RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 WAPLQ7Z5K2 1190 aa31.87■■■□□ 2.69
RFC2-201ENST00000055077 YTHDC1Q96MU7 727 aaKnown RBP31.86■■■□□ 2.69
RFC2-201ENST00000055077 PTPRUQ92729 1446 aa31.85■■■□□ 2.69
RFC2-201ENST00000055077 ATAD2Q6PL18 1390 aa31.83■■■□□ 2.69
RFC2-201ENST00000055077 PIK3R4Q99570 1358 aa31.83■■■□□ 2.69
RFC2-201ENST00000055077 ROBO2Q9HCK4 1378 aa31.83■■■□□ 2.69
RFC2-201ENST00000055077 RALBP1Q15311 655 aa31.83■■■□□ 2.69
RFC2-201ENST00000055077 NINLQ9Y2I6 1382 aa31.82■■■□□ 2.68
RFC2-201ENST00000055077 KNSTRNQ9Y448 316 aa31.82■■■□□ 2.68
RFC2-201ENST00000055077 PTCH1Q13635 1447 aa31.81■■■□□ 2.68
RFC2-201ENST00000055077 SRPK2P78362 688 aaKnown RBP31.81■■■□□ 2.68
RFC2-201ENST00000055077 CNGB1Q14028 1251 aaPredicted RBP31.81■■■□□ 2.68
RFC2-201ENST00000055077 CABP2Q9NPB3 220 aa31.81■■■□□ 2.68
RFC2-201ENST00000055077 XRN1Q8IZH2 1706 aaKnown RBP31.81■■■□□ 2.68
RFC2-201ENST00000055077 PARD3Q8TEW0 1356 aa31.8■■■□□ 2.68
RFC2-201ENST00000055077 TMC1Q8TDI8 760 aa31.79■■■□□ 2.68
RFC2-201ENST00000055077 ADGRB2O60241 1585 aa31.77■■■□□ 2.68
RFC2-201ENST00000055077 AMOTL2Q9Y2J4 779 aa31.76■■■□□ 2.68
RFC2-201ENST00000055077 NPHP4O75161 1426 aaPredicted RBP31.76■■■□□ 2.67
RFC2-201ENST00000055077 KDM4FA0A1W2PPD8 638 aa31.76■■■□□ 2.67
RFC2-201ENST00000055077 CDK19Q9BWU1 502 aa31.76■■■□□ 2.67
RFC2-201ENST00000055077 SLC12A5Q9H2X9 1139 aa31.76■■■□□ 2.67
RFC2-201ENST00000055077 NPC1L1Q9UHC9 1359 aa31.76■■■□□ 2.67
RFC2-201ENST00000055077 MYBBP1AQ9BQG0 1328 aaKnown RBP31.74■■■□□ 2.67
RFC2-201ENST00000055077 ANKRD36BQ8N2N9 1353 aa31.73■■■□□ 2.67
RFC2-201ENST00000055077 AMER1Q5JTC6 1135 aaPredicted RBP31.73■■■□□ 2.67
RFC2-201ENST00000055077 CC2D1BQ5T0F9 858 aaKnown RBP31.73■■■□□ 2.67
RFC2-201ENST00000055077 MRS2Q9HD23 443 aa31.71■■■□□ 2.67
RFC2-201ENST00000055077 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.71■■■□□ 2.67
RFC2-201ENST00000055077 WASLO00401 505 aaPredicted RBP31.7■■■□□ 2.67
RFC2-201ENST00000055077 CARD14Q9BXL6 1004 aa31.7■■■□□ 2.67
RFC2-201ENST00000055077 CCDC184Q52MB2 194 aa31.7■■■□□ 2.66
RFC2-201ENST00000055077 USP32Q8NFA0 1604 aa31.7■■■□□ 2.66
RFC2-201ENST00000055077 NSD3Q9BZ95 1437 aa31.69■■■□□ 2.66
RFC2-201ENST00000055077 CENPBP07199 599 aaPredicted RBP31.69■■■□□ 2.66
RFC2-201ENST00000055077 CHD2O14647 1828 aaKnown RBP31.68■■■□□ 2.66
RFC2-201ENST00000055077 BRD4O60885 1362 aaPredicted RBP31.65■■■□□ 2.66
RFC2-201ENST00000055077 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
RFC2-201ENST00000055077 A0A1W2PP64 1363 aa31.63■■■□□ 2.65
RFC2-201ENST00000055077 KCNA6P17658 529 aa31.63■■■□□ 2.65
RFC2-201ENST00000055077 NLRP13Q86W25 1043 aa31.62■■■□□ 2.65
RFC2-201ENST00000055077 ATP7BP35670 1465 aa31.62■■■□□ 2.65
RFC2-201ENST00000055077 CD163L1Q9NR16 1453 aa31.62■■■□□ 2.65
RFC2-201ENST00000055077 TERF2IPQ9NYB0 399 aa31.6■■■□□ 2.65
RFC2-201ENST00000055077 LMTK3Q96Q04 1460 aa31.57■■■□□ 2.64
RFC2-201ENST00000055077 CABP1Q9NZU7 370 aa31.57■■■□□ 2.64
RFC2-201ENST00000055077 CGNL1Q0VF96 1302 aa31.56■■■□□ 2.64
RFC2-201ENST00000055077 NWD1Q149M9 1564 aa31.56■■■□□ 2.64
RFC2-201ENST00000055077 PPIP5K1Q6PFW1 1433 aa31.56■■■□□ 2.64
RFC2-201ENST00000055077 HDGFL2Q7Z4V5 671 aaPredicted RBP31.55■■■□□ 2.64
RFC2-201ENST00000055077 NUDT16Q96DE0 195 aaKnown RBP31.55■■■□□ 2.64
RFC2-201ENST00000055077 NSD2O96028 1365 aa31.54■■■□□ 2.64
RFC2-201ENST00000055077 TOPAZ1Q8N9V7 1692 aa31.54■■■□□ 2.64
RFC2-201ENST00000055077 CCDC61Q9Y6R9 512 aa31.53■■■□□ 2.64
RFC2-201ENST00000055077 CDC42BPGQ6DT37 1551 aa31.52■■■□□ 2.64
RFC2-201ENST00000055077 PRR36Q9H6K5 1346 aa31.5■■■□□ 2.63
RFC2-201ENST00000055077 FAM9BQ8IZU0 186 aa31.5■■■□□ 2.63
RFC2-201ENST00000055077 PPP2R1AP30153 589 aa31.49■■■□□ 2.63
RFC2-201ENST00000055077 CPSF1Q10570 1443 aaKnown RBP31.49■■■□□ 2.63
RFC2-201ENST00000055077 HSPA2P54652 639 aa31.48■■■□□ 2.63
RFC2-201ENST00000055077 NALCNQ8IZF0 1738 aa31.47■■■□□ 2.63
RFC2-201ENST00000055077 ITSN1Q15811 1721 aa31.47■■■□□ 2.63
RFC2-201ENST00000055077 PNISRQ8TF01 805 aaKnown RBP31.46■■■□□ 2.63
RFC2-201ENST00000055077 AKAP12Q02952 1782 aa31.44■■■□□ 2.62
RFC2-201ENST00000055077 MON2Q7Z3U7 1717 aa31.44■■■□□ 2.62
RFC2-201ENST00000055077 FMN2Q9NZ56 1722 aa31.43■■■□□ 2.62
RFC2-201ENST00000055077 ANKRD26Q9UPS8 1709 aa31.43■■■□□ 2.62
RFC2-201ENST00000055077 NKTRP30414 1462 aaKnown RBP31.43■■■□□ 2.62
RFC2-201ENST00000055077 MORC1Q86VD1 984 aa31.43■■■□□ 2.62
RFC2-201ENST00000055077 KIF20BQ96Q89 1820 aa31.43■■■□□ 2.62
RFC2-201ENST00000055077 ANKARQ7Z5J8 1434 aa31.42■■■□□ 2.62
RFC2-201ENST00000055077 EDC4Q6P2E9 1401 aaKnown RBP31.41■■■□□ 2.62
RFC2-201ENST00000055077 ADGRL3Q9HAR2 1447 aa31.41■■■□□ 2.62
RFC2-201ENST00000055077 STRCQ7RTU9 1775 aa31.38■■■□□ 2.61
RFC2-201ENST00000055077 PLEKHG3A1L390 1219 aa31.38■■■□□ 2.61
RFC2-201ENST00000055077 HNRNPUQ00839 825 aaKnown RBP eCLIP31.38■■■□□ 2.61
RFC2-201ENST00000055077 NUTM2FA1L443 756 aa31.37■■■□□ 2.61
RFC2-201ENST00000055077 ZNF692Q9BU19 519 aaPredicted RBP31.36■■■□□ 2.61
RFC2-201ENST00000055077 FYB1O15117 783 aa31.35■■■□□ 2.61
RFC2-201ENST00000055077 NRKQ7Z2Y5 1582 aa31.33■■■□□ 2.61
RFC2-201ENST00000055077 RGPD8O14715 1765 aaPredicted RBP31.33■■■□□ 2.61
RFC2-201ENST00000055077 GGNBP2Q9H3C7 697 aa31.32■■■□□ 2.6
RFC2-201ENST00000055077 ACEP12821 1306 aa31.31■■■□□ 2.6
RFC2-201ENST00000055077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.29■■■□□ 2.6
RFC2-201ENST00000055077 RBM33Q96EV2 1170 aaKnown RBP31.29■■■□□ 2.6
RFC2-201ENST00000055077 STRCP1A6NGW2 1772 aa31.29■■■□□ 2.6
RFC2-201ENST00000055077 POLR3AO14802 1390 aaPredicted RBP31.28■■■□□ 2.6
RFC2-201ENST00000055077 INSRP06213 1382 aa31.28■■■□□ 2.6
RFC2-201ENST00000055077 USP6P35125 1406 aa31.28■■■□□ 2.6
RFC2-201ENST00000055077 TNNT2P45379 298 aaPredicted RBP31.28■■■□□ 2.6
RFC2-201ENST00000055077 PROSER2Q86WR7 435 aaPredicted RBP31.28■■■□□ 2.6
RFC2-201ENST00000055077 C14orf37Q86TY3 774 aa31.27■■■□□ 2.6
RFC2-201ENST00000055077 NCOA3Q9Y6Q9 1424 aa31.23■■■□□ 2.59
RFC2-201ENST00000055077 ZBED9Q6R2W3 1325 aa31.22■■■□□ 2.59
RFC2-201ENST00000055077 PMFBP1Q8TBY8 1022 aa31.22■■■□□ 2.59
RFC2-201ENST00000055077 WDR43Q15061 677 aaKnown RBP eCLIP31.21■■■□□ 2.59
RFC2-201ENST00000055077 BLMP54132 1417 aaPredicted RBP31.21■■■□□ 2.59
RFC2-201ENST00000055077 SSH2Q76I76 1423 aa31.21■■■□□ 2.59
RFC2-201ENST00000055077 NME9Q86XW9 330 aa31.2■■■□□ 2.59
RFC2-201ENST00000055077 NGDNQ8NEJ9 315 aaKnown RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms