RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SIRT1Q96EB6 747 aa30.34■■■□□ 2.45
HOXC8-201ENST00000040584 ROBO2Q9HCK4 1378 aa30.34■■■□□ 2.45
HOXC8-201ENST00000040584 CPS1P31327 1500 aa30.33■■■□□ 2.45
HOXC8-201ENST00000040584 FAM135BQ49AJ0 1406 aa30.32■■■□□ 2.44
HOXC8-201ENST00000040584 PIK3R4Q99570 1358 aa30.31■■■□□ 2.44
HOXC8-201ENST00000040584 EVC2Q86UK5 1308 aa30.3■■■□□ 2.44
HOXC8-201ENST00000040584 TULP4Q9NRJ4 1543 aa30.3■■■□□ 2.44
HOXC8-201ENST00000040584 KCNA6P17658 529 aa30.25■■■□□ 2.43
HOXC8-201ENST00000040584 XRN1Q8IZH2 1706 aaKnown RBP30.25■■■□□ 2.43
HOXC8-201ENST00000040584 CABP2Q9NPB3 220 aa30.23■■■□□ 2.43
HOXC8-201ENST00000040584 PTCH1Q13635 1447 aa30.23■■■□□ 2.43
HOXC8-201ENST00000040584 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
HOXC8-201ENST00000040584 SRPK2P78362 688 aaKnown RBP30.21■■■□□ 2.43
HOXC8-201ENST00000040584 CDK19Q9BWU1 502 aa30.21■■■□□ 2.43
HOXC8-201ENST00000040584 PANK3Q9H999 370 aa30.21■■■□□ 2.43
HOXC8-201ENST00000040584 ANP32CO43423 234 aa30.2■■■□□ 2.42
HOXC8-201ENST00000040584 MYOM1P52179 1685 aa30.2■■■□□ 2.42
HOXC8-201ENST00000040584 PUS7Q96PZ0 661 aaKnown RBP30.19■■■□□ 2.42
HOXC8-201ENST00000040584 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.17■■■□□ 2.42
HOXC8-201ENST00000040584 STRCQ7RTU9 1775 aa30.16■■■□□ 2.42
HOXC8-201ENST00000040584 TMC1Q8TDI8 760 aa30.16■■■□□ 2.42
HOXC8-201ENST00000040584 WASLO00401 505 aaPredicted RBP30.15■■■□□ 2.42
HOXC8-201ENST00000040584 SLC12A5Q9H2X9 1139 aa30.14■■■□□ 2.42
HOXC8-201ENST00000040584 PER1O15534 1290 aaPredicted RBP30.12■■■□□ 2.41
HOXC8-201ENST00000040584 CNGB1Q14028 1251 aaPredicted RBP30.1■■■□□ 2.41
HOXC8-201ENST00000040584 ATAD2Q6PL18 1390 aa30.1■■■□□ 2.41
HOXC8-201ENST00000040584 RBM33Q96EV2 1170 aaKnown RBP30.08■■■□□ 2.41
HOXC8-201ENST00000040584 ADGRB2O60241 1585 aa30.08■■■□□ 2.41
HOXC8-201ENST00000040584 NWD1Q149M9 1564 aa30.07■■■□□ 2.4
HOXC8-201ENST00000040584 CCER2I3L3R5 266 aa30.06■■■□□ 2.4
HOXC8-201ENST00000040584 PRKRIP1Q9H875 184 aaPredicted RBP30.06■■■□□ 2.4
HOXC8-201ENST00000040584 CARD14Q9BXL6 1004 aa30.03■■■□□ 2.4
HOXC8-201ENST00000040584 NUDT16Q96DE0 195 aaKnown RBP30.02■■■□□ 2.4
HOXC8-201ENST00000040584 KNSTRNQ9Y448 316 aa30.02■■■□□ 2.4
HOXC8-201ENST00000040584 CABP1Q9NZU7 370 aa30.02■■■□□ 2.4
HOXC8-201ENST00000040584 NINLQ9Y2I6 1382 aa30.01■■■□□ 2.4
HOXC8-201ENST00000040584 NUTM2FA1L443 756 aa30■■■□□ 2.39
HOXC8-201ENST00000040584 PROSER2Q86WR7 435 aaPredicted RBP30■■■□□ 2.39
HOXC8-201ENST00000040584 PRR36Q9H6K5 1346 aa29.99■■■□□ 2.39
HOXC8-201ENST00000040584 ANKRD36BQ8N2N9 1353 aa29.98■■■□□ 2.39
HOXC8-201ENST00000040584 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
HOXC8-201ENST00000040584 NKTRP30414 1462 aaKnown RBP29.97■■■□□ 2.39
HOXC8-201ENST00000040584 CCDC61Q9Y6R9 512 aa29.97■■■□□ 2.39
HOXC8-201ENST00000040584 ATP7BP35670 1465 aa29.97■■■□□ 2.39
HOXC8-201ENST00000040584 CC2D1BQ5T0F9 858 aaKnown RBP29.96■■■□□ 2.39
HOXC8-201ENST00000040584 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
HOXC8-201ENST00000040584 PPIP5K1Q6PFW1 1433 aa29.95■■■□□ 2.39
HOXC8-201ENST00000040584 AMER1Q5JTC6 1135 aaPredicted RBP29.95■■■□□ 2.38
HOXC8-201ENST00000040584 C14orf37Q86TY3 774 aa29.95■■■□□ 2.38
HOXC8-201ENST00000040584 A0A1W2PP64 1363 aa29.94■■■□□ 2.38
HOXC8-201ENST00000040584 CD163L1Q9NR16 1453 aa29.94■■■□□ 2.38
HOXC8-201ENST00000040584 NSD3Q9BZ95 1437 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 ADGRL3Q9HAR2 1447 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
HOXC8-201ENST00000040584 KTN1Q86UP2 1357 aaKnown RBP29.93■■■□□ 2.38
HOXC8-201ENST00000040584 DMRT2Q9Y5R5 561 aa29.91■■■□□ 2.38
HOXC8-201ENST00000040584 HDGFL2Q7Z4V5 671 aaPredicted RBP29.9■■■□□ 2.38
HOXC8-201ENST00000040584 ZNF335Q9H4Z2 1342 aaPredicted RBP29.9■■■□□ 2.38
HOXC8-201ENST00000040584 USP32Q8NFA0 1604 aa29.89■■■□□ 2.38
HOXC8-201ENST00000040584 CDC42BPGQ6DT37 1551 aa29.89■■■□□ 2.37
HOXC8-201ENST00000040584 TMEM94Q12767 1356 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 PARD3Q8TEW0 1356 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 RALBP1Q15311 655 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 NPC1L1Q9UHC9 1359 aa29.88■■■□□ 2.37
HOXC8-201ENST00000040584 FMN2Q9NZ56 1722 aa29.87■■■□□ 2.37
HOXC8-201ENST00000040584 TOPAZ1Q8N9V7 1692 aa29.86■■■□□ 2.37
HOXC8-201ENST00000040584 RGPD8O14715 1765 aaPredicted RBP29.84■■■□□ 2.37
HOXC8-201ENST00000040584 SUPT16HQ9Y5B9 1047 aaKnown RBP29.84■■■□□ 2.37
HOXC8-201ENST00000040584 ANKARQ7Z5J8 1434 aa29.84■■■□□ 2.37
HOXC8-201ENST00000040584 CPSF1Q10570 1443 aaKnown RBP29.83■■■□□ 2.37
HOXC8-201ENST00000040584 PLEKHG3A1L390 1219 aa29.82■■■□□ 2.37
HOXC8-201ENST00000040584 C19orf44Q9H6X5 657 aa29.82■■■□□ 2.37
HOXC8-201ENST00000040584 CGNL1Q0VF96 1302 aa29.82■■■□□ 2.36
HOXC8-201ENST00000040584 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
HOXC8-201ENST00000040584 PMFBP1Q8TBY8 1022 aa29.8■■■□□ 2.36
HOXC8-201ENST00000040584 ACEP12821 1306 aa29.8■■■□□ 2.36
HOXC8-201ENST00000040584 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
HOXC8-201ENST00000040584 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
HOXC8-201ENST00000040584 ITSN1Q15811 1721 aa29.78■■■□□ 2.36
HOXC8-201ENST00000040584 ZNF692Q9BU19 519 aaPredicted RBP29.77■■■□□ 2.36
HOXC8-201ENST00000040584 LRRC7Q96NW7 1537 aa29.77■■■□□ 2.36
HOXC8-201ENST00000040584 AKAP12Q02952 1782 aa29.75■■■□□ 2.35
HOXC8-201ENST00000040584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.75■■■□□ 2.35
HOXC8-201ENST00000040584 NGDNQ8NEJ9 315 aaKnown RBP29.74■■■□□ 2.35
HOXC8-201ENST00000040584 MRS2Q9HD23 443 aa29.74■■■□□ 2.35
HOXC8-201ENST00000040584 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 FYB1O15117 783 aa29.73■■■□□ 2.35
HOXC8-201ENST00000040584 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 EDC4Q6P2E9 1401 aaKnown RBP29.73■■■□□ 2.35
HOXC8-201ENST00000040584 MON2Q7Z3U7 1717 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 ATF3P18847 181 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 MORC1Q86VD1 984 aa29.72■■■□□ 2.35
HOXC8-201ENST00000040584 POLR3AO14802 1390 aaPredicted RBP29.71■■■□□ 2.35
HOXC8-201ENST00000040584 NSD2O96028 1365 aa29.71■■■□□ 2.35
HOXC8-201ENST00000040584 GGNBP2Q9H3C7 697 aa29.71■■■□□ 2.35
HOXC8-201ENST00000040584 PHF8Q9UPP1 1060 aa29.7■■■□□ 2.35
HOXC8-201ENST00000040584 MSH6P52701 1360 aa29.7■■■□□ 2.34
HOXC8-201ENST00000040584 NLRP13Q86W25 1043 aa29.7■■■□□ 2.34
HOXC8-201ENST00000040584 PPP2R1AP30153 589 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms