RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CARD14Q9BXL6 1004 aa15.4■□□□□ 0.06
CHPF2-201ENST00000035307 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
CHPF2-201ENST00000035307 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
CHPF2-201ENST00000035307 RTF1Q92541 710 aaKnown RBP15.4■□□□□ 0.06
CHPF2-201ENST00000035307 RPGRIP1LQ68CZ1 1315 aa15.4■□□□□ 0.06
CHPF2-201ENST00000035307 PDE4AP27815 886 aa15.39■□□□□ 0.05
CHPF2-201ENST00000035307 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
CHPF2-201ENST00000035307 PLA2R1Q13018 1463 aa15.39■□□□□ 0.05
CHPF2-201ENST00000035307 BECN1Q14457 450 aa15.38■□□□□ 0.05
CHPF2-201ENST00000035307 IPO9Q96P70 1041 aaKnown RBP15.38■□□□□ 0.05
CHPF2-201ENST00000035307 TNRQ92752 1358 aa15.38■□□□□ 0.05
CHPF2-201ENST00000035307 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
CHPF2-201ENST00000035307 LTKP29376 864 aa15.37■□□□□ 0.05
CHPF2-201ENST00000035307 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
CHPF2-201ENST00000035307 ABCC1P33527 1531 aa15.36■□□□□ 0.05
CHPF2-201ENST00000035307 CDC42BPBQ9Y5S2 1711 aa15.36■□□□□ 0.05
CHPF2-201ENST00000035307 PREX2Q70Z35 1606 aa15.36■□□□□ 0.05
CHPF2-201ENST00000035307 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
CHPF2-201ENST00000035307 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
CHPF2-201ENST00000035307 ATF3P18847 181 aa15.35■□□□□ 0.05
CHPF2-201ENST00000035307 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
CHPF2-201ENST00000035307 PDE3BQ13370 1112 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 SLC4A10Q6U841 1118 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
CHPF2-201ENST00000035307 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
CHPF2-201ENST00000035307 GCC2Q8IWJ2 1684 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 SULT6B1Q6IMI4 303 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 BCAR3O75815 825 aa15.34■□□□□ 0.05
CHPF2-201ENST00000035307 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-201ENST00000035307 PANK1Q8TE04 598 aa15.33■□□□□ 0.04
CHPF2-201ENST00000035307 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-201ENST00000035307 KCNA6P17658 529 aa15.33■□□□□ 0.04
CHPF2-201ENST00000035307 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
CHPF2-201ENST00000035307 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-201ENST00000035307 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-201ENST00000035307 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
CHPF2-201ENST00000035307 ATP10AO60312 1499 aa15.32■□□□□ 0.04
CHPF2-201ENST00000035307 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
CHPF2-201ENST00000035307 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
CHPF2-201ENST00000035307 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
CHPF2-201ENST00000035307 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
CHPF2-201ENST00000035307 MSH5O43196 834 aa15.31■□□□□ 0.04
CHPF2-201ENST00000035307 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
CHPF2-201ENST00000035307 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
CHPF2-201ENST00000035307 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
CHPF2-201ENST00000035307 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
CHPF2-201ENST00000035307 EIF2S2P20042 333 aaKnown RBP15.29■□□□□ 0.04
CHPF2-201ENST00000035307 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
CHPF2-201ENST00000035307 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
CHPF2-201ENST00000035307 MAST1Q9Y2H9 1570 aa15.29■□□□□ 0.04
CHPF2-201ENST00000035307 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
CHPF2-201ENST00000035307 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
CHPF2-201ENST00000035307 FYB1O15117 783 aa15.28■□□□□ 0.04
CHPF2-201ENST00000035307 PIP4K2BP78356 416 aa15.27■□□□□ 0.04
CHPF2-201ENST00000035307 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
CHPF2-201ENST00000035307 ACEP12821 1306 aa15.27■□□□□ 0.03
CHPF2-201ENST00000035307 ADGBQ8N7X0 1667 aa15.27■□□□□ 0.03
CHPF2-201ENST00000035307 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
CHPF2-201ENST00000035307 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CHPF2-201ENST00000035307 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
CHPF2-201ENST00000035307 ZFYVE16Q7Z3T8 1539 aa15.25■□□□□ 0.03
CHPF2-201ENST00000035307 PRDM15P57071 1507 aaPredicted RBP15.25■□□□□ 0.03
CHPF2-201ENST00000035307 NEO1Q92859 1461 aa15.25■□□□□ 0.03
CHPF2-201ENST00000035307 CABLES1Q8TDN4 633 aa15.25■□□□□ 0.03
CHPF2-201ENST00000035307 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
CHPF2-201ENST00000035307 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
CHPF2-201ENST00000035307 HSP90AB2PQ58FF8 381 aa15.24■□□□□ 0.03
CHPF2-201ENST00000035307 E9PSI1 815 aa15.24■□□□□ 0.03
CHPF2-201ENST00000035307 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
CHPF2-201ENST00000035307 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
CHPF2-201ENST00000035307 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
CHPF2-201ENST00000035307 MCM10Q7L590 875 aa15.23■□□□□ 0.03
CHPF2-201ENST00000035307 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
CHPF2-201ENST00000035307 ANP32BQ92688 251 aaKnown RBP15.22■□□□□ 0.03
CHPF2-201ENST00000035307 SYTL4Q96C24 671 aaPredicted RBP15.22■□□□□ 0.03
CHPF2-201ENST00000035307 KAT6BQ8WYB5 2073 aa15.22■□□□□ 0.03
CHPF2-201ENST00000035307 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
CHPF2-201ENST00000035307 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
CHPF2-201ENST00000035307 EVA1CP58658 441 aa15.22■□□□□ 0.03
CHPF2-201ENST00000035307 NUTM2AQ8IVF1 878 aaPredicted RBP15.22■□□□□ 0.03
CHPF2-201ENST00000035307 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
CHPF2-201ENST00000035307 SPATA31E1Q6ZUB1 1445 aa15.22■□□□□ 0.03
CHPF2-201ENST00000035307 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
CHPF2-201ENST00000035307 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
CHPF2-201ENST00000035307 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.03
CHPF2-201ENST00000035307 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.03
CHPF2-201ENST00000035307 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
CHPF2-201ENST00000035307 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
CHPF2-201ENST00000035307 METP08581 1390 aa15.2■□□□□ 0.02
CHPF2-201ENST00000035307 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
CHPF2-201ENST00000035307 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
CHPF2-201ENST00000035307 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
CHPF2-201ENST00000035307 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
CHPF2-201ENST00000035307 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
CHPF2-201ENST00000035307 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
CHPF2-201ENST00000035307 TEFQ10587 303 aa15.18■□□□□ 0.02
CHPF2-201ENST00000035307 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
CHPF2-201ENST00000035307 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
CHPF2-201ENST00000035307 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms