RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Ccdc173A0JLY1 547 aa14.18□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Psma5Q9Z2U1 241 aaKnown RBP14.18□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Gprasp1Q5U4C1 1347 aa14.18□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Rsph6aQ8CDR2 708 aa14.17□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Atl3Q91YH5 541 aa14.17□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Sirt1Q923E4 737 aa14.17□□□□□ -0.14
Scn8a-208ENSMUST00000200963 NaspQ99MD9 773 aaKnown RBP14.17□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Rnf214Q8BFU3 668 aaKnown RBP14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Shroom4Q1W617 1475 aa14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Rpgrip1lQ8CG73 1264 aa14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Cetn4Q8K4K1 168 aa14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 EzrP26040 586 aaKnown RBP14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Anp32eP97822 260 aaKnown RBP14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Ints3Q7TPD0 1041 aaKnown RBP14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Commd10Q8JZY2 202 aa14.16□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Gm10471E9Q1C7 252 aa14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Dusp9Q7TNL7 452 aa14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Pdcl3Q8BVF2 240 aa14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Rbm28Q8CGC6 750 aaKnown RBP14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 PnisrA2AJT4 805 aaKnown RBP14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 TatQ8QZR1 454 aa14.15□□□□□ -0.14
Scn8a-208ENSMUST00000200963 Rad54l2Q99NG0 1466 aa14.14□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Atf3Q60765 181 aa14.14□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Lrrcc1Q69ZB0 1026 aa14.14□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Pip4k2bQ80XI4 416 aa14.14□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Ccdc96Q9CR92 584 aa14.14□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Ncoa2Q61026 1462 aa14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Hap1O35668 628 aa14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Agtpbp1Q641K1 1218 aa14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Ccdc183A2AJB1 534 aa14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Gnl3lQ6PGG6 577 aaKnown RBP14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Rbm5Q91YE7 815 aaKnown RBP14.13□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Tdrd9Q14BI7 1383 aa14.12□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Phldb1Q6PDH0 1371 aaKnown RBP14.12□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Stk11ipQ3TAA7 1072 aa14.12□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Podxl2Q8CAE9 603 aa14.12□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Kif3cO35066 796 aa14.11□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Chaf1aQ9QWF0 911 aa14.11□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Soga1E1U8D0 1418 aa14.11□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Klf15Q9EPW2 415 aa14.11□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Pabpn1Q8CCS6 302 aaKnown RBP14.11□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Smg7Q5RJH6 1138 aaKnown RBP14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Tmc1Q8R4P5 757 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Cep89Q9CZX2 791 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Kcnh8P59111 1102 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Odf2lQ9D478 642 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Cnnm1Q0GA42 951 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Mns1Q61884 491 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 TefQ9JLC6 301 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Smc2Q8CG48 1191 aaKnown RBP14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Puf60Q3UEB3 564 aaKnown RBP14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Babam1Q3UI43 333 aa14.1□□□□□ -0.15
Scn8a-208ENSMUST00000200963 AcrbpQ3V140 540 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Zkscan2G3X952 960 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Dctn1O08788 1281 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Q9D9H8 365 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Atp2b2Q9R0K7 1198 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 CftrP26361 1476 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Plekhh1Q80TI1 1356 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Zranb3Q6NZP1 1069 aa14.09□□□□□ -0.15
Scn8a-208ENSMUST00000200963 FanciQ8K368 1330 aa14.08□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Sf3b2Q3UJB0 878 aaKnown RBP14.08□□□□□ -0.15
Scn8a-208ENSMUST00000200963 SkilQ60665 675 aa14.08□□□□□ -0.15
Scn8a-208ENSMUST00000200963 AnlnQ8K298 1121 aaKnown RBP14.08□□□□□ -0.15
Scn8a-208ENSMUST00000200963 Mcm2P97310 904 aa14.08□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Ppp2r3aB2RXC8 1150 aa14.08□□□□□ -0.16
Scn8a-208ENSMUST00000200963 IkQ9Z1M8 557 aaKnown RBP14.08□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Nsd2Q8BVE8 1365 aa14.08□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Prkrip1Q9CWV6 186 aaKnown RBP14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Sel1lQ9Z2G6 790 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Ccdc171E9Q1U1 1324 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Fmnl2A2APV2 1086 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Washc4Q3UMB9 1173 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Erich4Q3UNU4 136 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 MpripP97434 1024 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 SelenooQ9DBC0 667 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 PdcQ9QW08 244 aa14.07□□□□□ -0.16
Scn8a-208ENSMUST00000200963 LrpprcQ6PB66 1392 aaKnown RBP14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Cdkn1cP49919 348 aa14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Ehmt1Q5DW34 1296 aa14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Fkbp4P30416 458 aa14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Stk38Q91VJ4 465 aa14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Fam13bQ8K2H3 851 aa14.06□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Cwc15Q9JHS9 229 aaKnown RBP14.05□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Erc1Q99MI1 1120 aa14.05□□□□□ -0.16
Scn8a-208ENSMUST00000200963 HypkQ9CR41 129 aa14.05□□□□□ -0.16
Scn8a-208ENSMUST00000200963 1700010I14RikQ7TPG0 532 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 OptnQ8K3K8 584 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Prl7d1P04769 244 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 NefhP19246 1090 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Themis2Q91YX0 663 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Jph4Q80WT0 628 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Synj1Q8CHC4 1574 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Ttll13A4Q9F6 804 aa14.04□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Q9D9S1 216 aa14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Cux1P53564 1515 aa14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Gnai2P08752 355 aaKnown RBP14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Nol8Q3UHX0 1147 aaKnown RBP14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Tmco3Q8BH01 678 aa14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Dhx29Q6PGC1 1365 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms