RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 INO80Q9ULG1 1556 aaPredicted RBP6.42□□□□□ -1.38
CDH17-201ENST00000027335 NUTM2FA1L443 756 aa6.42□□□□□ -1.38
CDH17-201ENST00000027335 NCLP19338 710 aaKnown RBP6.42□□□□□ -1.38
CDH17-201ENST00000027335 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.42□□□□□ -1.38
CDH17-201ENST00000027335 KIF7Q2M1P5 1343 aa6.42□□□□□ -1.38
CDH17-201ENST00000027335 FBXO31Q5XUX0 539 aaPredicted RBP6.42□□□□□ -1.38
CDH17-201ENST00000027335 ZBTB47Q9UFB7 747 aaPredicted RBP6.42□□□□□ -1.38
CDH17-201ENST00000027335 CLSTN1O94985 981 aa6.41□□□□□ -1.38
CDH17-201ENST00000027335 HSPA2P54652 639 aa6.41□□□□□ -1.38
CDH17-201ENST00000027335 CCDC184Q52MB2 194 aa6.41□□□□□ -1.38
CDH17-201ENST00000027335 IQGAP1P46940 1657 aa6.41□□□□□ -1.38
CDH17-201ENST00000027335 SETD1AO15047 1707 aaKnown RBP6.41□□□□□ -1.38
CDH17-201ENST00000027335 ZNF592Q92610 1267 aa6.41□□□□□ -1.38
CDH17-201ENST00000027335 FRAT1Q92837 279 aaPredicted RBP6.41□□□□□ -1.38
CDH17-201ENST00000027335 ABCC3O15438 1527 aa6.4□□□□□ -1.38
CDH17-201ENST00000027335 U2SURPO15042 1029 aaKnown RBP6.4□□□□□ -1.38
CDH17-201ENST00000027335 RGS3P49796 1198 aa6.4□□□□□ -1.38
CDH17-201ENST00000027335 PANK3Q9H999 370 aa6.4□□□□□ -1.38
CDH17-201ENST00000027335 KTN1Q86UP2 1357 aaKnown RBP6.4□□□□□ -1.38
CDH17-201ENST00000027335 SRPK2P78362 688 aaKnown RBP6.4□□□□□ -1.38
CDH17-201ENST00000027335 PSMD1Q99460 953 aa6.4□□□□□ -1.38
CDH17-201ENST00000027335 NLRP1Q9C000 1473 aa6.4□□□□□ -1.38
CDH17-201ENST00000027335 TOM1O60784 492 aa6.4□□□□□ -1.39
CDH17-201ENST00000027335 SHPRHQ149N8 1683 aa6.4□□□□□ -1.39
CDH17-201ENST00000027335 CDC42BPBQ9Y5S2 1711 aa6.4□□□□□ -1.39
CDH17-201ENST00000027335 FAM135BQ49AJ0 1406 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 CEBPAP49715 358 aaPredicted RBP6.39□□□□□ -1.39
CDH17-201ENST00000027335 ATP7AQ04656 1500 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 XIRP1Q702N8 1843 aaKnown RBP6.39□□□□□ -1.39
CDH17-201ENST00000027335 SOX12O15370 315 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 HOXD11P31277 338 aaPredicted RBP6.39□□□□□ -1.39
CDH17-201ENST00000027335 CCDC146Q8IYE0 955 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 LAS1LQ9Y4W2 734 aaKnown RBP6.39□□□□□ -1.39
CDH17-201ENST00000027335 CCDC7Q96M83 1385 aa6.39□□□□□ -1.39
CDH17-201ENST00000027335 MBD5Q9P267 1494 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 MORC1Q86VD1 984 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 BRPF3Q9ULD4 1205 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 CLTCQ00610 1675 aaKnown RBP6.38□□□□□ -1.39
CDH17-201ENST00000027335 NWD1Q149M9 1564 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 CFAP53Q96M91 514 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 RALBP1Q15311 655 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 NLRP13Q86W25 1043 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 RCAN3Q9UKA8 241 aa6.38□□□□□ -1.39
CDH17-201ENST00000027335 NUDCQ9Y266 331 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 MINK1Q8N4C8 1332 aaPredicted RBP6.37□□□□□ -1.39
CDH17-201ENST00000027335 PZPP20742 1482 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 CFAP65Q6ZU64 1925 aaKnown RBP6.37□□□□□ -1.39
CDH17-201ENST00000027335 STRCP1A6NGW2 1772 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 PLIN1O60240 522 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 DHX29Q7Z478 1369 aaKnown RBP6.37□□□□□ -1.39
CDH17-201ENST00000027335 ZFP91Q96JP5 570 aaPredicted RBP6.37□□□□□ -1.39
CDH17-201ENST00000027335 ADGRF5Q8IZF2 1346 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 IDI1Q13907 227 aa6.37□□□□□ -1.39
CDH17-201ENST00000027335 RPRD2Q5VT52 1461 aaKnown RBP6.36□□□□□ -1.39
CDH17-201ENST00000027335 ZBTB22O15209 634 aa6.36□□□□□ -1.39
CDH17-201ENST00000027335 LRRC7Q96NW7 1537 aa6.36□□□□□ -1.39
CDH17-201ENST00000027335 VGFO15240 615 aaPredicted RBP6.36□□□□□ -1.39
CDH17-201ENST00000027335 SAMD9LQ8IVG5 1584 aa6.36□□□□□ -1.39
CDH17-201ENST00000027335 UBAP1LF5GYI3 381 aa6.36□□□□□ -1.39
CDH17-201ENST00000027335 CAPN15O75808 1086 aa6.35□□□□□ -1.39
CDH17-201ENST00000027335 PTMSP20962 102 aa6.35□□□□□ -1.39
CDH17-201ENST00000027335 NAP1L2Q9ULW6 460 aaPredicted RBP6.35□□□□□ -1.39
CDH17-201ENST00000027335 RRP7AQ9Y3A4 280 aaKnown RBP6.35□□□□□ -1.39
CDH17-201ENST00000027335 ERBINQ96RT1 1412 aa6.35□□□□□ -1.39
CDH17-201ENST00000027335 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
CDH17-201ENST00000027335 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDH17-201ENST00000027335 NCOA3Q9Y6Q9 1424 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 MYBBP1AQ9BQG0 1328 aaKnown RBP6.34□□□□□ -1.39
CDH17-201ENST00000027335 MAPK8IP3Q9UPT6 1336 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 CDC42BPAQ5VT25 1732 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 HSPA1LP34931 641 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 UPF2Q9HAU5 1272 aaKnown RBP6.34□□□□□ -1.39
CDH17-201ENST00000027335 SLIT1O75093 1534 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 NHSL1Q5SYE7 1610 aa6.34□□□□□ -1.39
CDH17-201ENST00000027335 ZBED9Q6R2W3 1325 aa6.34□□□□□ -1.4
CDH17-201ENST00000027335 LMOD2Q6P5Q4 547 aa6.34□□□□□ -1.4
CDH17-201ENST00000027335 FTSJ3Q8IY81 847 aaKnown RBP6.34□□□□□ -1.4
CDH17-201ENST00000027335 SLC26A8Q96RN1 970 aa6.34□□□□□ -1.4
CDH17-201ENST00000027335 CABP2Q9NPB3 220 aa6.34□□□□□ -1.4
CDH17-201ENST00000027335 PRDM10Q9NQV6 1147 aa6.34□□□□□ -1.4
CDH17-201ENST00000027335 AHDC1Q5TGY3 1603 aaPredicted RBP6.33□□□□□ -1.4
CDH17-201ENST00000027335 A2MP01023 1474 aa6.33□□□□□ -1.4
CDH17-201ENST00000027335 RTEL1-TNFRSF6BF6WH68 1400 aa6.33□□□□□ -1.4
CDH17-201ENST00000027335 EIF2AK4Q9P2K8 1649 aaKnown RBP6.33□□□□□ -1.4
CDH17-201ENST00000027335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH17-201ENST00000027335 EXOC6Q8TAG9 804 aa6.33□□□□□ -1.4
CDH17-201ENST00000027335 ZNF526Q8TF50 670 aaPredicted RBP6.33□□□□□ -1.4
CDH17-201ENST00000027335 ARHGAP23Q9P227 1491 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 HSP90AA1P07900 732 aaKnown RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 CNPY4Q8N129 248 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 CLUAP1Q96AJ1 413 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 SPINK5Q9NQ38 1064 aaPredicted RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 DUOX2Q9NRD8 1548 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 ADGRL2O95490 1459 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 SLC12A5Q9H2X9 1139 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 LAMC1P11047 1609 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 RBM33Q96EV2 1170 aaKnown RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 CDCA7LQ96GN5 454 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms