Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm25239-201ENSMUST00000174915 86 ntBASIC42.56■■■■■ 4.4
Cdkl5Q3UTQ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Cdkl5Q3UTQ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Cdkl5Q3UTQ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Cdkl5Q3UTQ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Cdkl5Q3UTQ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.45■■■■□ 3.75
Cdkl5Q3UTQ8 Gm15042-201ENSMUST00000120212 883 ntBASIC37.85■■■■□ 3.65
Cdkl5Q3UTQ8 Gm15045-201ENSMUST00000117359 883 ntBASIC37.08■■■■□ 3.53
Cdkl5Q3UTQ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Cdkl5Q3UTQ8 Psd-208ENSMUST00000224556 2034 ntBASIC36.91■■■■□ 3.5
Cdkl5Q3UTQ8 Gm24109-201ENSMUST00000175489 103 ntBASIC36.58■■■■□ 3.45
Cdkl5Q3UTQ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Cdkl5Q3UTQ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
Cdkl5Q3UTQ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.35■■■■□ 3.41
Cdkl5Q3UTQ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Cdkl5Q3UTQ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
Cdkl5Q3UTQ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Cdkl5Q3UTQ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
Cdkl5Q3UTQ8 Gm23366-201ENSMUST00000175022 89 ntBASIC35.68■■■■□ 3.3
Cdkl5Q3UTQ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
Cdkl5Q3UTQ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Cdkl5Q3UTQ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Cdkl5Q3UTQ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Cdkl5Q3UTQ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.53■■■■□ 3.28
Cdkl5Q3UTQ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
Cdkl5Q3UTQ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Cdkl5Q3UTQ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.41■■■■□ 3.26
Cdkl5Q3UTQ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Cdkl5Q3UTQ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Cdkl5Q3UTQ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Cdkl5Q3UTQ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Cdkl5Q3UTQ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.04■■■■□ 3.2
Cdkl5Q3UTQ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Cdkl5Q3UTQ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Cdkl5Q3UTQ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
Cdkl5Q3UTQ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cdkl5Q3UTQ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.72■■■■□ 3.15
Cdkl5Q3UTQ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Cdkl5Q3UTQ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Cdkl5Q3UTQ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.45■■■■□ 3.11
Cdkl5Q3UTQ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Cdkl5Q3UTQ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Cdkl5Q3UTQ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.05■■■■□ 3.04
Cdkl5Q3UTQ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Cdkl5Q3UTQ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.03■■■■□ 3.04
Cdkl5Q3UTQ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
Cdkl5Q3UTQ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Cdkl5Q3UTQ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Cdkl5Q3UTQ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.78■■■■□ 3
Cdkl5Q3UTQ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Cdkl5Q3UTQ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Cdkl5Q3UTQ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Cdkl5Q3UTQ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cdkl5Q3UTQ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cdkl5Q3UTQ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Cdkl5Q3UTQ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Cdkl5Q3UTQ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cdkl5Q3UTQ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.43■■■□□ 2.94
Cdkl5Q3UTQ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cdkl5Q3UTQ8 Gm25238-201ENSMUST00000174914 89 ntBASIC33.36■■■□□ 2.93
Cdkl5Q3UTQ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cdkl5Q3UTQ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.35■■■□□ 2.93
Cdkl5Q3UTQ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.35■■■□□ 2.93
Cdkl5Q3UTQ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.29■■■□□ 2.92
Cdkl5Q3UTQ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Cdkl5Q3UTQ8 Gm27325-201ENSMUST00000175467 74 ntBASIC33.27■■■□□ 2.92
Cdkl5Q3UTQ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
Cdkl5Q3UTQ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.22■■■□□ 2.91
Cdkl5Q3UTQ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cdkl5Q3UTQ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.17■■■□□ 2.9
Cdkl5Q3UTQ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cdkl5Q3UTQ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.04■■■□□ 2.88
Cdkl5Q3UTQ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Cdkl5Q3UTQ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Cdkl5Q3UTQ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Cdkl5Q3UTQ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
Cdkl5Q3UTQ8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.82■■■□□ 2.85
Cdkl5Q3UTQ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cdkl5Q3UTQ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cdkl5Q3UTQ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cdkl5Q3UTQ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cdkl5Q3UTQ8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cdkl5Q3UTQ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.57■■■□□ 2.8
Cdkl5Q3UTQ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cdkl5Q3UTQ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
Cdkl5Q3UTQ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.55■■■□□ 2.8
Cdkl5Q3UTQ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.54■■■□□ 2.8
Cdkl5Q3UTQ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Cdkl5Q3UTQ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cdkl5Q3UTQ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Cdkl5Q3UTQ8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Cdkl5Q3UTQ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cdkl5Q3UTQ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Cdkl5Q3UTQ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Cdkl5Q3UTQ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Cdkl5Q3UTQ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cdkl5Q3UTQ8 Rab21-202ENSMUST00000218831 843 ntBASIC32.28■■■□□ 2.76
Cdkl5Q3UTQ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Cdkl5Q3UTQ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.23■■■□□ 2.75
Cdkl5Q3UTQ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms