RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SIRT1Q96EB6 747 aa30.34■■■□□ 2.45
HOXC8-201ENST00000040584 ROBO2Q9HCK4 1378 aa30.34■■■□□ 2.45
HOXC8-201ENST00000040584 CPS1P31327 1500 aa30.33■■■□□ 2.45
HOXC8-201ENST00000040584 FAM135BQ49AJ0 1406 aa30.32■■■□□ 2.44
HOXC8-201ENST00000040584 PIK3R4Q99570 1358 aa30.31■■■□□ 2.44
HOXC8-201ENST00000040584 EVC2Q86UK5 1308 aa30.3■■■□□ 2.44
HOXC8-201ENST00000040584 TULP4Q9NRJ4 1543 aa30.3■■■□□ 2.44
HOXC8-201ENST00000040584 KCNA6P17658 529 aa30.25■■■□□ 2.43
HOXC8-201ENST00000040584 XRN1Q8IZH2 1706 aaKnown RBP30.25■■■□□ 2.43
HOXC8-201ENST00000040584 CABP2Q9NPB3 220 aa30.23■■■□□ 2.43
HOXC8-201ENST00000040584 PTCH1Q13635 1447 aa30.23■■■□□ 2.43
HOXC8-201ENST00000040584 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
HOXC8-201ENST00000040584 SRPK2P78362 688 aaKnown RBP30.21■■■□□ 2.43
HOXC8-201ENST00000040584 CDK19Q9BWU1 502 aa30.21■■■□□ 2.43
HOXC8-201ENST00000040584 PANK3Q9H999 370 aa30.21■■■□□ 2.43
HOXC8-201ENST00000040584 ANP32CO43423 234 aa30.2■■■□□ 2.42
HOXC8-201ENST00000040584 MYOM1P52179 1685 aa30.2■■■□□ 2.42
HOXC8-201ENST00000040584 PUS7Q96PZ0 661 aaKnown RBP30.19■■■□□ 2.42
HOXC8-201ENST00000040584 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.17■■■□□ 2.42
HOXC8-201ENST00000040584 STRCQ7RTU9 1775 aa30.16■■■□□ 2.42
HOXC8-201ENST00000040584 TMC1Q8TDI8 760 aa30.16■■■□□ 2.42
HOXC8-201ENST00000040584 WASLO00401 505 aaPredicted RBP30.15■■■□□ 2.42
HOXC8-201ENST00000040584 SLC12A5Q9H2X9 1139 aa30.14■■■□□ 2.42
HOXC8-201ENST00000040584 PER1O15534 1290 aaPredicted RBP30.12■■■□□ 2.41
HOXC8-201ENST00000040584 CNGB1Q14028 1251 aaPredicted RBP30.1■■■□□ 2.41
HOXC8-201ENST00000040584 ATAD2Q6PL18 1390 aa30.1■■■□□ 2.41
HOXC8-201ENST00000040584 RBM33Q96EV2 1170 aaKnown RBP30.08■■■□□ 2.41
HOXC8-201ENST00000040584 ADGRB2O60241 1585 aa30.08■■■□□ 2.41
HOXC8-201ENST00000040584 NWD1Q149M9 1564 aa30.07■■■□□ 2.4
HOXC8-201ENST00000040584 CCER2I3L3R5 266 aa30.06■■■□□ 2.4
HOXC8-201ENST00000040584 PRKRIP1Q9H875 184 aaPredicted RBP30.06■■■□□ 2.4
HOXC8-201ENST00000040584 CARD14Q9BXL6 1004 aa30.03■■■□□ 2.4
HOXC8-201ENST00000040584 NUDT16Q96DE0 195 aaKnown RBP30.02■■■□□ 2.4
HOXC8-201ENST00000040584 KNSTRNQ9Y448 316 aa30.02■■■□□ 2.4
HOXC8-201ENST00000040584 CABP1Q9NZU7 370 aa30.02■■■□□ 2.4
HOXC8-201ENST00000040584 NINLQ9Y2I6 1382 aa30.01■■■□□ 2.4
HOXC8-201ENST00000040584 NUTM2FA1L443 756 aa30■■■□□ 2.39
HOXC8-201ENST00000040584 PROSER2Q86WR7 435 aaPredicted RBP30■■■□□ 2.39
HOXC8-201ENST00000040584 PRR36Q9H6K5 1346 aa29.99■■■□□ 2.39
HOXC8-201ENST00000040584 ANKRD36BQ8N2N9 1353 aa29.98■■■□□ 2.39
HOXC8-201ENST00000040584 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
HOXC8-201ENST00000040584 NKTRP30414 1462 aaKnown RBP29.97■■■□□ 2.39
HOXC8-201ENST00000040584 CCDC61Q9Y6R9 512 aa29.97■■■□□ 2.39
HOXC8-201ENST00000040584 ATP7BP35670 1465 aa29.97■■■□□ 2.39
HOXC8-201ENST00000040584 CC2D1BQ5T0F9 858 aaKnown RBP29.96■■■□□ 2.39
HOXC8-201ENST00000040584 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
HOXC8-201ENST00000040584 PPIP5K1Q6PFW1 1433 aa29.95■■■□□ 2.39
HOXC8-201ENST00000040584 AMER1Q5JTC6 1135 aaPredicted RBP29.95■■■□□ 2.38
HOXC8-201ENST00000040584 C14orf37Q86TY3 774 aa29.95■■■□□ 2.38
HOXC8-201ENST00000040584 A0A1W2PP64 1363 aa29.94■■■□□ 2.38
HOXC8-201ENST00000040584 CD163L1Q9NR16 1453 aa29.94■■■□□ 2.38
HOXC8-201ENST00000040584 NSD3Q9BZ95 1437 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 ADGRL3Q9HAR2 1447 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 KTN1Q86UP2 1357 aaKnown RBP29.93■■■□□ 2.38
HOXC8-201ENST00000040584 DMRT2Q9Y5R5 561 aa29.91■■■□□ 2.38
HOXC8-201ENST00000040584 HDGFL2Q7Z4V5 671 aaPredicted RBP29.9■■■□□ 2.38
HOXC8-201ENST00000040584 ZNF335Q9H4Z2 1342 aaPredicted RBP29.9■■■□□ 2.38
HOXC8-201ENST00000040584 USP32Q8NFA0 1604 aa29.89■■■□□ 2.38
HOXC8-201ENST00000040584 CDC42BPGQ6DT37 1551 aa29.89■■■□□ 2.37
HOXC8-201ENST00000040584 TMEM94Q12767 1356 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 PARD3Q8TEW0 1356 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 RALBP1Q15311 655 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 NPC1L1Q9UHC9 1359 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 FMN2Q9NZ56 1722 aa29.87■■■□□ 2.37
HOXC8-201ENST00000040584 TOPAZ1Q8N9V7 1692 aa29.86■■■□□ 2.37
HOXC8-201ENST00000040584 RGPD8O14715 1765 aaPredicted RBP29.84■■■□□ 2.37
HOXC8-201ENST00000040584 SUPT16HQ9Y5B9 1047 aaKnown RBP29.84■■■□□ 2.37
HOXC8-201ENST00000040584 ANKARQ7Z5J8 1434 aa29.84■■■□□ 2.37
HOXC8-201ENST00000040584 CPSF1Q10570 1443 aaKnown RBP29.83■■■□□ 2.37
HOXC8-201ENST00000040584 PLEKHG3A1L390 1219 aa29.82■■■□□ 2.37
HOXC8-201ENST00000040584 C19orf44Q9H6X5 657 aa29.82■■■□□ 2.37
HOXC8-201ENST00000040584 CGNL1Q0VF96 1302 aa29.82■■■□□ 2.36
HOXC8-201ENST00000040584 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
HOXC8-201ENST00000040584 PMFBP1Q8TBY8 1022 aa29.8■■■□□ 2.36
HOXC8-201ENST00000040584 ACEP12821 1306 aa29.8■■■□□ 2.36
HOXC8-201ENST00000040584 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
HOXC8-201ENST00000040584 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
HOXC8-201ENST00000040584 ITSN1Q15811 1721 aa29.78■■■□□ 2.36
HOXC8-201ENST00000040584 ZNF692Q9BU19 519 aaPredicted RBP29.77■■■□□ 2.36
HOXC8-201ENST00000040584 LRRC7Q96NW7 1537 aa29.77■■■□□ 2.36
HOXC8-201ENST00000040584 AKAP12Q02952 1782 aa29.75■■■□□ 2.35
HOXC8-201ENST00000040584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.75■■■□□ 2.35
HOXC8-201ENST00000040584 NGDNQ8NEJ9 315 aaKnown RBP29.74■■■□□ 2.35
HOXC8-201ENST00000040584 MRS2Q9HD23 443 aa29.74■■■□□ 2.35
HOXC8-201ENST00000040584 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 FYB1O15117 783 aa29.73■■■□□ 2.35
HOXC8-201ENST00000040584 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 EDC4Q6P2E9 1401 aaKnown RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 MON2Q7Z3U7 1717 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 ATF3P18847 181 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 MORC1Q86VD1 984 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 POLR3AO14802 1390 aaPredicted RBP29.71■■■□□ 2.35
HOXC8-201ENST00000040584 NSD2O96028 1365 aa29.71■■■□□ 2.35
HOXC8-201ENST00000040584 GGNBP2Q9H3C7 697 aa29.71■■■□□ 2.35
HOXC8-201ENST00000040584 PHF8Q9UPP1 1060 aa29.7■■■□□ 2.35
HOXC8-201ENST00000040584 MSH6P52701 1360 aa29.7■■■□□ 2.34
HOXC8-201ENST00000040584 NLRP13Q86W25 1043 aa29.7■■■□□ 2.34
HOXC8-201ENST00000040584 PPP2R1AP30153 589 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 809.1 ms