RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 Rab3gap2Q8BMG7 1366 aa19.56■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Prdm16A2A935 1275 aa19.56■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Stard8Q8K031 1019 aa19.56■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Polr3aB2RXC6 1390 aa19.55■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Znf608Q56A10 1511 aa19.55■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 PtprgQ05909 1442 aa19.55■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Fam208aQ69ZR9 1610 aaKnown RBP19.55■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Adgrl2Q8JZZ7 1487 aa19.55■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Gm20521D3Z5F7 333 aa19.54■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Trpm2Q91YD4 1506 aa19.54■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Apaf1O88879 1249 aa19.54■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Mbd5B1AYB6 1498 aa19.53■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Tbc1d32Q3URV1 1296 aa19.53■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Cog6Q8R3I3 657 aa19.53■□□□□ 0.72
Smarcc1-204ENSMUST00000197984 Tmc1Q8R4P5 757 aa19.52■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Asxl1P59598 1514 aa19.51■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Tfip11Q9ERA6 838 aaKnown RBP19.51■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 AI481877A2ALV5 1481 aa19.5■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Kif21bQ9QXL1 1668 aa19.5■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Ythdc2B2RR83 1445 aaKnown RBP19.5■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Dhx16G3X8X0 1044 aaKnown RBP19.49■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Tnnt2P50752 301 aa19.49■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Rsph3aQ3UFY4 516 aa19.49■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Dot1lQ6XZL8 1540 aa19.49■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Ralbp1Q62172 648 aa19.48■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Fbxo2Q80UW2 297 aa19.48■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 DroshaQ5HZJ0 1373 aaKnown RBP19.48■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Tpm2P58774 284 aa19.48■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Map7O88735 730 aa19.47■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Fan1Q69ZT1 1020 aa19.47■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 TimelessQ9R1X4 1197 aa19.47■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Srpk2O54781 681 aaKnown RBP19.47■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Cpsf1Q9EPU4 1441 aaKnown RBP19.47■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Tmco5bQ80X59 307 aa19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Chmp4cQ9D7F7 232 aa19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 U2af1Q9D883 239 aaKnown RBP19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Erbb4Q61527 1308 aa19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Vgll3P85442 326 aa19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Rnf214Q8BFU3 668 aaKnown RBP19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 Kif18aQ91WD7 886 aa19.46■□□□□ 0.71
Smarcc1-204ENSMUST00000197984 AU019823E9PUQ3 292 aa19.45■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Tex2Q6ZPJ0 1128 aaKnown RBP19.45■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Ripk4Q9ERK0 786 aa19.45■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Tarbp1E9Q368 1579 aa19.44■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Gm32742A0A1B0GT42 1604 aa19.44■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Ccdc146E9Q9F7 977 aa19.43■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Ush1cQ9ES64 910 aa19.43■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Nsd2Q8BVE8 1365 aa19.43■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Clcn1Q64347 994 aa19.42■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Pank2Q3U4S0 443 aa19.41■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Atp1b4Q99ME6 356 aa19.41■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Dhx30Q99PU8 1217 aaKnown RBP19.41■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Cfap74Q3UY96 1578 aa19.4■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Tex14Q7M6U3 1450 aa19.4■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Igf1rQ60751 1373 aa19.4■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Rnf17Q99MV7 1640 aa19.39■□□□□ 0.7
Smarcc1-204ENSMUST00000197984 Uspl1Q3ULM6 1089 aa19.39■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Gtf2e1Q9D0D5 440 aa19.38■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Ttc41Q692V3 1318 aa19.38■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Usp19Q3UJD6 1360 aa19.38■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Atl3Q91YH5 541 aa19.38■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Kif2cQ922S8 721 aa19.38■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 KnstrnQ9D9Z1 312 aaKnown RBP19.37■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Becn1O88597 448 aa19.37■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Ccdc60Q8C4J0 545 aa19.37■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Gys2Q8VCB3 704 aa19.37■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Rbm27Q5SFM8 1060 aaKnown RBP19.36■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 GsdmaQ9EST1 446 aa19.36■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Nek4Q9Z1J2 792 aa19.36■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Edc4Q3UJB9 1406 aaKnown RBP19.36■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Usp40Q8BWR4 1235 aa19.36■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Ddit3P35639 168 aa19.35■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Fam13bQ8K2H3 851 aa19.35■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Ccar1Q8CH18 1146 aaKnown RBP19.35■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 NhsB1AV60 1647 aa19.35■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Phlpp2Q8BXA7 1320 aa19.35■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Chd1P40201 1711 aa19.34■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Ttc21bQ0HA38 1315 aa19.33■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 ErbinQ80TH2 1402 aa19.33■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Bloc1s4Q8VED2 215 aa19.33■□□□□ 0.69
Smarcc1-204ENSMUST00000197984 Cdc42bpbQ7TT50 1713 aa19.33■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Gpatch11Q3UFS4 262 aa19.33■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Tsen2Q6P7W5 460 aa19.33■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Maco1Q7TQE6 664 aaKnown RBP19.33■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Pabpn1Q8CCS6 302 aaKnown RBP19.33■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Kdm5cP41230 1554 aa19.32■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Casq1O09165 405 aa19.31■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Usp54Q8BL06 1588 aaKnown RBP19.31■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Mast1Q9R1L5 1570 aa19.31■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Abcc3B2RX12 1523 aa19.3■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 PtprtQ99M80 1454 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Plch2A2AP18 1501 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Gzf1Q4VBD9 706 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Bag4Q8CI61 457 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Stag3O70576 1240 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Gse1Q3U3C9 1213 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 SkilQ60665 675 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Samd1D3YXK1 519 aa19.29■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Rasa1E9PYG6 1038 aa19.28■□□□□ 0.68
Smarcc1-204ENSMUST00000197984 Cers3Q1A3B0 383 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms