RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Cdk19Q8BWD8 501 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Sbno1Q689Z5 1390 aa13.02□□□□□ -0.32
Usp4-209ENSMUST00000194959 4933416C03RikQ3V063 378 aa13.02□□□□□ -0.32
Usp4-209ENSMUST00000194959 Xrn1P97789 1719 aaKnown RBP13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Nectin2P32507 530 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Robo2Q7TPD3 1470 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Uspl1Q3ULM6 1089 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Ralbp1Q62172 648 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Yeats2Q3TUF7 1407 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Gsto1O09131 240 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Sox12Q04890 314 aa13.01□□□□□ -0.33
Usp4-209ENSMUST00000194959 Kiaa1107Q80TK0 1369 aa13□□□□□ -0.33
Usp4-209ENSMUST00000194959 Dusp27Q148W8 1138 aa13□□□□□ -0.33
Usp4-209ENSMUST00000194959 Cfap65Q3V0B4 1847 aa13□□□□□ -0.33
Usp4-209ENSMUST00000194959 Plch2A2AP18 1501 aa12.99□□□□□ -0.33
Usp4-209ENSMUST00000194959 Hsp90ab1P11499 724 aaKnown RBP12.99□□□□□ -0.33
Usp4-209ENSMUST00000194959 U2surpQ6NV83 1029 aaKnown RBP12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Ppp1r3fQ9JIG4 799 aa12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Hecw1Q8K4P8 1604 aa12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Abca9Q8K449 1623 aa12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Pibf1E9Q6K3 756 aa12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Mbd3Q9Z2D8 285 aaKnown RBP12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 Usp19Q3UJD6 1360 aa12.98□□□□□ -0.33
Usp4-209ENSMUST00000194959 AnkarA2RT91 1465 aa12.97□□□□□ -0.33
Usp4-209ENSMUST00000194959 Irx6Q9ER75 438 aa12.97□□□□□ -0.33
Usp4-209ENSMUST00000194959 Ccdc60Q8C4J0 545 aa12.97□□□□□ -0.33
Usp4-209ENSMUST00000194959 Nphp4P59240 1425 aa12.97□□□□□ -0.33
Usp4-209ENSMUST00000194959 Depdc5P61460 1591 aa12.96□□□□□ -0.33
Usp4-209ENSMUST00000194959 Slc52a2Q9D8F3 450 aa12.96□□□□□ -0.33
Usp4-209ENSMUST00000194959 Ccdc27Q3V036 639 aa12.95□□□□□ -0.34
Usp4-209ENSMUST00000194959 Eif2s2Q99L45 331 aaKnown RBP12.95□□□□□ -0.34
Usp4-209ENSMUST00000194959 Setd1aE9PYH6 1716 aa12.95□□□□□ -0.34
Usp4-209ENSMUST00000194959 Neurl4Q5NCX5 1563 aa12.95□□□□□ -0.34
Usp4-209ENSMUST00000194959 Mcm10Q0VBD2 885 aa12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 KarsQ99MN1 595 aaKnown RBP12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Ak7Q9D2H2 614 aa12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Sart3Q9JLI8 962 aaKnown RBP12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Prrc2bQ7TPM1 1486 aaKnown RBP12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Atf7ipQ7TT18 1306 aa12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Slc12a5Q91V14 1138 aa12.94□□□□□ -0.34
Usp4-209ENSMUST00000194959 Myo5cE9Q1F5 1742 aa12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 Lrrc7Q80TE7 1490 aa12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 NudcO35685 332 aaKnown RBP12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 Trim58Q5NCC9 485 aa12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 PalmQ9Z0P4 383 aa12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 Ccar1Q8CH18 1146 aaKnown RBP12.93□□□□□ -0.34
Usp4-209ENSMUST00000194959 Kiaa1210E9Q0C6 1637 aa12.92□□□□□ -0.34
Usp4-209ENSMUST00000194959 MyclP10166 368 aa12.92□□□□□ -0.34
Usp4-209ENSMUST00000194959 NinlQ6ZQ12 1394 aa12.92□□□□□ -0.34
Usp4-209ENSMUST00000194959 HnrnpmQ9D0E1 729 aaKnown RBP12.91□□□□□ -0.34
Usp4-209ENSMUST00000194959 Bcl11aQ9QYE3 773 aa12.91□□□□□ -0.34
Usp4-209ENSMUST00000194959 IbtkQ6ZPR6 1352 aaKnown RBP12.91□□□□□ -0.34
Usp4-209ENSMUST00000194959 Prex1Q69ZK0 1650 aa12.91□□□□□ -0.34
Usp4-209ENSMUST00000194959 Rbm25B2RY56 838 aaKnown RBP12.91□□□□□ -0.34
Usp4-209ENSMUST00000194959 PalldQ9ET54 1408 aa12.9□□□□□ -0.34
Usp4-209ENSMUST00000194959 Dnai1Q8C0M8 701 aa12.9□□□□□ -0.34
Usp4-209ENSMUST00000194959 Map4k4P97820 1233 aaKnown RBP12.9□□□□□ -0.34
Usp4-209ENSMUST00000194959 Rlbp1Q9Z275 317 aa12.9□□□□□ -0.34
Usp4-209ENSMUST00000194959 Iqgap3F8VQ29 1632 aa12.9□□□□□ -0.34
Usp4-209ENSMUST00000194959 Duxf3A0A0N4SV92 674 aa12.9□□□□□ -0.35
Usp4-209ENSMUST00000194959 Smc5Q8CG46 1101 aaKnown RBP12.9□□□□□ -0.35
Usp4-209ENSMUST00000194959 Uggt2E9Q4X2 1504 aa12.89□□□□□ -0.35
Usp4-209ENSMUST00000194959 Skint5A7XUY5 1461 aa12.89□□□□□ -0.35
Usp4-209ENSMUST00000194959 Kdm2bQ6P1G2 1309 aa12.89□□□□□ -0.35
Usp4-209ENSMUST00000194959 Dnajc5gQ8C632 165 aa12.89□□□□□ -0.35
Usp4-209ENSMUST00000194959 Kdm5aQ3UXZ9 1690 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Pola1P33609 1465 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Scaf11E9PZM7 1456 aaKnown RBP12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Abca17E9PX95 1733 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Pnmal2G3X9N3 661 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Cabp2Q9JLK4 216 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Tubgcp6G5E8P0 1769 aa12.88□□□□□ -0.35
Usp4-209ENSMUST00000194959 Spryd3E9Q9B3 442 aa12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 Rims1Q99NE5 1463 aa12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 InsrP15208 1372 aa12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 MpripP97434 1024 aa12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 G3bp1P97855 465 aaKnown RBP12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 Ipo8Q7TMY7 1010 aa12.87□□□□□ -0.35
Usp4-209ENSMUST00000194959 Iqcf3Q9D498 203 aa12.86□□□□□ -0.35
Usp4-209ENSMUST00000194959 Mfap1aC0HKD8 439 aaKnown RBP12.86□□□□□ -0.35
Usp4-209ENSMUST00000194959 Mfap1bC0HKD9 439 aaKnown RBP12.86□□□□□ -0.35
Usp4-209ENSMUST00000194959 Aplp1Q03157 653 aa12.86□□□□□ -0.35
Usp4-209ENSMUST00000194959 DiexfQ8BTT6 772 aaKnown RBP12.86□□□□□ -0.35
Usp4-209ENSMUST00000194959 Fndc1E9Q043 1732 aa12.85□□□□□ -0.35
Usp4-209ENSMUST00000194959 Hsp90aa1P07901 733 aaKnown RBP12.85□□□□□ -0.35
Usp4-209ENSMUST00000194959 Klhdc4Q921I2 584 aa12.85□□□□□ -0.35
Usp4-209ENSMUST00000194959 Cavin4A2AMM0 362 aa12.85□□□□□ -0.35
Usp4-209ENSMUST00000194959 Efcab6Q6P1E8 1516 aa12.84□□□□□ -0.35
Usp4-209ENSMUST00000194959 Maco1Q7TQE6 664 aaKnown RBP12.84□□□□□ -0.35
Usp4-209ENSMUST00000194959 Dip2cE9PWR4 1557 aa12.84□□□□□ -0.35
Usp4-209ENSMUST00000194959 Ccdc183A2AJB1 534 aa12.84□□□□□ -0.35
Usp4-209ENSMUST00000194959 Adgrb3Q80ZF8 1522 aa12.84□□□□□ -0.35
Usp4-209ENSMUST00000194959 Ppm1gQ61074 542 aa12.83□□□□□ -0.36
Usp4-209ENSMUST00000194959 Usp16Q99LG0 825 aa12.83□□□□□ -0.36
Usp4-209ENSMUST00000194959 Swt1Q9DBQ9 907 aa12.83□□□□□ -0.36
Usp4-209ENSMUST00000194959 Talpid3E9PV87 1520 aa12.82□□□□□ -0.36
Usp4-209ENSMUST00000194959 Gprasp1Q5U4C1 1347 aa12.82□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cep152A2AUM9 1736 aaKnown RBP12.81□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cabp4Q8VHC5 271 aa12.81□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cep170bQ80U49 1574 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 71 ms