RNA–Protein interactions for RNA: ENSMUST00000179226.7

Col4a3bp-203, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 3,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-203ENSMUST00000179226 Ppp1r3fQ9JIG4 799 aa20.56■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Fam208aQ69ZR9 1610 aaKnown RBP20.56■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Rfx1P48377 963 aa20.56■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Col17a1Q07563 1470 aa20.55■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Kif2cQ922S8 721 aa20.55■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Nsfl1cQ9CZ44 370 aaKnown RBP20.55■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Pabpn1Q8CCS6 302 aaKnown RBP20.55■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 PtprtQ99M80 1454 aa20.53■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Cnga1P29974 684 aa20.53■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 IbspQ61711 324 aa20.53■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Map3k5O35099 1380 aa20.52■□□□□ 0.88
Col4a3bp-203ENSMUST00000179226 Ksr2Q3UVC0 959 aa20.5■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Ddit3P35639 168 aa20.5■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Rbm10Q99KG3 930 aaKnown RBP20.5■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Sall3Q62255 1320 aa20.49■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Chrna2Q91X60 512 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Adgrl2Q8JZZ7 1487 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Tulp4Q9JIL5 1547 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Phlpp2Q8BXA7 1320 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 NhsB1AV60 1647 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 AU019823E9PUQ3 292 aa20.48■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Irf5P56477 497 aa20.46■□□□□ 0.87
Col4a3bp-203ENSMUST00000179226 Fam135bQ9DAI6 1403 aa20.45■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Dmrtc1Q9D9R7 182 aa20.44■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Atl3Q91YH5 541 aa20.44■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Znf330Q922H9 316 aa20.44■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Kdm5aQ3UXZ9 1690 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Gm20521D3Z5F7 333 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Apaf1O88879 1249 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Ppip5k1A2ARP1 1436 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Myom2Q14BI5 1463 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Pdia4P08003 638 aaKnown RBP20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Aplp1Q03157 653 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Dusp27Q148W8 1138 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Gtf3c5Q8R2T8 520 aa20.43■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Edc4Q3UJB9 1406 aaKnown RBP20.42■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Igf1rQ60751 1373 aa20.42■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Cog6Q8R3I3 657 aa20.42■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Gm32742A0A1B0GT42 1604 aa20.41■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Dhx16G3X8X0 1044 aaKnown RBP20.41■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Cep170Q6A065 1588 aa20.41■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Erbb4Q61527 1308 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Kif18aQ91WD7 886 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Pola1P33609 1465 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Pde4cQ3UEI1 686 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Clcn1Q64347 994 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Tex2Q6ZPJ0 1128 aaKnown RBP20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Ddrgk1Q80WW9 315 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Spag9Q58A65 1321 aaKnown RBP20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Gtf2e1Q9D0D5 440 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 P2rx7Q9Z1M0 595 aa20.4■□□□□ 0.86
Col4a3bp-203ENSMUST00000179226 Rnf17Q99MV7 1640 aa20.38■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Erich6bQ9D4S6 220 aa20.38■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 BccipQ9CWI3 316 aa20.38■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 GsdmaQ9EST1 446 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Rsph3aQ3UFY4 516 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Map7O88735 730 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Tpm2P58774 284 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Map4k4P97820 1233 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 GorabQ8BRM2 368 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Ripk4Q9ERK0 786 aa20.37■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Abca8bQ8K440 1620 aa20.36■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Fan1Q69ZT1 1020 aa20.36■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Usp40Q8BWR4 1235 aa20.36■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Zfp91Q62511 572 aa20.35■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Itsn2Q9Z0R6 1659 aa20.35■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Tfip11Q9ERA6 838 aaKnown RBP20.35■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Gm156Q58A37 223 aa20.34■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Ecm2Q5FW85 670 aa20.33■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Isy1Q69ZQ2 285 aaKnown RBP20.33■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Nutm1Q8BHP2 1126 aa20.33■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Ccar1Q8CH18 1146 aaKnown RBP20.33■□□□□ 0.85
Col4a3bp-203ENSMUST00000179226 Mast1Q9R1L5 1570 aa20.33■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Cfap74Q3UY96 1578 aa20.33■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Abcc6Q9R1S7 1498 aa20.32■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Lemd3Q9WU40 921 aa20.32■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Kif3bQ61771 747 aa20.32■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 U2af1Q9D883 239 aaKnown RBP20.32■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Scaf1Q5U4C3 1256 aaKnown RBP20.3■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Cdc42bpbQ7TT50 1713 aa20.3■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Nectin2P32507 530 aa20.3■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Maco1Q7TQE6 664 aaKnown RBP20.3■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Myom1Q62234 1667 aaKnown RBP20.3■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Rbm25B2RY56 838 aaKnown RBP20.29■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Iqsec2Q5DU25 1478 aa20.29■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 VgfQ0VGU4 617 aa20.29■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Stk11ipQ3TAA7 1072 aa20.29■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Stk24Q99KH8 431 aa20.29■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Gm10093D3YYI8 482 aa20.28■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Hdac1O09106 482 aaKnown RBP20.28■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 IbtkQ6ZPR6 1352 aaKnown RBP20.28■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Abcc3B2RX12 1523 aa20.28■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Srpk2O54781 681 aaKnown RBP20.28■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Prdm16A2A935 1275 aa20.27■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 AI481877A2ALV5 1481 aa20.27■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 Kiaa1210E9Q0C6 1637 aa20.27■□□□□ 0.84
Col4a3bp-203ENSMUST00000179226 SkilQ60665 675 aa20.27■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Znf316Q6PGE4 1016 aa20.27■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Bloc1s4Q8VED2 215 aa20.27■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 PtmaP26350 111 aa20.26■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms