.01■□□□□ 0.95
SGPP1-201ENST00000247225 FYB1O15117 783 aa21.01■□□□□ 0.95
SGPP1-201ENST00000247225 MPNDQ8N594 471 aa21.01■□□□□ 0.95
SGPP1-201ENST00000247225 ANP32BQ92688 251 aaKnown RBP21.01■□□□□ 0.95
SGPP1-201ENST00000247225 SYNMO15061 1565 aa21.01■□□□□ 0.95
SGPP1-201ENST00000247225 TBC1D9Q6ZT07 1266 aa21■□□□□ 0.95
SGPP1-201ENST00000247225 IQGAP3Q86VI3 1631 aa20.99■□□□□ 0.95
SGPP1-201ENST00000247225 MADDQ8WXG6 1647 aa20.99■□□□□ 0.95
SGPP1-201ENST00000247225 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms