RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Kcnj4P52189 445 aa13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 MlecQ6ZQI3 291 aaKnown RBP13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 Bag1Q60739 355 aa13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Trak1Q6PD31 939 aa13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 G3bp1P97855 465 aaKnown RBP13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Hnrnpul1Q8VDM6 859 aaKnown RBP13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Ipo4Q8VI75 1082 aa13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Olr1Q9EQ09 363 aa13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 PnisrA2AJT4 805 aaKnown RBP13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Cyp26c1B2RXA7 518 aa13.72□□□□□ -0.21
Cux1-204ENSMUST00000175975 Rbm28Q8CGC6 750 aaKnown RBP13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 Exoc6Q8R313 802 aa13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 Ccdc60Q8C4J0 545 aa13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 Cdkl5Q3UTQ8 938 aa13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 Cep131Q62036 1060 aa13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 Ccdc83Q9D4V3 305 aa13.71□□□□□ -0.21
Cux1-204ENSMUST00000175975 GsdmaQ9EST1 446 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Washc2Q6PGL7 1334 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 IncenpQ9WU62 880 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Jakmip2D3YXK0 820 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Rpap1Q80TE0 1409 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Slc13a4Q8BZ82 625 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Mphosph9A6H5Y1 991 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Trim58Q5NCC9 485 aa13.7□□□□□ -0.22
Cux1-204ENSMUST00000175975 Pibf1E9Q6K3 756 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Nol7Q9D7Z3 254 aaKnown RBP13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Lmbr1Q9JIT0 490 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 A0A0U1RNP2 1173 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Utp14aQ640M1 767 aaKnown RBP13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Pds5bQ4VA53 1446 aaKnown RBP13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ccnb3Q810T2 1396 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 FanciQ8K368 1330 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Lrrfip2Q91WK0 415 aa13.69□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ncoa2Q61026 1462 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 Adck5Q80V03 582 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 Neurod6P48986 337 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 Tango6Q8C3S2 1079 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 CrbnQ8C7D2 445 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 Homer1Q9Z2Y3 366 aa13.68□□□□□ -0.22
Cux1-204ENSMUST00000175975 Gnai1B2RSH2 354 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Polr3gQ6NXY9 223 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Gnai3Q9DC51 354 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ccdc171E9Q1U1 1324 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Hspa5P20029 655 aaKnown RBP13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Sept6Q9R1T4 434 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ppfibp2O35711 882 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Hdgfl1Q2VPR5 283 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 MicalclQ9D5U9 680 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 Cfap45Q9D9U9 551 aa13.67□□□□□ -0.22
Cux1-204ENSMUST00000175975 NefhP19246 1090 aa13.66□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ccdc191J3QQ27 883 aa13.66□□□□□ -0.22
Cux1-204ENSMUST00000175975 ScaperF8VQ70 1398 aaKnown RBP13.66□□□□□ -0.22
Cux1-204ENSMUST00000175975 Smtnl1Q99LM3 459 aa13.66□□□□□ -0.22
Cux1-204ENSMUST00000175975 Cetn1P41209 172 aa13.66□□□□□ -0.22
Cux1-204ENSMUST00000175975 Stxbp4Q9WV89 557 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Fyb1O35601 819 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Cavin1O54724 392 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Sel1lQ9Z2G6 790 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Phactr2B1AVP0 632 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Rsph6aQ8CDR2 708 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Ccar2Q8VDP4 922 aaKnown RBP13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Sirt1Q923E4 737 aa13.65□□□□□ -0.22
Cux1-204ENSMUST00000175975 Agtpbp1Q641K1 1218 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Erlin1Q91X78 346 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ccdc112A0AUP1 442 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 BbxQ8VBW5 907 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Smg6P61406 1418 aaKnown RBP13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Cux2P70298 1426 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Spag5Q7TME2 1165 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Eif3j1Q3UGC7 261 aaKnown RBP13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Eif3j2Q66JS6 263 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Larp1Q6ZQ58 1072 aaKnown RBP13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 CactinQ9CS00 772 aaKnown RBP13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Rhot2Q8JZN7 620 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Znf287Q9EQB9 759 aa13.64□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gtf2f1Q3THK3 508 aaKnown RBP13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Kif3bQ61771 747 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Egfem1Q8C088 590 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Cfap57Q9D180 1249 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Wasf1Q8R5H6 559 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Mad1l1Q9WTX8 717 aaKnown RBP13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Rab3il1Q8VDV3 383 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Zfp853A0A1D5RM95 733 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Plekhd1B2RPU2 505 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Map2k1P31938 393 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 TbcaP48428 108 aaKnown RBP13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Abcd1P48410 736 aa13.63□□□□□ -0.23
Cux1-204ENSMUST00000175975 Zpr1Q62384 459 aa13.62□□□□□ -0.23
Cux1-204ENSMUST00000175975 Rrp9Q91WM3 475 aaKnown RBP13.62□□□□□ -0.23
Cux1-204ENSMUST00000175975 IkQ9Z1M8 557 aaKnown RBP13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Med4Q9CQA5 270 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Sept7O55131 436 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gbp8Q2V6D6 525 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Shtn1Q8K2Q9 631 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gm7361D3Z6R1 267 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Atf3Q60765 181 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Chrna2Q91X60 512 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Aebp1Q640N1 1128 aa13.61□□□□□ -0.23
Cux1-204ENSMUST00000175975 Fermt1P59113 677 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Krt84Q99M73 603 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms